Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.94□□□□□ -1.94
RTN3O95197 AC012557.2-201ENST00000605919 418 ntBASIC2.94□□□□□ -1.94
RTN3O95197 uc_338.34-201ENST00000617467 174 ntBASIC2.94□□□□□ -1.94
RTN3O95197 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.94□□□□□ -1.94
RTN3O95197 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RTN3O95197 MIR3529-201ENST00000637713 78 ntBASIC2.94□□□□□ -1.94
RTN3O95197 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
RTN3O95197 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.94□□□□□ -1.94
RTN3O95197 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.94□□□□□ -1.94
RTN3O95197 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.94□□□□□ -1.94
RTN3O95197 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.93□□□□□ -1.94
RTN3O95197 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
RTN3O95197 Y_RNA.324-201ENST00000365165 102 ntBASIC2.93□□□□□ -1.94
RTN3O95197 SNORA69-201ENST00000383895 132 ntBASIC2.93□□□□□ -1.94
RTN3O95197 MIR9-1-201ENST00000385198 89 ntBASIC2.93□□□□□ -1.94
RTN3O95197 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
RTN3O95197 SNORD37.1-201ENST00000390968 65 ntBASIC2.93□□□□□ -1.94
RTN3O95197 AL138827.1-201ENST00000402666 306 ntBASIC2.93□□□□□ -1.94
RTN3O95197 RNU2-25P-201ENST00000411041 191 ntBASIC2.93□□□□□ -1.94
RTN3O95197 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.93□□□□□ -1.94
RTN3O95197 Z98742.2-201ENST00000431564 187 ntBASIC2.93□□□□□ -1.94
RTN3O95197 RPS29P6-201ENST00000438196 145 ntBASIC2.93□□□□□ -1.94
RTN3O95197 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.93□□□□□ -1.94
RTN3O95197 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.93□□□□□ -1.94
RTN3O95197 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.93□□□□□ -1.94
RTN3O95197 RN7SL297P-201ENST00000483161 293 ntBASIC2.93□□□□□ -1.94
RTN3O95197 RPL22P13-201ENST00000493291 347 ntBASIC2.93□□□□□ -1.94
RTN3O95197 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.93□□□□□ -1.94
RTN3O95197 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.93□□□□□ -1.94
RTN3O95197 RN7SKP132-201ENST00000516001 208 ntBASIC2.93□□□□□ -1.94
RTN3O95197 SNORA31.15-201ENST00000516771 132 ntBASIC2.93□□□□□ -1.94
RTN3O95197 RPL7P20-201ENST00000520308 745 ntBASIC2.93□□□□□ -1.94
RTN3O95197 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.93□□□□□ -1.94
RTN3O95197 MTND4P7-201ENST00000523876 130 ntBASIC2.93□□□□□ -1.94
RTN3O95197 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.93□□□□□ -1.94
RTN3O95197 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.93□□□□□ -1.94
RTN3O95197 CR383656.8-201ENST00000549046 145 ntBASIC2.93□□□□□ -1.94
RTN3O95197 AL512360.1-201ENST00000555346 234 ntBASIC2.93□□□□□ -1.94
RTN3O95197 HMGB1P33-201ENST00000563485 527 ntBASIC2.93□□□□□ -1.94
RTN3O95197 AC008121.1-201ENST00000603244 268 ntBASIC2.93□□□□□ -1.94
RTN3O95197 U2.17-201ENST00000611454 95 ntBASIC2.93□□□□□ -1.94
RTN3O95197 AC010297.1-201ENST00000623948 149 ntBASIC2.93□□□□□ -1.94
RTN3O95197 AP003400.5-201ENST00000624827 617 ntBASIC2.93□□□□□ -1.94
RTN3O95197 AC092593.1-201ENST00000515413 1815 ntBASIC2.93□□□□□ -1.94
RTN3O95197 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RTN3O95197 HAUS6P2-201ENST00000433254 2404 ntBASIC2.92□□□□□ -1.94
RTN3O95197 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
RTN3O95197 MIR26A1-201ENST00000362205 77 ntBASIC2.92□□□□□ -1.94
RTN3O95197 RNU6-486P-201ENST00000363116 107 ntBASIC2.92□□□□□ -1.94
RTN3O95197 RNU6-1303P-201ENST00000364841 107 ntBASIC2.92□□□□□ -1.94
RTN3O95197 RNA5SP126-201ENST00000365092 109 ntBASIC2.92□□□□□ -1.94
RTN3O95197 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.92□□□□□ -1.94
RTN3O95197 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.92□□□□□ -1.94
RTN3O95197 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RTN3O95197 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.92□□□□□ -1.94
RTN3O95197 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.92□□□□□ -1.94
RTN3O95197 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.92□□□□□ -1.94
RTN3O95197 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.92□□□□□ -1.94
RTN3O95197 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.92□□□□□ -1.94
RTN3O95197 RNU6-314P-201ENST00000516574 104 ntBASIC2.92□□□□□ -1.94
RTN3O95197 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.92□□□□□ -1.94
RTN3O95197 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.92□□□□□ -1.94
RTN3O95197 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.92□□□□□ -1.94
RTN3O95197 MIR5583-1-201ENST00000580941 59 ntBASIC2.92□□□□□ -1.94
RTN3O95197 MIR3199-1-201ENST00000582434 88 ntBASIC2.92□□□□□ -1.94
RTN3O95197 MIR4672-201ENST00000583126 81 ntBASIC2.92□□□□□ -1.94
RTN3O95197 ZNF861P-201ENST00000588126 639 ntBASIC2.92□□□□□ -1.94
RTN3O95197 AL356280.1-201ENST00000603614 379 ntBASIC2.92□□□□□ -1.94
RTN3O95197 AC006023.1-201ENST00000603944 259 ntBASIC2.92□□□□□ -1.94
RTN3O95197 AL049779.4-201ENST00000604500 156 ntBASIC2.92□□□□□ -1.94
RTN3O95197 AC092954.2-201ENST00000609103 430 ntBASIC2.92□□□□□ -1.94
RTN3O95197 Z82243.1-201ENST00000609432 473 ntBASIC2.92□□□□□ -1.94
RTN3O95197 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.92□□□□□ -1.94
RTN3O95197 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.92□□□□□ -1.94
RTN3O95197 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RTN3O95197 MTND4P27-201ENST00000450813 1354 ntBASIC2.91□□□□□ -1.94
RTN3O95197 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
RTN3O95197 Y_RNA.3-201ENST00000362331 103 ntBASIC2.91□□□□□ -1.94
RTN3O95197 RNU5E-7P-201ENST00000365290 117 ntBASIC2.91□□□□□ -1.94
RTN3O95197 RNA5SP21-201ENST00000410917 96 ntBASIC2.91□□□□□ -1.94
RTN3O95197 RNA5SP184-201ENST00000411071 108 ntBASIC2.91□□□□□ -1.94
RTN3O95197 AC063976.3-201ENST00000426849 329 ntBASIC2.91□□□□□ -1.94
RTN3O95197 HMGB1P31-201ENST00000437242 427 ntBASIC2.91□□□□□ -1.94
RTN3O95197 AL445687.1-201ENST00000439946 251 ntBASIC2.91□□□□□ -1.94
RTN3O95197 RNU7-167P-201ENST00000459160 62 ntBASIC2.91□□□□□ -1.94
RTN3O95197 RPL36AP48-201ENST00000485521 314 ntBASIC2.91□□□□□ -1.94
RTN3O95197 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.91□□□□□ -1.94
RTN3O95197 AC023141.11-201ENST00000508864 202 ntBASIC2.91□□□□□ -1.94
RTN3O95197 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.91□□□□□ -1.94
RTN3O95197 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.91□□□□□ -1.94
RTN3O95197 SNORA43.2-201ENST00000516652 128 ntBASIC2.91□□□□□ -1.94
RTN3O95197 SCARNA3-201ENST00000517097 143 ntBASIC2.91□□□□□ -1.94
RTN3O95197 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.91□□□□□ -1.94
RTN3O95197 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.91□□□□□ -1.94
RTN3O95197 MIR4424-201ENST00000585257 86 ntBASIC2.91□□□□□ -1.94
RTN3O95197 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.91□□□□□ -1.94
RTN3O95197 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.91□□□□□ -1.94
RTN3O95197 AL020991.1-201ENST00000612314 373 ntBASIC2.91□□□□□ -1.94
RTN3O95197 RMST_7.1-201ENST00000621935 268 ntBASIC2.91□□□□□ -1.94
RTN3O95197 Z69720.2-201ENST00000624755 279 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms