Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.15□□□□□ -1.75
SRGAP3O43295 AC093852.1-201ENST00000503587 266 ntBASIC4.15□□□□□ -1.75
SRGAP3O43295 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.15□□□□□ -1.75
SRGAP3O43295 APOOP4-201ENST00000513530 597 ntBASIC4.15□□□□□ -1.75
SRGAP3O43295 RNU6-143P-201ENST00000516942 93 ntBASIC4.15□□□□□ -1.75
SRGAP3O43295 RNA5SP471-201ENST00000516971 106 ntBASIC4.15□□□□□ -1.75
SRGAP3O43295 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.15□□□□□ -1.75
SRGAP3O43295 AC007375.1-201ENST00000554513 578 ntBASIC4.15□□□□□ -1.75
SRGAP3O43295 AC090517.1-201ENST00000569307 266 ntBASIC4.15□□□□□ -1.75
SRGAP3O43295 MIR3944-201ENST00000581277 108 ntBASIC4.15□□□□□ -1.75
SRGAP3O43295 VN1R91P-201ENST00000594377 169 ntBASIC4.15□□□□□ -1.75
SRGAP3O43295 AL162713.1-201ENST00000604480 262 ntBASIC4.15□□□□□ -1.75
SRGAP3O43295 AC012468.1-201ENST00000604888 430 ntBASIC4.15□□□□□ -1.75
SRGAP3O43295 U6.104-201ENST00000637979 90 ntBASIC4.15□□□□□ -1.75
SRGAP3O43295 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.15□□□□□ -1.75
SRGAP3O43295 AL133383.2-201ENST00000622958 2336 ntBASIC4.15□□□□□ -1.75
SRGAP3O43295 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SRGAP3O43295 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SRGAP3O43295 Y_RNA.14-201ENST00000362415 103 ntBASIC4.14□□□□□ -1.75
SRGAP3O43295 RNU1-70P-201ENST00000362618 164 ntBASIC4.14□□□□□ -1.75
SRGAP3O43295 RNU5A-1-201ENST00000362698 116 ntBASIC4.14□□□□□ -1.75
SRGAP3O43295 RNU4-50P-201ENST00000364361 141 ntBASIC4.14□□□□□ -1.75
SRGAP3O43295 SNORA20.1-201ENST00000364790 130 ntBASIC4.14□□□□□ -1.75
SRGAP3O43295 MIR548I3-201ENST00000408378 149 ntBASIC4.14□□□□□ -1.75
SRGAP3O43295 MIR548I1-201ENST00000408810 149 ntBASIC4.14□□□□□ -1.75
SRGAP3O43295 AC079780.1-201ENST00000428259 207 ntBASIC4.14□□□□□ -1.75
SRGAP3O43295 AC005326.1-201ENST00000429197 123 ntBASIC4.14□□□□□ -1.75
SRGAP3O43295 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.14□□□□□ -1.75
SRGAP3O43295 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.14□□□□□ -1.75
SRGAP3O43295 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.14□□□□□ -1.75
SRGAP3O43295 AL049874.1-201ENST00000489560 388 ntBASIC4.14□□□□□ -1.75
SRGAP3O43295 RNU1-86P-201ENST00000516108 154 ntBASIC4.14□□□□□ -1.75
SRGAP3O43295 RNU6-927P-201ENST00000516199 100 ntBASIC4.14□□□□□ -1.75
SRGAP3O43295 RNU1-107P-201ENST00000516617 154 ntBASIC4.14□□□□□ -1.75
SRGAP3O43295 RNU6-570P-201ENST00000517051 105 ntBASIC4.14□□□□□ -1.75
SRGAP3O43295 RNU6-1315P-201ENST00000517187 99 ntBASIC4.14□□□□□ -1.75
SRGAP3O43295 AC144568.1-201ENST00000520139 137 ntBASIC4.14□□□□□ -1.75
SRGAP3O43295 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.14□□□□□ -1.75
SRGAP3O43295 AL121603.1-201ENST00000553815 142 ntBASIC4.14□□□□□ -1.75
SRGAP3O43295 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.14□□□□□ -1.75
SRGAP3O43295 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SRGAP3O43295 SNORD84-203ENST00000584275 78 ntBASIC4.14□□□□□ -1.75
SRGAP3O43295 AC002545.1-201ENST00000592511 181 ntBASIC4.14□□□□□ -1.75
SRGAP3O43295 AC096772.1-201ENST00000609146 564 ntBASIC4.14□□□□□ -1.75
SRGAP3O43295 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.14□□□□□ -1.75
SRGAP3O43295 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SRGAP3O43295 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SRGAP3O43295 Z83843.1-201ENST00000604070 3685 ntBASIC4.14□□□□□ -1.75
SRGAP3O43295 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SRGAP3O43295 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.14□□□□□ -1.75
SRGAP3O43295 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SRGAP3O43295 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SRGAP3O43295 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SRGAP3O43295 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SRGAP3O43295 AC017071.1-201ENST00000564407 2204 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SRGAP3O43295 Y_RNA.19-201ENST00000362462 99 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 SNORD46.1-201ENST00000364139 104 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 RNU6-1317P-201ENST00000364582 104 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 Y_RNA.515-201ENST00000384535 112 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 MIR184-201ENST00000384962 84 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 AL513331.1-201ENST00000411908 397 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 EI24P1-201ENST00000416584 867 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 AL159169.1-201ENST00000421119 127 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 AL158156.1-201ENST00000422509 473 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 USP9YP7-201ENST00000436723 430 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.13□□□□□ -1.75
SRGAP3O43295 USP9YP32-201ENST00000452432 430 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 RPL39P38-201ENST00000467018 153 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 AC022493.1-201ENST00000492984 337 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 HMGB1P35-201ENST00000503360 598 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 MIR892C-201ENST00000516410 77 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SRGAP3O43295 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.13□□□□□ -1.75
SRGAP3O43295 AL157871.3-201ENST00000557231 293 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 CPDP1-201ENST00000579660 283 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.13□□□□□ -1.75
SRGAP3O43295 RPS29P30-201ENST00000600975 111 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 AL158827.2-201ENST00000602494 330 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 AL390123.1-201ENST00000603216 237 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 RMST_8.1-201ENST00000610287 165 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 MIR8058-201ENST00000615737 89 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 AC141273.2-201ENST00000618989 130 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 AL691447.3-201ENST00000635020 330 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 AC009812.4-201ENST00000569134 1805 ntBASIC4.13□□□□□ -1.75
SRGAP3O43295 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SRGAP3O43295 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SRGAP3O43295 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SRGAP3O43295 AC090971.4-201ENST00000560291 1800 ntBASIC4.12□□□□□ -1.75
SRGAP3O43295 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
SRGAP3O43295 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SRGAP3O43295 MIR521-1-201ENST00000384902 87 ntBASIC4.12□□□□□ -1.75
SRGAP3O43295 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.12□□□□□ -1.75
SRGAP3O43295 AC133134.1-201ENST00000466800 359 ntBASIC4.12□□□□□ -1.75
SRGAP3O43295 RN7SL601P-201ENST00000471221 293 ntBASIC4.12□□□□□ -1.75
SRGAP3O43295 HSPE1P6-201ENST00000479457 291 ntBASIC4.12□□□□□ -1.75
SRGAP3O43295 AC021205.2-201ENST00000480069 347 ntBASIC4.12□□□□□ -1.75
SRGAP3O43295 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.12□□□□□ -1.75
SRGAP3O43295 RPL7P47-201ENST00000497299 556 ntBASIC4.12□□□□□ -1.75
SRGAP3O43295 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms