Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 uc_338.12-201ENST00000616344 181 ntBASIC0.99□□□□□ -2.25
SDCBPO00560 AL353770.2-201ENST00000620024 78 ntBASIC0.99□□□□□ -2.25
SDCBPO00560 AC090517.3-201ENST00000625170 141 ntBASIC0.99□□□□□ -2.25
SDCBPO00560 MTND5P42-201ENST00000637720 498 ntBASIC0.99□□□□□ -2.25
SDCBPO00560 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SDCBPO00560 ZNF29P-201ENST00000225587 168 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SDCBPO00560 MIR26B-201ENST00000362251 77 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 RNU6-858P-201ENST00000362436 107 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 RNU6-1010P-201ENST00000362757 107 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 Y_RNA.192-201ENST00000363977 102 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.98□□□□□ -2.25
SDCBPO00560 RNU6-611P-201ENST00000384276 104 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 SNORD116-12-201ENST00000384468 92 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 RNA5SP100-201ENST00000410903 110 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 RNA5SP59-201ENST00000410922 110 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 RNU2-72P-201ENST00000411175 163 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 AC069282.1-201ENST00000411911 526 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 RAC1P6-201ENST00000423911 575 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.98□□□□□ -2.25
SDCBPO00560 TXNL1P1-201ENST00000429528 554 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 AL606517.1-201ENST00000446914 387 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 AL590365.1-201ENST00000450788 243 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.98□□□□□ -2.25
SDCBPO00560 RNVU1-2-201ENST00000516326 135 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 RNU6-914P-201ENST00000516749 109 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 AP000907.2-201ENST00000530827 353 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.98□□□□□ -2.25
SDCBPO00560 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.98□□□□□ -2.25
SDCBPO00560 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.98□□□□□ -2.25
SDCBPO00560 SUB1P3-201ENST00000564581 315 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 AC104984.5-201ENST00000586878 94 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 VN1R80P-201ENST00000597126 338 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.98□□□□□ -2.25
SDCBPO00560 AP001981.2-201ENST00000603241 418 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 AC097468.3-201ENST00000607956 456 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.98□□□□□ -2.25
SDCBPO00560 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.98□□□□□ -2.25
SDCBPO00560 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
SDCBPO00560 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
SDCBPO00560 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SDCBPO00560 MIR378A-201ENST00000362177 66 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 RNU1-58P-201ENST00000362413 163 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 SNORD3E-201ENST00000362899 217 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 SNORD116.1-201ENST00000365628 92 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 RNU6-546P-201ENST00000383991 107 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 RNU6-413P-201ENST00000384115 107 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 RNU6-843P-201ENST00000384454 104 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
SDCBPO00560 ERHP2-201ENST00000402323 299 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 RNU2-36P-201ENST00000410361 191 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 OR6C66P-201ENST00000414917 930 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AC138623.1-201ENST00000418060 216 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AL591704.2-201ENST00000421658 181 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.97□□□□□ -2.25
SDCBPO00560 AL591704.1-201ENST00000432574 275 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.97□□□□□ -2.25
SDCBPO00560 TIMM9P1-201ENST00000436122 256 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.97□□□□□ -2.25
SDCBPO00560 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.97□□□□□ -2.25
SDCBPO00560 AL121594.1-201ENST00000475906 575 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AP001025.1-201ENST00000486139 332 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AC109927.2-201ENST00000506416 303 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 RNU6-143P-201ENST00000516942 93 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AL356057.1-201ENST00000533798 831 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.97□□□□□ -2.25
SDCBPO00560 AL157871.3-201ENST00000557231 293 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.97□□□□□ -2.25
SDCBPO00560 AC023043.2-201ENST00000589678 1026 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AL670379.6-201ENST00000603753 252 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 MTND3P19-201ENST00000603825 345 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AL670379.11-201ENST00000604059 253 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AC008162.1-201ENST00000604718 254 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AL670379.1-201ENST00000604752 252 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AL670379.2-201ENST00000604983 252 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AL670379.5-201ENST00000605253 252 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AL670379.4-201ENST00000605279 254 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AL670379.12-201ENST00000605291 253 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AL670379.8-201ENST00000605353 252 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AL670379.7-201ENST00000605823 252 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AC022893.3-201ENST00000607665 437 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AC096772.1-201ENST00000609146 564 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.97□□□□□ -2.25
SDCBPO00560 uc_338.15-201ENST00000615470 191 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AC099842.1-201ENST00000619919 596 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 AL589994.2-201ENST00000621124 579 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.97□□□□□ -2.25
SDCBPO00560 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 FARSBP1-201ENST00000435808 1778 ntBASIC0.97□□□□□ -2.25
SDCBPO00560 RNU6-462P-201ENST00000362659 105 ntBASIC0.96□□□□□ -2.26
SDCBPO00560 SNORD26-201ENST00000384147 75 ntBASIC0.96□□□□□ -2.26
SDCBPO00560 RNU6-622P-201ENST00000384272 103 ntBASIC0.96□□□□□ -2.26
SDCBPO00560 RNU6-769P-201ENST00000384407 104 ntBASIC0.96□□□□□ -2.26
SDCBPO00560 RNU6-482P-201ENST00000391068 107 ntBASIC0.96□□□□□ -2.26
SDCBPO00560 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.96□□□□□ -2.26
SDCBPO00560 AL136310.1-201ENST00000404926 654 ntBASIC0.96□□□□□ -2.26
SDCBPO00560 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms