Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.47□□□□□ -2.33
TNFP01375 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.47□□□□□ -2.33
TNFP01375 RPL26P26-201ENST00000480251 434 ntBASIC0.47□□□□□ -2.33
TNFP01375 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.47□□□□□ -2.33
TNFP01375 RNU6-197P-201ENST00000516680 100 ntBASIC0.47□□□□□ -2.33
TNFP01375 RNU6-678P-201ENST00000516832 109 ntBASIC0.47□□□□□ -2.33
TNFP01375 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.47□□□□□ -2.33
TNFP01375 AP003392.2-201ENST00000527269 208 ntBASIC0.47□□□□□ -2.33
TNFP01375 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.47□□□□□ -2.33
TNFP01375 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.47□□□□□ -2.33
TNFP01375 AL583856.2-201ENST00000606298 543 ntBASIC0.47□□□□□ -2.33
TNFP01375 AL158211.4-201ENST00000606988 584 ntBASIC0.47□□□□□ -2.33
TNFP01375 Z82243.1-201ENST00000609432 473 ntBASIC0.47□□□□□ -2.33
TNFP01375 AC138627.2-201ENST00000624202 601 ntBASIC0.47□□□□□ -2.33
TNFP01375 ZNF849P-201ENST00000594711 1566 ntBASIC0.47□□□□□ -2.33
TNFP01375 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
TNFP01375 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.46□□□□□ -2.34
TNFP01375 RNU6-23P-201ENST00000363283 107 ntBASIC0.46□□□□□ -2.34
TNFP01375 RNU1-39P-201ENST00000383897 165 ntBASIC0.46□□□□□ -2.34
TNFP01375 RNU6-546P-201ENST00000383991 107 ntBASIC0.46□□□□□ -2.34
TNFP01375 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.46□□□□□ -2.34
TNFP01375 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.46□□□□□ -2.34
TNFP01375 MTND1P28-201ENST00000435623 950 ntBASIC0.46□□□□□ -2.34
TNFP01375 AL035666.1-201ENST00000446195 348 ntBASIC0.46□□□□□ -2.34
TNFP01375 AL929288.2-201ENST00000446368 407 ntBASIC0.46□□□□□ -2.34
TNFP01375 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.46□□□□□ -2.34
TNFP01375 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.46□□□□□ -2.34
TNFP01375 MTCYBP43-201ENST00000513621 740 ntBASIC0.46□□□□□ -2.34
TNFP01375 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.46□□□□□ -2.34
TNFP01375 LARP7P2-201ENST00000575306 125 ntBASIC0.46□□□□□ -2.34
TNFP01375 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.46□□□□□ -2.34
TNFP01375 MTCO2P2-201ENST00000591258 225 ntBASIC0.46□□□□□ -2.34
TNFP01375 uc_338.17-201ENST00000619633 179 ntBASIC0.46□□□□□ -2.34
TNFP01375 AC008993.2-201ENST00000631744 806 ntBASIC0.46□□□□□ -2.34
TNFP01375 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
TNFP01375 AC068700.1-201ENST00000565862 3754 ntBASIC0.46□□□□□ -2.34
TNFP01375 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.45□□□□□ -2.34
TNFP01375 MIR608-201ENST00000384820 100 ntBASIC0.45□□□□□ -2.34
TNFP01375 FTH1P15-201ENST00000406984 280 ntBASIC0.45□□□□□ -2.34
TNFP01375 UBE2V1P11-201ENST00000411559 285 ntBASIC0.45□□□□□ -2.34
TNFP01375 AL022400.1-201ENST00000423946 935 ntBASIC0.45□□□□□ -2.34
TNFP01375 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC0.45□□□□□ -2.34
TNFP01375 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
TNFP01375 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.45□□□□□ -2.34
TNFP01375 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.45□□□□□ -2.34
TNFP01375 RNU6-528P-201ENST00000516926 100 ntBASIC0.45□□□□□ -2.34
TNFP01375 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.45□□□□□ -2.34
TNFP01375 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.45□□□□□ -2.34
TNFP01375 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.45□□□□□ -2.34
TNFP01375 MZT1P2-201ENST00000604387 248 ntBASIC0.45□□□□□ -2.34
TNFP01375 AL132822.1-201ENST00000617063 513 ntBASIC0.45□□□□□ -2.34
TNFP01375 AC004808.1-201ENST00000627671 721 ntBASIC0.45□□□□□ -2.34
TNFP01375 AC010487.4-201ENST00000637027 61 ntBASIC0.45□□□□□ -2.34
TNFP01375 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
TNFP01375 MIR7-2-201ENST00000384970 110 ntBASIC0.44□□□□□ -2.34
TNFP01375 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
TNFP01375 AL161935.2-201ENST00000414627 60 ntBASIC0.44□□□□□ -2.34
TNFP01375 ZNF965P-201ENST00000432501 817 ntBASIC0.44□□□□□ -2.34
TNFP01375 UBE2V1P8-201ENST00000437166 265 ntBASIC0.44□□□□□ -2.34
TNFP01375 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.44□□□□□ -2.34
TNFP01375 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.44□□□□□ -2.34
TNFP01375 RN7SKP88-201ENST00000516847 250 ntBASIC0.44□□□□□ -2.34
TNFP01375 MRPS36P5-201ENST00000551909 298 ntBASIC0.44□□□□□ -2.34
TNFP01375 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.44□□□□□ -2.34
TNFP01375 AC005730.3-201ENST00000583067 366 ntBASIC0.44□□□□□ -2.34
TNFP01375 7SK.8-201ENST00000612110 250 ntBASIC0.44□□□□□ -2.34
TNFP01375 AC243829.6-201ENST00000612652 106 ntBASIC0.44□□□□□ -2.34
TNFP01375 AC243773.3-201ENST00000613270 256 ntBASIC0.44□□□□□ -2.34
TNFP01375 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.44□□□□□ -2.34
TNFP01375 7SK.11-201ENST00000615477 250 ntBASIC0.44□□□□□ -2.34
TNFP01375 7SK.13-201ENST00000622040 250 ntBASIC0.44□□□□□ -2.34
TNFP01375 AC138393.1-203ENST00000327086 343 ntBASIC0.43□□□□□ -2.34
TNFP01375 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
TNFP01375 AC119751.3-201ENST00000399720 670 ntBASIC0.43□□□□□ -2.34
TNFP01375 BTF3L4P3-201ENST00000418879 476 ntBASIC0.43□□□□□ -2.34
TNFP01375 FTH1P12-201ENST00000432137 551 ntBASIC0.43□□□□□ -2.34
TNFP01375 MTND2P5-201ENST00000432656 1006 ntBASIC0.43□□□□□ -2.34
TNFP01375 OR2AQ1P-201ENST00000451972 200 ntBASIC0.43□□□□□ -2.34
TNFP01375 AC134050.1-201ENST00000495088 933 ntBASIC0.43□□□□□ -2.34
TNFP01375 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
TNFP01375 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.43□□□□□ -2.34
TNFP01375 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
TNFP01375 ACA59.2-201ENST00000517061 156 ntBASIC0.43□□□□□ -2.34
TNFP01375 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.43□□□□□ -2.34
TNFP01375 AL512310.8-201ENST00000550183 120 ntBASIC0.43□□□□□ -2.34
TNFP01375 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.43□□□□□ -2.34
TNFP01375 AC095057.3-201ENST00000567102 1157 ntBASIC0.43□□□□□ -2.34
TNFP01375 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.43□□□□□ -2.34
TNFP01375 AC008751.2-201ENST00000597885 980 ntBASIC0.43□□□□□ -2.34
TNFP01375 AC011451.2-201ENST00000604303 598 ntBASIC0.43□□□□□ -2.34
TNFP01375 AL365204.3-201ENST00000612448 685 ntBASIC0.43□□□□□ -2.34
TNFP01375 AC090970.3-201ENST00000612566 866 ntBASIC0.43□□□□□ -2.34
TNFP01375 AC004009.2-201ENST00000623016 728 ntBASIC0.43□□□□□ -2.34
TNFP01375 MTND5P11-201ENST00000511037 1812 ntBASIC0.43□□□□□ -2.34
TNFP01375 Y_RNA.99-201ENST00000363138 105 ntBASIC0.42□□□□□ -2.34
TNFP01375 RNU6-112P-201ENST00000363599 104 ntBASIC0.42□□□□□ -2.34
TNFP01375 Y_RNA.205-201ENST00000364128 113 ntBASIC0.42□□□□□ -2.34
TNFP01375 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.42□□□□□ -2.34
TNFP01375 MIR193B-201ENST00000384907 83 ntBASIC0.42□□□□□ -2.34
TNFP01375 AC007435.1-201ENST00000421086 415 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms