Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 AC097463.2-201ENST00000421074 142 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 Z98742.2-201ENST00000431564 187 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 NDUFB1P2-201ENST00000449477 176 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 AC006026.2-201ENST00000457376 180 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 AC117503.1-201ENST00000472241 394 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 RPS27AP9-201ENST00000477681 438 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 RPL9P33-201ENST00000484311 566 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 AC091133.4-201ENST00000511142 308 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 MIR892C-201ENST00000516410 77 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 RNU6-405P-201ENST00000516637 110 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 RNU6-826P-201ENST00000516827 104 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 AC027176.1-201ENST00000560204 514 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 AC087683.1-201ENST00000591187 441 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 DEFB131E-202ENST00000602581 683 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 AC025449.1-201ENST00000603896 529 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 Z99129.1-201ENST00000612510 255 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 AC093783.1-201ENST00000612976 329 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 AL359740.1-201ENST00000624340 592 ntBASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.53□□□□□ -2
PCDHGA1Q9Y5H4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 AC080100.1-201ENST00000624239 5356 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 RPL9P7-201ENST00000330965 580 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 RNU6-1120P-201ENST00000362988 108 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 Y_RNA.159-201ENST00000363674 87 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 RNU5A-6P-201ENST00000384136 116 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 RNU6-606P-201ENST00000384721 111 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 MIR578-201ENST00000384828 96 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 MIR218-1-201ENST00000384999 110 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 EEF1A1P40-201ENST00000412883 573 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 USP9YP14-201ENST00000430663 563 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 AC104058.1-201ENST00000448028 297 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 AC003982.1-202ENST00000469928 248 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 RPS3AP17-201ENST00000472594 777 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 RPL23AP11-201ENST00000475260 469 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 MRPL42P6-201ENST00000486397 371 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 FAM92A1P2-202ENST00000504766 877 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 MTND3P5-201ENST00000512798 333 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 AC010493.1-201ENST00000513479 292 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 AC112206.3-201ENST00000514578 389 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 MTND1P15-201ENST00000579262 949 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 AC105245.1-201ENST00000581934 244 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 AL138889.2-201ENST00000603883 242 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 AL670379.10-201ENST00000604330 253 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 AL049779.4-201ENST00000604500 156 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 AL670379.9-201ENST00000605428 253 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 NDUFA8P1-201ENST00000605525 367 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 uc_338.11-201ENST00000619132 160 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 AC024581.2-201ENST00000619986 252 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 AC138627.2-201ENST00000624202 601 ntBASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
PCDHGA1Q9Y5H4 Y_RNA.194-201ENST00000363985 102 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 RNU6-898P-201ENST00000365627 104 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 RNU6-1042P-201ENST00000384204 107 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 RNU2-63P-201ENST00000410792 194 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 Y_RNA.623-201ENST00000411128 95 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 MTATP6P18-201ENST00000417994 673 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 Z98742.3-201ENST00000418637 326 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 AL356320.1-201ENST00000429616 163 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 AL360271.2-201ENST00000447710 161 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 AC012308.1-201ENST00000451232 178 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 AL583843.1-201ENST00000456070 346 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 AP001324.2-201ENST00000461163 319 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 AC133134.1-201ENST00000466800 359 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 MTAPP1-201ENST00000489154 819 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 RPS29P21-201ENST00000496272 170 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 AC108078.1-201ENST00000508073 725 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 HMGB3P3-201ENST00000510526 400 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 SNORA9.3-201ENST00000516383 129 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms