Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 RNU6-601P-201ENST00000384540 107 ntBASIC2.91□□□□□ -1.94
LDB3O75112 MIR325-201ENST00000385260 98 ntBASIC2.91□□□□□ -1.94
LDB3O75112 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.91□□□□□ -1.94
LDB3O75112 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
LDB3O75112 AC092047.1-201ENST00000424997 240 ntBASIC2.91□□□□□ -1.94
LDB3O75112 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.91□□□□□ -1.94
LDB3O75112 RPS27P29-201ENST00000463110 252 ntBASIC2.91□□□□□ -1.94
LDB3O75112 AL135752.1-201ENST00000479477 471 ntBASIC2.91□□□□□ -1.94
LDB3O75112 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.91□□□□□ -1.94
LDB3O75112 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.91□□□□□ -1.94
LDB3O75112 AC104136.1-201ENST00000512969 394 ntBASIC2.91□□□□□ -1.94
LDB3O75112 SMURF2P1-201ENST00000514992 481 ntBASIC2.91□□□□□ -1.94
LDB3O75112 SNORA14.1-201ENST00000516113 141 ntBASIC2.91□□□□□ -1.94
LDB3O75112 RNU6-1332P-201ENST00000516666 104 ntBASIC2.91□□□□□ -1.94
LDB3O75112 RN7SKP57-201ENST00000517248 293 ntBASIC2.91□□□□□ -1.94
LDB3O75112 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.91□□□□□ -1.94
LDB3O75112 MIR5195-201ENST00000583555 115 ntBASIC2.91□□□□□ -1.94
LDB3O75112 AC012493.2-201ENST00000595083 291 ntBASIC2.91□□□□□ -1.94
LDB3O75112 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.91□□□□□ -1.94
LDB3O75112 AC098657.3-201ENST00000620434 263 ntBASIC2.91□□□□□ -1.94
LDB3O75112 AL512643.1-201ENST00000635735 524 ntBASIC2.91□□□□□ -1.94
LDB3O75112 KPNA2P1-201ENST00000458289 1591 ntBASIC2.91□□□□□ -1.94
LDB3O75112 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
LDB3O75112 MTND5P30-201ENST00000452896 1731 ntBASIC2.9□□□□□ -1.94
LDB3O75112 AL359693.1-201ENST00000614959 2407 ntBASIC2.9□□□□□ -1.94
LDB3O75112 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
LDB3O75112 AC138393.1-203ENST00000327086 343 ntBASIC2.9□□□□□ -1.95
LDB3O75112 RNU6-1115P-201ENST00000362490 106 ntBASIC2.9□□□□□ -1.95
LDB3O75112 Y_RNA.28-201ENST00000362554 111 ntBASIC2.9□□□□□ -1.95
LDB3O75112 Y_RNA.144-201ENST00000363521 113 ntBASIC2.9□□□□□ -1.95
LDB3O75112 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
LDB3O75112 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
LDB3O75112 Y_RNA.399-201ENST00000383955 105 ntBASIC2.9□□□□□ -1.95
LDB3O75112 RNU6-393P-201ENST00000384475 107 ntBASIC2.9□□□□□ -1.95
LDB3O75112 RNU6-1105P-201ENST00000384774 107 ntBASIC2.9□□□□□ -1.95
LDB3O75112 MIR568-201ENST00000385036 95 ntBASIC2.9□□□□□ -1.95
LDB3O75112 RNU1-101P-201ENST00000391171 127 ntBASIC2.9□□□□□ -1.95
LDB3O75112 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
LDB3O75112 RPLP0P7-201ENST00000416050 667 ntBASIC2.9□□□□□ -1.95
LDB3O75112 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.9□□□□□ -1.95
LDB3O75112 RPS12P18-201ENST00000442381 270 ntBASIC2.9□□□□□ -1.95
LDB3O75112 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.9□□□□□ -1.95
LDB3O75112 FABP5P15-201ENST00000453566 214 ntBASIC2.9□□□□□ -1.95
LDB3O75112 Y_RNA.653-201ENST00000459091 95 ntBASIC2.9□□□□□ -1.95
LDB3O75112 RNU7-167P-201ENST00000459160 62 ntBASIC2.9□□□□□ -1.95
LDB3O75112 RN7SL330P-201ENST00000469709 307 ntBASIC2.9□□□□□ -1.95
LDB3O75112 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.9□□□□□ -1.95
LDB3O75112 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.9□□□□□ -1.95
LDB3O75112 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.9□□□□□ -1.95
LDB3O75112 MTCO3P23-201ENST00000561363 289 ntBASIC2.9□□□□□ -1.95
LDB3O75112 AMZ2P1-203ENST00000565833 850 ntBASIC2.9□□□□□ -1.95
LDB3O75112 MIR1273C-201ENST00000578669 77 ntBASIC2.9□□□□□ -1.95
LDB3O75112 MIR3671-201ENST00000580455 88 ntBASIC2.9□□□□□ -1.95
LDB3O75112 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.9□□□□□ -1.95
LDB3O75112 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.9□□□□□ -1.95
LDB3O75112 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.9□□□□□ -1.95
LDB3O75112 AC136601.2-201ENST00000604356 474 ntBASIC2.9□□□□□ -1.95
LDB3O75112 MIR8057-201ENST00000620957 69 ntBASIC2.9□□□□□ -1.95
LDB3O75112 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
LDB3O75112 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.9□□□□□ -1.95
LDB3O75112 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
LDB3O75112 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.9□□□□□ -1.95
LDB3O75112 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
LDB3O75112 AC022336.2-201ENST00000568966 2538 ntBASIC2.89□□□□□ -1.95
LDB3O75112 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.89□□□□□ -1.95
LDB3O75112 AC233263.6-201ENST00000631132 1963 ntBASIC2.89□□□□□ -1.95
LDB3O75112 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.89□□□□□ -1.95
LDB3O75112 MIR148B-201ENST00000362252 99 ntBASIC2.89□□□□□ -1.95
LDB3O75112 U3.6-201ENST00000363622 211 ntBASIC2.89□□□□□ -1.95
LDB3O75112 RNU6-371P-201ENST00000364283 108 ntBASIC2.89□□□□□ -1.95
LDB3O75112 RNU6-890P-201ENST00000384121 107 ntBASIC2.89□□□□□ -1.95
LDB3O75112 RNU6-434P-201ENST00000384376 107 ntBASIC2.89□□□□□ -1.95
LDB3O75112 Y_RNA.482-201ENST00000384377 111 ntBASIC2.89□□□□□ -1.95
LDB3O75112 RNU6-306P-201ENST00000384617 107 ntBASIC2.89□□□□□ -1.95
LDB3O75112 RNA5SP252-201ENST00000391131 119 ntBASIC2.89□□□□□ -1.95
LDB3O75112 EI24P2-201ENST00000397776 1076 ntBASIC2.89□□□□□ -1.95
LDB3O75112 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.89□□□□□ -1.95
LDB3O75112 AL358176.2-201ENST00000425769 204 ntBASIC2.89□□□□□ -1.95
LDB3O75112 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.89□□□□□ -1.95
LDB3O75112 RPL21P41-201ENST00000459863 264 ntBASIC2.89□□□□□ -1.95
LDB3O75112 MTND5P16-201ENST00000460269 1703 ntBASIC2.89□□□□□ -1.95
LDB3O75112 RPL7P42-201ENST00000481005 679 ntBASIC2.89□□□□□ -1.95
LDB3O75112 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.89□□□□□ -1.95
LDB3O75112 SUMO2P6-201ENST00000505273 288 ntBASIC2.89□□□□□ -1.95
LDB3O75112 RPL39P5-202ENST00000512505 151 ntBASIC2.89□□□□□ -1.95
LDB3O75112 AC026782.1-201ENST00000512952 449 ntBASIC2.89□□□□□ -1.95
LDB3O75112 AC008885.1-201ENST00000514930 301 ntBASIC2.89□□□□□ -1.95
LDB3O75112 Y_RNA.670-201ENST00000516255 105 ntBASIC2.89□□□□□ -1.95
LDB3O75112 RNU6-1315P-201ENST00000517187 99 ntBASIC2.89□□□□□ -1.95
LDB3O75112 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.89□□□□□ -1.95
LDB3O75112 AP000867.2-201ENST00000532468 320 ntBASIC2.89□□□□□ -1.95
LDB3O75112 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.89□□□□□ -1.95
LDB3O75112 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.89□□□□□ -1.95
LDB3O75112 MIR5692A1-201ENST00000580523 69 ntBASIC2.89□□□□□ -1.95
LDB3O75112 AC100830.2-201ENST00000581636 240 ntBASIC2.89□□□□□ -1.95
LDB3O75112 AC073539.2-201ENST00000597113 165 ntBASIC2.89□□□□□ -1.95
LDB3O75112 AC012119.1-201ENST00000603184 222 ntBASIC2.89□□□□□ -1.95
LDB3O75112 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.89□□□□□ -1.95
LDB3O75112 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.89□□□□□ -1.95
LDB3O75112 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms