Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 SNRPEP3-201ENST00000338402 276 ntBASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 RNU6-37P-201ENST00000362692 107 ntBASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 RNU6-11P-201ENST00000364234 107 ntBASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 MIR216A-201ENST00000385063 110 ntBASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 MTCO3P5-201ENST00000433620 714 ntBASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 MTND1P9-201ENST00000453775 944 ntBASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 AC109927.2-201ENST00000506416 303 ntBASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 MTND5P13-201ENST00000513046 1079 ntBASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 RNU6-405P-201ENST00000516637 110 ntBASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 RNU6-467P-201ENST00000517027 110 ntBASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 DEFB108E-201ENST00000524692 240 ntBASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 CR383656.8-201ENST00000549046 145 ntBASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 AC091057.3-201ENST00000602684 733 ntBASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 AC107952.2-201ENST00000606048 486 ntBASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 AL583856.2-201ENST00000606298 543 ntBASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 AL355472.4-201ENST00000610233 626 ntBASIC0.66□□□□□ -2.3
TRAV17A0A0B4J275 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 RNU6-28P-201ENST00000362378 107 ntBASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 RNU1-124P-201ENST00000363861 145 ntBASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 RNU6-1300P-201ENST00000391046 108 ntBASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 AL133475.1-201ENST00000404414 305 ntBASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 RNU2-32P-201ENST00000411193 191 ntBASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 USP9YP26-201ENST00000421008 661 ntBASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 CST2P1-201ENST00000425770 87 ntBASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 PRPS1P1-201ENST00000445305 876 ntBASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 ATP5J2P3-201ENST00000451550 258 ntBASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 UBL5P1-201ENST00000507979 193 ntBASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 RNU6-714P-201ENST00000516963 103 ntBASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 AC109329.1-201ENST00000518744 317 ntBASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 AP003392.2-201ENST00000527269 208 ntBASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 AC090115.3-201ENST00000553218 849 ntBASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 AC093249.1-201ENST00000567049 203 ntBASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 RN7SL793P-201ENST00000583259 296 ntBASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 AC005786.1-201ENST00000588553 154 ntBASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 MIR6513-201ENST00000621188 64 ntBASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 AC009268.2-201ENST00000621925 457 ntBASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 MIR1322-201ENST00000638013 71 ntBASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.65□□□□□ -2.31
TRAV17A0A0B4J275 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
TRAV17A0A0B4J275 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.64□□□□□ -2.31
TRAV17A0A0B4J275 OR5T3-201ENST00000303059 1023 ntBASIC0.64□□□□□ -2.31
TRAV17A0A0B4J275 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.64□□□□□ -2.31
TRAV17A0A0B4J275 MTND1P21-201ENST00000412991 285 ntBASIC0.64□□□□□ -2.31
TRAV17A0A0B4J275 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV17A0A0B4J275 RPL36AP53-201ENST00000432891 316 ntBASIC0.64□□□□□ -2.31
TRAV17A0A0B4J275 COX7BP2-201ENST00000437976 242 ntBASIC0.64□□□□□ -2.31
TRAV17A0A0B4J275 MTATP6P30-201ENST00000443540 664 ntBASIC0.64□□□□□ -2.31
TRAV17A0A0B4J275 AL035666.1-201ENST00000446195 348 ntBASIC0.64□□□□□ -2.31
TRAV17A0A0B4J275 AL353718.1-201ENST00000451028 517 ntBASIC0.64□□□□□ -2.31
TRAV17A0A0B4J275 DUXAP8-207ENST00000456786 622 ntBASIC0.64□□□□□ -2.31
TRAV17A0A0B4J275 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.64□□□□□ -2.31
TRAV17A0A0B4J275 MTCYBP16-201ENST00000509187 1129 ntBASIC0.64□□□□□ -2.31
TRAV17A0A0B4J275 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV17A0A0B4J275 MTCYBP43-201ENST00000513621 740 ntBASIC0.64□□□□□ -2.31
TRAV17A0A0B4J275 AC112198.4-201ENST00000515450 351 ntBASIC0.64□□□□□ -2.31
TRAV17A0A0B4J275 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV17A0A0B4J275 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.64□□□□□ -2.31
TRAV17A0A0B4J275 AL391646.1-201ENST00000603860 190 ntBASIC0.64□□□□□ -2.31
TRAV17A0A0B4J275 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.64□□□□□ -2.31
TRAV17A0A0B4J275 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
TRAV17A0A0B4J275 ICE2P2-201ENST00000483823 2787 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 DDX43P2-201ENST00000604753 1354 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 OR4G2P-201ENST00000328113 903 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 RNU6-343P-201ENST00000364709 104 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 RNU6-546P-201ENST00000383991 107 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 RNU6-549P-201ENST00000384433 107 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 RNU6-1274P-201ENST00000384557 107 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 RNU6-1235P-201ENST00000384559 107 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 MIR146A-201ENST00000385201 99 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 RNU6-932P-201ENST00000391108 106 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 TAF13P2-201ENST00000416876 286 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 BTF3L4P3-201ENST00000418879 476 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 NCOR1P3-201ENST00000420479 303 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 AC013410.2-201ENST00000422627 201 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 GPM6BP2-201ENST00000432046 144 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 GPM6BP1-201ENST00000446387 144 ntBASIC0.63□□□□□ -2.31
TRAV17A0A0B4J275 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms