Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 RNA5SP458-201ENST00000516188 119 ntBASIC1.11□□□□□ -2.23
TRAV41A0A0B4J266 RNU2-53P-201ENST00000516257 147 ntBASIC1.11□□□□□ -2.23
TRAV41A0A0B4J266 RNU6-586P-201ENST00000517265 104 ntBASIC1.11□□□□□ -2.23
TRAV41A0A0B4J266 AP003392.2-201ENST00000527269 208 ntBASIC1.11□□□□□ -2.23
TRAV41A0A0B4J266 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.11□□□□□ -2.23
TRAV41A0A0B4J266 AL161670.1-201ENST00000554348 137 ntBASIC1.11□□□□□ -2.23
TRAV41A0A0B4J266 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.11□□□□□ -2.23
TRAV41A0A0B4J266 MIR3146-201ENST00000580367 79 ntBASIC1.11□□□□□ -2.23
TRAV41A0A0B4J266 BNIP3P30-201ENST00000601184 574 ntBASIC1.11□□□□□ -2.23
TRAV41A0A0B4J266 AC073410.2-201ENST00000603240 332 ntBASIC1.11□□□□□ -2.23
TRAV41A0A0B4J266 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.11□□□□□ -2.23
TRAV41A0A0B4J266 Z82243.1-201ENST00000609432 473 ntBASIC1.11□□□□□ -2.23
TRAV41A0A0B4J266 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV41A0A0B4J266 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.11□□□□□ -2.23
TRAV41A0A0B4J266 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
TRAV41A0A0B4J266 ZNF680P1-201ENST00000436625 1469 ntBASIC1.11□□□□□ -2.23
TRAV41A0A0B4J266 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
TRAV41A0A0B4J266 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 MIR424-201ENST00000362227 98 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 RNU6-858P-201ENST00000362436 107 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 Y_RNA.40-201ENST00000362645 93 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 SNORD114-19-201ENST00000363072 75 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 MIR597-201ENST00000384968 97 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 MIR301A-201ENST00000385261 86 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 ELOCP17-201ENST00000414751 326 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 ELOCP9-201ENST00000418624 239 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AL606517.1-201ENST00000446914 387 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AC009474.2-201ENST00000451383 136 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AL139824.2-201ENST00000458731 1095 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AC134050.1-201ENST00000495088 933 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AC119751.4-201ENST00000507498 357 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 RNU6-237P-201ENST00000515985 71 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AP000763.2-201ENST00000540641 163 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AC123904.2-201ENST00000548059 300 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 MIR1273C-201ENST00000578669 77 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 KC877982.1-201ENST00000602313 470 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AP000942.3-201ENST00000603702 160 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AL670379.6-201ENST00000603753 252 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AL670379.11-201ENST00000604059 253 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AC010900.2-201ENST00000604508 210 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AC008162.1-201ENST00000604718 254 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AL670379.1-201ENST00000604752 252 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AL670379.5-201ENST00000605253 252 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AL592221.1-201ENST00000605266 382 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AL670379.12-201ENST00000605291 253 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AL158042.1-201ENST00000605338 460 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AL670379.8-201ENST00000605353 252 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AC013244.3-201ENST00000605614 388 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AL670379.7-201ENST00000605823 252 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 MIR15A-201ENST00000607334 83 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AC096772.1-201ENST00000609146 564 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AC012360.2-201ENST00000609349 391 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 RMST_6.1-201ENST00000611980 203 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AL132822.1-201ENST00000617063 513 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 AC009269.6-201ENST00000621778 588 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.1□□□□□ -2.23
TRAV41A0A0B4J266 MIR378A-201ENST00000362177 66 ntBASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 Y_RNA.33-201ENST00000362591 102 ntBASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 RNU6-1010P-201ENST00000362757 107 ntBASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 RNU6-529P-201ENST00000363383 104 ntBASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 RNU6-944P-201ENST00000364023 107 ntBASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 RNU4-68P-201ENST00000364314 141 ntBASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 RNU5E-6P-201ENST00000365574 115 ntBASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 RNU11-3P-201ENST00000391111 133 ntBASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 RNU6-757P-201ENST00000410334 100 ntBASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 PRELID3BP1-201ENST00000457142 540 ntBASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 AP001025.1-201ENST00000486139 332 ntBASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 HSPE1P23-201ENST00000509838 286 ntBASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 AC068587.4-201ENST00000533893 186 ntBASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 AC023050.2-201ENST00000544968 387 ntBASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 DNAJC19P9-201ENST00000555084 351 ntBASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 AC092325.1-201ENST00000566449 554 ntBASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 MIR3124-201ENST00000582636 67 ntBASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 AP001981.2-201ENST00000603241 418 ntBASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 uc_338.12-201ENST00000616344 181 ntBASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 AP000484.1-201ENST00000620067 1252 ntBASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 AC092656.1-203ENST00000624134 423 ntBASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.09□□□□□ -2.23
TRAV41A0A0B4J266 AL161722.3-201ENST00000605789 2983 ntBASIC1.09□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms