Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RNU6-182P-201ENST00000516970 105 ntBASIC3.7□□□□□ -1.82
CNOT4O95628 IFITM8P-201ENST00000522529 394 ntBASIC3.7□□□□□ -1.82
CNOT4O95628 TRAV28-201ENST00000557548 323 ntBASIC3.7□□□□□ -1.82
CNOT4O95628 MIR4444-1-201ENST00000581696 74 ntBASIC3.7□□□□□ -1.82
CNOT4O95628 MIR4444-2-201ENST00000584390 74 ntBASIC3.7□□□□□ -1.82
CNOT4O95628 HSPE1P7-201ENST00000604681 321 ntBASIC3.7□□□□□ -1.82
CNOT4O95628 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.7□□□□□ -1.82
CNOT4O95628 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CNOT4O95628 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CNOT4O95628 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
CNOT4O95628 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CNOT4O95628 Z75746.1-201ENST00000440243 2080 ntBASIC3.69□□□□□ -1.82
CNOT4O95628 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CNOT4O95628 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.69□□□□□ -1.82
CNOT4O95628 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CNOT4O95628 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CNOT4O95628 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CNOT4O95628 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CNOT4O95628 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.69□□□□□ -1.82
CNOT4O95628 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CNOT4O95628 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
CNOT4O95628 RNU6-708P-201ENST00000384217 107 ntBASIC3.69□□□□□ -1.82
CNOT4O95628 Y_RNA.785-201ENST00000384290 109 ntBASIC3.69□□□□□ -1.82
CNOT4O95628 RNA5SP494-201ENST00000410653 129 ntBASIC3.69□□□□□ -1.82
CNOT4O95628 RNU6-1203P-201ENST00000410703 110 ntBASIC3.69□□□□□ -1.82
CNOT4O95628 AL117339.3-201ENST00000418733 162 ntBASIC3.69□□□□□ -1.82
CNOT4O95628 MYL8P-204ENST00000431574 518 ntBASIC3.69□□□□□ -1.82
CNOT4O95628 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.69□□□□□ -1.82
CNOT4O95628 AL031183.1-201ENST00000457667 207 ntBASIC3.69□□□□□ -1.82
CNOT4O95628 AC092798.1-201ENST00000458542 409 ntBASIC3.69□□□□□ -1.82
CNOT4O95628 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.69□□□□□ -1.82
CNOT4O95628 AL160314.1-201ENST00000490836 438 ntBASIC3.69□□□□□ -1.82
CNOT4O95628 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.69□□□□□ -1.82
CNOT4O95628 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.69□□□□□ -1.82
CNOT4O95628 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.69□□□□□ -1.82
CNOT4O95628 Y_RNA.700-201ENST00000516806 100 ntBASIC3.69□□□□□ -1.82
CNOT4O95628 AC091144.1-201ENST00000519573 138 ntBASIC3.69□□□□□ -1.82
CNOT4O95628 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.69□□□□□ -1.82
CNOT4O95628 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.69□□□□□ -1.82
CNOT4O95628 AC011602.1-201ENST00000546484 331 ntBASIC3.69□□□□□ -1.82
CNOT4O95628 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.69□□□□□ -1.82
CNOT4O95628 HMGB1P14-201ENST00000557424 591 ntBASIC3.69□□□□□ -1.82
CNOT4O95628 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.69□□□□□ -1.82
CNOT4O95628 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.69□□□□□ -1.82
CNOT4O95628 AC073410.2-201ENST00000603240 332 ntBASIC3.69□□□□□ -1.82
CNOT4O95628 AC009318.2-201ENST00000610917 651 ntBASIC3.69□□□□□ -1.82
CNOT4O95628 AP001282.2-201ENST00000616149 309 ntBASIC3.69□□□□□ -1.82
CNOT4O95628 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.69□□□□□ -1.82
CNOT4O95628 AC137590.2-201ENST00000619709 240 ntBASIC3.69□□□□□ -1.82
CNOT4O95628 MIR6075-201ENST00000620782 95 ntBASIC3.69□□□□□ -1.82
CNOT4O95628 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CNOT4O95628 AC073308.1-201ENST00000623696 305 ntBASIC3.69□□□□□ -1.82
CNOT4O95628 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CNOT4O95628 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CNOT4O95628 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CNOT4O95628 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CNOT4O95628 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CNOT4O95628 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.69□□□□□ -1.82
CNOT4O95628 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CNOT4O95628 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.68□□□□□ -1.82
CNOT4O95628 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.68□□□□□ -1.82
CNOT4O95628 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.68□□□□□ -1.82
CNOT4O95628 Y_RNA.27-201ENST00000362540 103 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 Y_RNA.84-201ENST00000363011 104 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 MIR548M-201ENST00000408260 86 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 RNU2-33P-201ENST00000410344 192 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 CYCSP19-201ENST00000411715 316 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.68□□□□□ -1.82
CNOT4O95628 Z85995.1-201ENST00000415547 335 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 AL356095.1-201ENST00000417217 199 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 AC096920.1-201ENST00000423991 241 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 PIGPP3-201ENST00000425307 415 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 TOMM20P4-201ENST00000427861 435 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 HLA-N-201ENST00000437516 135 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 AC004383.1-201ENST00000438135 289 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 AL451050.1-201ENST00000450126 415 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 RPL23AP45-201ENST00000476406 468 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 AC074250.1-201ENST00000511117 192 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.68□□□□□ -1.82
CNOT4O95628 AC022080.3-201ENST00000544433 482 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
CNOT4O95628 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.68□□□□□ -1.82
CNOT4O95628 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.68□□□□□ -1.82
CNOT4O95628 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.68□□□□□ -1.82
CNOT4O95628 AC006557.5-201ENST00000603126 811 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 AC024220.1-201ENST00000603675 484 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 AC009779.6-201ENST00000603972 165 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.68□□□□□ -1.82
CNOT4O95628 MIR6867-201ENST00000610636 67 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 MIR6875-201ENST00000617506 72 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 AC243829.7-201ENST00000633081 225 ntBASIC3.68□□□□□ -1.82
CNOT4O95628 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CNOT4O95628 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.68□□□□□ -1.82
CNOT4O95628 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CNOT4O95628 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.67□□□□□ -1.82
CNOT4O95628 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CNOT4O95628 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.67□□□□□ -1.82
CNOT4O95628 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CNOT4O95628 SNORD50.1-201ENST00000362987 71 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms