Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC073343.1-201ENST00000328239 651 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 SNORD116-4-201ENST00000384733 96 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 MIR1-2-201ENST00000384961 85 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 Y_RNA.582-201ENST00000391023 95 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 MIR888-201ENST00000401186 77 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNU2-39P-201ENST00000410604 198 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL030996.1-201ENST00000411430 235 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC009414.1-201ENST00000427200 443 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 MTCO2P19-201ENST00000427513 598 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC104651.1-201ENST00000427559 735 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC133104.1-201ENST00000429100 218 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL591704.1-201ENST00000432574 275 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNU7-23P-201ENST00000459465 62 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC025033.1-201ENST00000463883 194 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 RPS27AP10-201ENST00000496103 208 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 RBBP4P6-201ENST00000508098 202 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 MIR4775-201ENST00000581168 75 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC025449.1-201ENST00000603896 529 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 NDUFA8P1-201ENST00000605525 367 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 MIR98-201ENST00000606724 119 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 MIR15A-201ENST00000607334 83 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC104073.3-201ENST00000610942 955 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 Z99571.1-201ENST00000636677 394 ntBASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.96□□□□□ -2.1
TMX2-CTNND1H3BSU7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 SNORA38-201ENST00000363946 132 ntBASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 BPY2DP-201ENST00000422208 265 ntBASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 MTCYBP5-201ENST00000423752 1135 ntBASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 GTF2IP20-201ENST00000431663 360 ntBASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 GPM6BP2-201ENST00000432046 144 ntBASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 GPM6BP1-201ENST00000446387 144 ntBASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNA5SP233-201ENST00000459153 113 ntBASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC108078.1-201ENST00000508073 725 ntBASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNU6-685P-201ENST00000517088 95 ntBASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNA5SP291-201ENST00000517222 105 ntBASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC010546.1-201ENST00000569391 485 ntBASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC090616.3-201ENST00000582184 217 ntBASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 MIR3935-201ENST00000583472 104 ntBASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 MTND4LP5-201ENST00000605152 292 ntBASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 DUSP12P1-201ENST00000612874 516 ntBASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC011155.2-201ENST00000623202 216 ntBASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 FRG1KP-201ENST00000623592 341 ntBASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TMX2-CTNND1H3BSU7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL354685.2-201ENST00000448218 1447 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 HSPA8P4-201ENST00000511877 1920 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNU6-1097P-201ENST00000363586 107 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNU6-461P-201ENST00000364195 107 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNU6-371P-201ENST00000364283 108 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 SNORD115-7-201ENST00000365306 82 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNA5SP354-201ENST00000391247 136 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNU2-16P-201ENST00000410712 136 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL663109.1-201ENST00000411498 844 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 EEF1A1P40-201ENST00000412883 573 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL353193.1-201ENST00000421444 268 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 MTCO3P30-201ENST00000426425 670 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL591212.2-201ENST00000433923 257 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 GPR143P-201ENST00000434155 205 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 USP9YP8-201ENST00000441913 500 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC107626.1-201ENST00000471084 183 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC022493.1-201ENST00000492984 337 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC116562.3-201ENST00000506136 177 ntBASIC1.94□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC108078.2-201ENST00000510750 236 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms