Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CDH9Q9ULB4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
CDH9Q9ULB4 RBBP8P1-201ENST00000449447 1844 ntBASIC1.99□□□□□ -2.09
CDH9Q9ULB4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
CDH9Q9ULB4 RNU1-57P-201ENST00000384491 166 ntBASIC1.99□□□□□ -2.09
CDH9Q9ULB4 MIR561-201ENST00000385216 97 ntBASIC1.99□□□□□ -2.09
CDH9Q9ULB4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CDH9Q9ULB4 MIR676-201ENST00000390702 67 ntBASIC1.99□□□□□ -2.09
CDH9Q9ULB4 SNORA40.18-201ENST00000391200 128 ntBASIC1.99□□□□□ -2.09
CDH9Q9ULB4 SNORA26.9-201ENST00000391322 122 ntBASIC1.99□□□□□ -2.09
CDH9Q9ULB4 MRPL42P2-201ENST00000403169 426 ntBASIC1.99□□□□□ -2.09
CDH9Q9ULB4 MTCYBP36-201ENST00000404146 440 ntBASIC1.99□□□□□ -2.09
CDH9Q9ULB4 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.99□□□□□ -2.09
CDH9Q9ULB4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.99□□□□□ -2.09
CDH9Q9ULB4 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.99□□□□□ -2.09
CDH9Q9ULB4 AL627311.1-201ENST00000431514 115 ntBASIC1.99□□□□□ -2.09
CDH9Q9ULB4 AC007677.1-201ENST00000445757 515 ntBASIC1.99□□□□□ -2.09
CDH9Q9ULB4 AL606517.1-201ENST00000446914 387 ntBASIC1.99□□□□□ -2.09
CDH9Q9ULB4 AC107032.1-201ENST00000485945 480 ntBASIC1.99□□□□□ -2.09
CDH9Q9ULB4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.99□□□□□ -2.09
CDH9Q9ULB4 AC107393.1-201ENST00000512403 346 ntBASIC1.99□□□□□ -2.09
CDH9Q9ULB4 RNA5SP137-201ENST00000516833 135 ntBASIC1.99□□□□□ -2.09
CDH9Q9ULB4 RNA5SP364-201ENST00000516938 78 ntBASIC1.99□□□□□ -2.09
CDH9Q9ULB4 MIR4529-201ENST00000578110 78 ntBASIC1.99□□□□□ -2.09
CDH9Q9ULB4 MIR4448-201ENST00000584360 86 ntBASIC1.99□□□□□ -2.09
CDH9Q9ULB4 AL158032.1-201ENST00000605401 106 ntBASIC1.99□□□□□ -2.09
CDH9Q9ULB4 MIR7844-201ENST00000616161 122 ntBASIC1.99□□□□□ -2.09
CDH9Q9ULB4 AL162373.1-201ENST00000620433 407 ntBASIC1.99□□□□□ -2.09
CDH9Q9ULB4 MIR3529-201ENST00000637713 78 ntBASIC1.99□□□□□ -2.09
CDH9Q9ULB4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
CDH9Q9ULB4 AC103710.2-202ENST00000641454 2853 ntBASIC1.99□□□□□ -2.09
CDH9Q9ULB4 AC009487.4-201ENST00000624969 3585 ntBASIC1.98□□□□□ -2.09
CDH9Q9ULB4 SNORD3E-201ENST00000362899 217 ntBASIC1.98□□□□□ -2.09
CDH9Q9ULB4 RNU6-843P-201ENST00000384454 104 ntBASIC1.98□□□□□ -2.09
CDH9Q9ULB4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.98□□□□□ -2.09
CDH9Q9ULB4 AC138623.1-201ENST00000418060 216 ntBASIC1.98□□□□□ -2.09
CDH9Q9ULB4 MTND2P9-201ENST00000422293 931 ntBASIC1.98□□□□□ -2.09
CDH9Q9ULB4 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.98□□□□□ -2.09
CDH9Q9ULB4 AL591806.2-201ENST00000433122 173 ntBASIC1.98□□□□□ -2.09
CDH9Q9ULB4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.98□□□□□ -2.09
CDH9Q9ULB4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.98□□□□□ -2.09
CDH9Q9ULB4 NDUFB1P2-201ENST00000449477 176 ntBASIC1.98□□□□□ -2.09
CDH9Q9ULB4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.98□□□□□ -2.09
CDH9Q9ULB4 AC012308.1-201ENST00000451232 178 ntBASIC1.98□□□□□ -2.09
CDH9Q9ULB4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.98□□□□□ -2.09
CDH9Q9ULB4 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.98□□□□□ -2.09
CDH9Q9ULB4 AC112206.3-201ENST00000514578 389 ntBASIC1.98□□□□□ -2.09
CDH9Q9ULB4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
CDH9Q9ULB4 SNORA4.4-201ENST00000515921 135 ntBASIC1.98□□□□□ -2.09
CDH9Q9ULB4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.98□□□□□ -2.09
CDH9Q9ULB4 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.98□□□□□ -2.09
CDH9Q9ULB4 ADI1P3-201ENST00000549509 470 ntBASIC1.98□□□□□ -2.09
CDH9Q9ULB4 AC078899.2-201ENST00000595282 212 ntBASIC1.98□□□□□ -2.09
CDH9Q9ULB4 AC011494.1-201ENST00000596454 237 ntBASIC1.98□□□□□ -2.09
CDH9Q9ULB4 RPL30P11-203ENST00000598995 310 ntBASIC1.98□□□□□ -2.09
CDH9Q9ULB4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.98□□□□□ -2.09
CDH9Q9ULB4 BNIP3P30-201ENST00000601184 574 ntBASIC1.98□□□□□ -2.09
CDH9Q9ULB4 AC073410.2-201ENST00000603240 332 ntBASIC1.98□□□□□ -2.09
CDH9Q9ULB4 NDUFA8P1-201ENST00000605525 367 ntBASIC1.98□□□□□ -2.09
CDH9Q9ULB4 AC093788.1-201ENST00000609356 927 ntBASIC1.98□□□□□ -2.09
CDH9Q9ULB4 AC138749.5-201ENST00000611461 208 ntBASIC1.98□□□□□ -2.09
CDH9Q9ULB4 AC012409.4-201ENST00000612923 249 ntBASIC1.98□□□□□ -2.09
CDH9Q9ULB4 AC116165.2-201ENST00000616705 206 ntBASIC1.98□□□□□ -2.09
CDH9Q9ULB4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CDH9Q9ULB4 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CDH9Q9ULB4 RNU6-1010P-201ENST00000362757 107 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 RNU6-942P-201ENST00000363002 107 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 SNORA25B-201ENST00000365507 128 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.97□□□□□ -2.09
CDH9Q9ULB4 RNU6-72P-201ENST00000384285 79 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 RNU6-39P-201ENST00000384344 107 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 AL591034.2-201ENST00000402839 359 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.97□□□□□ -2.09
CDH9Q9ULB4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.97□□□□□ -2.09
CDH9Q9ULB4 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 AC007283.2-201ENST00000424739 197 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 AC008267.5-201ENST00000424928 265 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 AL593851.1-201ENST00000426171 157 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 AL589872.1-201ENST00000426602 288 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 USP9YP15-201ENST00000442391 422 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.97□□□□□ -2.09
CDH9Q9ULB4 PMCHL2-203ENST00000457791 237 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 snoU13.23-201ENST00000458863 104 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 snoU109.2-201ENST00000459316 135 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.97□□□□□ -2.09
CDH9Q9ULB4 HMGB1P30-201ENST00000492455 606 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.97□□□□□ -2.09
CDH9Q9ULB4 AC109329.1-201ENST00000518744 317 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 AP004607.1-201ENST00000524456 203 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH9Q9ULB4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.97□□□□□ -2.09
CDH9Q9ULB4 AC233702.2-202ENST00000562547 291 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 DEFB122-202ENST00000569013 197 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH9Q9ULB4 AL138889.2-201ENST00000603883 242 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 AC021646.1-201ENST00000605469 484 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 AC022202.1-201ENST00000613515 211 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 AC027807.2-201ENST00000616099 408 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 U6.42-201ENST00000618440 107 ntBASIC1.97□□□□□ -2.09
CDH9Q9ULB4 AC009878.1-201ENST00000621819 340 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms