Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.79□□□□□ -1.96
ZIC3O60481 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.79□□□□□ -1.96
ZIC3O60481 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.79□□□□□ -1.96
ZIC3O60481 AC128713.1-201ENST00000471495 306 ntBASIC2.79□□□□□ -1.96
ZIC3O60481 MTND4LP22-201ENST00000508209 276 ntBASIC2.79□□□□□ -1.96
ZIC3O60481 RNA5SP217-201ENST00000515959 91 ntBASIC2.79□□□□□ -1.96
ZIC3O60481 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.79□□□□□ -1.96
ZIC3O60481 AC007151.1-201ENST00000572774 483 ntBASIC2.79□□□□□ -1.96
ZIC3O60481 MIR4790-201ENST00000577799 79 ntBASIC2.79□□□□□ -1.96
ZIC3O60481 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.79□□□□□ -1.96
ZIC3O60481 AC008121.1-201ENST00000603244 268 ntBASIC2.79□□□□□ -1.96
ZIC3O60481 AC064836.2-201ENST00000609491 462 ntBASIC2.79□□□□□ -1.96
ZIC3O60481 AL359314.1-201ENST00000616913 261 ntBASIC2.79□□□□□ -1.96
ZIC3O60481 AC010378.1-201ENST00000619270 362 ntBASIC2.79□□□□□ -1.96
ZIC3O60481 SCARNA4-202ENST00000625402 129 ntBASIC2.79□□□□□ -1.96
ZIC3O60481 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
ZIC3O60481 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.79□□□□□ -1.96
ZIC3O60481 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ZIC3O60481 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.79□□□□□ -1.96
ZIC3O60481 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
ZIC3O60481 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
ZIC3O60481 RNU6-942P-201ENST00000363002 107 ntBASIC2.78□□□□□ -1.96
ZIC3O60481 RNU6-805P-201ENST00000365643 106 ntBASIC2.78□□□□□ -1.96
ZIC3O60481 RNU6-95P-201ENST00000384697 107 ntBASIC2.78□□□□□ -1.96
ZIC3O60481 SNORA48.5-201ENST00000391143 135 ntBASIC2.78□□□□□ -1.96
ZIC3O60481 RN7SKP158-201ENST00000410453 326 ntBASIC2.78□□□□□ -1.96
ZIC3O60481 RNA5SP293-201ENST00000410527 113 ntBASIC2.78□□□□□ -1.96
ZIC3O60481 AC074085.1-201ENST00000413598 418 ntBASIC2.78□□□□□ -1.96
ZIC3O60481 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.78□□□□□ -1.96
ZIC3O60481 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.78□□□□□ -1.96
ZIC3O60481 UBE2V1P4-201ENST00000425374 344 ntBASIC2.78□□□□□ -1.96
ZIC3O60481 AC093151.1-201ENST00000427711 313 ntBASIC2.78□□□□□ -1.96
ZIC3O60481 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.78□□□□□ -1.96
ZIC3O60481 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.78□□□□□ -1.96
ZIC3O60481 SNAP23P1-201ENST00000433229 246 ntBASIC2.78□□□□□ -1.96
ZIC3O60481 RPS3AP52-201ENST00000435639 297 ntBASIC2.78□□□□□ -1.96
ZIC3O60481 HIGD1AP11-201ENST00000438361 280 ntBASIC2.78□□□□□ -1.96
ZIC3O60481 BTF3P15-201ENST00000455606 336 ntBASIC2.78□□□□□ -1.96
ZIC3O60481 AL031183.1-201ENST00000457667 207 ntBASIC2.78□□□□□ -1.96
ZIC3O60481 RPL27AP5-201ENST00000469428 449 ntBASIC2.78□□□□□ -1.96
ZIC3O60481 MTND4P17-201ENST00000470444 350 ntBASIC2.78□□□□□ -1.96
ZIC3O60481 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.78□□□□□ -1.96
ZIC3O60481 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.78□□□□□ -1.96
ZIC3O60481 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.78□□□□□ -1.96
ZIC3O60481 AC093027.1-201ENST00000546698 429 ntBASIC2.78□□□□□ -1.96
ZIC3O60481 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.78□□□□□ -1.96
ZIC3O60481 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.78□□□□□ -1.96
ZIC3O60481 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.78□□□□□ -1.96
ZIC3O60481 MIR4325-201ENST00000583049 90 ntBASIC2.78□□□□□ -1.96
ZIC3O60481 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
ZIC3O60481 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.78□□□□□ -1.96
ZIC3O60481 AP000787.2-201ENST00000604432 568 ntBASIC2.78□□□□□ -1.96
ZIC3O60481 AC005000.2-201ENST00000605468 310 ntBASIC2.78□□□□□ -1.96
ZIC3O60481 AL161629.2-201ENST00000615347 275 ntBASIC2.78□□□□□ -1.96
ZIC3O60481 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.78□□□□□ -1.96
ZIC3O60481 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
ZIC3O60481 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.77□□□□□ -1.97
ZIC3O60481 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ZIC3O60481 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
ZIC3O60481 AL353743.1-202ENST00000431724 1695 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 MIR22-201ENST00000362190 85 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 RNU6-525P-201ENST00000363685 104 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 RNU1-100P-201ENST00000365255 165 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ZIC3O60481 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.77□□□□□ -1.97
ZIC3O60481 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ZIC3O60481 MIR483-201ENST00000385070 76 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 RPL32P35-201ENST00000415214 394 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 AL117339.3-201ENST00000418733 162 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 AC245291.1-201ENST00000419501 328 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 AL139396.1-201ENST00000421137 167 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 AL365496.1-201ENST00000426885 215 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 AL645568.3-201ENST00000433683 316 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.77□□□□□ -1.97
ZIC3O60481 HIGD1AP2-201ENST00000446367 280 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 AC013470.1-201ENST00000453438 462 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 AC130509.1-201ENST00000464158 433 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 AP002884.2-201ENST00000471647 395 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.77□□□□□ -1.97
ZIC3O60481 AC096745.1-201ENST00000509945 370 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 AC113155.1-201ENST00000511141 769 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.77□□□□□ -1.97
ZIC3O60481 RNA5SP341-201ENST00000516261 117 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 SNORA31.21-201ENST00000517180 77 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 RNU6-711P-201ENST00000517255 106 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ZIC3O60481 AC104576.1-201ENST00000524225 88 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.77□□□□□ -1.97
ZIC3O60481 AC006199.1-201ENST00000548728 219 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.77□□□□□ -1.97
ZIC3O60481 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 AL355375.2-201ENST00000574825 175 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 MIR4795-201ENST00000584182 89 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 AC069234.5-201ENST00000611056 416 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 AL162274.2-201ENST00000614406 332 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 MIR1302-1-201ENST00000637932 143 ntBASIC2.77□□□□□ -1.97
ZIC3O60481 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
ZIC3O60481 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms