Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RNU2-68P-201ENST00000410878 191 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 RN7SKP101-201ENST00000411376 320 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.87□□□□□ -2.11
CTDNEP1O95476 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.87□□□□□ -2.11
CTDNEP1O95476 AL031779.1-201ENST00000415663 330 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 CYCSP48-201ENST00000417124 323 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 BX295541.1-201ENST00000417774 250 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.87□□□□□ -2.11
CTDNEP1O95476 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.87□□□□□ -2.11
CTDNEP1O95476 AC006366.1-201ENST00000422002 759 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 EIF4EP4-201ENST00000424916 578 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 RPL31P35-201ENST00000431058 377 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.87□□□□□ -2.11
CTDNEP1O95476 RPL36AP53-201ENST00000432891 316 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 MTND4P25-201ENST00000441039 533 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.87□□□□□ -2.11
CTDNEP1O95476 SNRPFP4-201ENST00000456366 242 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.87□□□□□ -2.11
CTDNEP1O95476 MTCO3P28-201ENST00000513351 515 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 RNU7-51P-201ENST00000516560 62 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 RNU6-703P-201ENST00000516946 107 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.87□□□□□ -2.11
CTDNEP1O95476 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.87□□□□□ -2.11
CTDNEP1O95476 AC011979.2-201ENST00000527568 352 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.87□□□□□ -2.11
CTDNEP1O95476 MIR3683-201ENST00000580847 82 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 MIR3199-1-201ENST00000582434 88 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 AC040904.1-201ENST00000590850 223 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 RSL24D1P11-201ENST00000591045 491 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 DUSP12P1-201ENST00000612874 516 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 AC009509.4-201ENST00000619202 509 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 SDR42E1P4-201ENST00000620894 481 ntBASIC1.87□□□□□ -2.11
CTDNEP1O95476 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.86□□□□□ -2.11
CTDNEP1O95476 Y_RNA.77-201ENST00000362962 107 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 RNU6-282P-201ENST00000365357 103 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 SNORA24.1-201ENST00000384401 135 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 Y_RNA.553-201ENST00000384670 102 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.86□□□□□ -2.11
CTDNEP1O95476 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.86□□□□□ -2.11
CTDNEP1O95476 HMGB1P27-201ENST00000431429 603 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 RPL23AP30-201ENST00000432419 501 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.86□□□□□ -2.11
CTDNEP1O95476 AL591212.2-201ENST00000433923 257 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 MTATP6P16-201ENST00000434543 526 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 MTND2P22-201ENST00000444325 1033 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 AL360221.1-201ENST00000445989 335 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 AC079448.1-201ENST00000449377 373 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 snoU109.1-201ENST00000459339 135 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 AC093534.1-201ENST00000504977 132 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 AC010424.1-201ENST00000506336 297 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.86□□□□□ -2.11
CTDNEP1O95476 Y_RNA.689-201ENST00000516589 107 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 Vault.3-201ENST00000516676 95 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 RNU6-914P-201ENST00000516749 109 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 SCARNA3-201ENST00000517097 143 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.86□□□□□ -2.11
CTDNEP1O95476 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.86□□□□□ -2.11
CTDNEP1O95476 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.86□□□□□ -2.11
CTDNEP1O95476 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.86□□□□□ -2.11
CTDNEP1O95476 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.86□□□□□ -2.11
CTDNEP1O95476 AC137800.2-201ENST00000574375 120 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 MIR4528-201ENST00000577763 90 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 AC025165.5-201ENST00000602802 578 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 AC087752.4-201ENST00000605911 462 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 AC116312.1-201ENST00000606841 314 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 MIR15A-201ENST00000607334 83 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 AL589743.7-201ENST00000612637 233 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 AC241585.2-209ENST00000638217 143 ntBASIC1.86□□□□□ -2.11
CTDNEP1O95476 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CTDNEP1O95476 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.86□□□□□ -2.11
CTDNEP1O95476 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CTDNEP1O95476 AC010889.1-201ENST00000566193 2666 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 FARSBP1-201ENST00000435808 1778 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 AL390237.1-201ENST00000404226 1415 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 NACAP2-201ENST00000318548 624 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 Y_RNA.201-201ENST00000364052 96 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 SNORD116-9-201ENST00000384000 95 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 SNORD116-3-201ENST00000384287 95 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 SNORD116-7-201ENST00000384404 95 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 SNORD116-5-201ENST00000384462 95 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 POLHP1-201ENST00000411806 470 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 BX510359.4-201ENST00000423750 193 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 AC137499.1-201ENST00000427602 88 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 RPS24P1-201ENST00000438550 371 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 AC073614.1-201ENST00000438690 650 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 RPS15AP9-201ENST00000439856 381 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 AL136380.1-201ENST00000447970 162 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 AC093899.1-201ENST00000457984 376 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 snoU13.26-201ENST00000459452 105 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 KLF3P2-201ENST00000465138 268 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 DYNLL1P5-201ENST00000467158 270 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.85□□□□□ -2.11
CTDNEP1O95476 AC109927.2-201ENST00000506416 303 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 ARL2BPP4-201ENST00000506854 471 ntBASIC1.85□□□□□ -2.11
CTDNEP1O95476 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.85□□□□□ -2.11
CTDNEP1O95476 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.85□□□□□ -2.11
CTDNEP1O95476 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.85□□□□□ -2.11
CTDNEP1O95476 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.85□□□□□ -2.11
CTDNEP1O95476 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.85□□□□□ -2.11
CTDNEP1O95476 AP002453.2-201ENST00000533503 320 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms