Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC008526.1-201ENST00000509149 338 ntBASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 AC092436.3-201ENST00000511788 257 ntBASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 Y_RNA.682-201ENST00000516457 100 ntBASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 Y_RNA.691-201ENST00000516611 103 ntBASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 RNU6-566P-201ENST00000516790 107 ntBASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 AC105029.1-201ENST00000520250 669 ntBASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 AC005668.1-201ENST00000571142 476 ntBASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 RPS3AP23-202ENST00000574601 686 ntBASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 FGF7P1-201ENST00000582820 288 ntBASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 AL117336.2-201ENST00000602435 335 ntBASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 AC008121.1-201ENST00000603244 268 ntBASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 AC000403.1-201ENST00000613696 3585 ntBASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.11□□□□□ -1.91
TBC1D3FA6NER0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 MIR22-201ENST00000362190 85 ntBASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 RNU6-942P-201ENST00000363002 107 ntBASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 RNU6-128P-201ENST00000383976 107 ntBASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 Y_RNA.529-201ENST00000384586 119 ntBASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 SNORD67-201ENST00000390833 111 ntBASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 RN7SKP220-201ENST00000410611 288 ntBASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 AC093151.1-201ENST00000427711 313 ntBASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 RPS15AP5-201ENST00000436276 388 ntBASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 RNU6-581P-201ENST00000516214 105 ntBASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 RNA5SP454-201ENST00000517231 127 ntBASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 COPS8P3-201ENST00000526024 482 ntBASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 AC006199.1-201ENST00000548728 219 ntBASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 AC100830.2-201ENST00000581636 240 ntBASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 AC243960.4-201ENST00000600532 288 ntBASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 ELOCP5-201ENST00000604924 333 ntBASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 AC064836.2-201ENST00000609491 462 ntBASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 AC104985.2-201ENST00000620598 500 ntBASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 SCARNA4-202ENST00000625402 129 ntBASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 ZNF519P1-201ENST00000449011 1626 ntBASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
TBC1D3FA6NER0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 RNU1-100P-201ENST00000365255 165 ntBASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 RNU6-1329P-201ENST00000365664 107 ntBASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 RNU6-214P-201ENST00000384130 107 ntBASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 RNA5SP293-201ENST00000410527 113 ntBASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 AL590632.1-201ENST00000424289 371 ntBASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 HIGD1AP2-201ENST00000446367 280 ntBASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 AC092001.1-201ENST00000453012 261 ntBASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 AC096576.1-201ENST00000489014 359 ntBASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 FGF7P4-201ENST00000509595 295 ntBASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 AC022634.1-201ENST00000520765 532 ntBASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 AP005639.2-201ENST00000527592 928 ntBASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 AC026371.1-201ENST00000551867 419 ntBASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 AC138761.3-201ENST00000579993 334 ntBASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 AC020895.1-201ENST00000595362 272 ntBASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 AL132765.2-201ENST00000610812 351 ntBASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 AC104237.2-201ENST00000612456 443 ntBASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 AC011890.2-201ENST00000613393 294 ntBASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 AC004852.3-201ENST00000614131 326 ntBASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 AC099654.5-201ENST00000636479 350 ntBASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 AC112487.2-201ENST00000637950 304 ntBASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 ADAM3A-203ENST00000461344 2157 ntBASIC3.09□□□□□ -1.91
TBC1D3FA6NER0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TBC1D3FA6NER0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.08□□□□□ -1.92
TBC1D3FA6NER0 RNU6-562P-201ENST00000362731 107 ntBASIC3.08□□□□□ -1.92
TBC1D3FA6NER0 RNA5SP383-201ENST00000362934 120 ntBASIC3.08□□□□□ -1.92
TBC1D3FA6NER0 SNORA80A-201ENST00000363922 136 ntBASIC3.08□□□□□ -1.92
TBC1D3FA6NER0 Y_RNA.339-201ENST00000365325 102 ntBASIC3.08□□□□□ -1.92
TBC1D3FA6NER0 RNU6-805P-201ENST00000365643 106 ntBASIC3.08□□□□□ -1.92
TBC1D3FA6NER0 MIR548K-201ENST00000408406 116 ntBASIC3.08□□□□□ -1.92
TBC1D3FA6NER0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.08□□□□□ -1.92
TBC1D3FA6NER0 AC245291.1-201ENST00000419501 328 ntBASIC3.08□□□□□ -1.92
TBC1D3FA6NER0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.08□□□□□ -1.92
TBC1D3FA6NER0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.08□□□□□ -1.92
TBC1D3FA6NER0 AC025750.2-201ENST00000442609 450 ntBASIC3.08□□□□□ -1.92
TBC1D3FA6NER0 AC125238.1-201ENST00000448842 249 ntBASIC3.08□□□□□ -1.92
TBC1D3FA6NER0 RN7SL442P-201ENST00000473804 320 ntBASIC3.08□□□□□ -1.92
TBC1D3FA6NER0 AC116655.1-201ENST00000508324 901 ntBASIC3.08□□□□□ -1.92
TBC1D3FA6NER0 AC113155.1-201ENST00000511141 769 ntBASIC3.08□□□□□ -1.92
TBC1D3FA6NER0 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.08□□□□□ -1.92
TBC1D3FA6NER0 AC104576.1-201ENST00000524225 88 ntBASIC3.08□□□□□ -1.92
TBC1D3FA6NER0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms