Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC025465.3-201ENST00000510570 311 ntBASIC0.24□□□□□ -2.37
SCN11AQ9UI33 AC067904.2-201ENST00000517322 1283 ntBASIC0.24□□□□□ -2.37
SCN11AQ9UI33 AP001893.2-201ENST00000526949 202 ntBASIC0.24□□□□□ -2.37
SCN11AQ9UI33 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.24□□□□□ -2.37
SCN11AQ9UI33 AC025588.3-201ENST00000604182 274 ntBASIC0.24□□□□□ -2.37
SCN11AQ9UI33 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.24□□□□□ -2.37
SCN11AQ9UI33 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.24□□□□□ -2.37
SCN11AQ9UI33 Y_RNA.136-201ENST00000363444 102 ntBASIC0.24□□□□□ -2.37
SCN11AQ9UI33 SSR1P1-201ENST00000407630 814 ntBASIC0.24□□□□□ -2.37
SCN11AQ9UI33 TRAPPC13P1-201ENST00000435991 1062 ntBASIC0.24□□□□□ -2.37
SCN11AQ9UI33 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.24□□□□□ -2.37
SCN11AQ9UI33 NRON-201ENST00000517270 370 ntBASIC0.24□□□□□ -2.37
SCN11AQ9UI33 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.24□□□□□ -2.37
SCN11AQ9UI33 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.24□□□□□ -2.37
SCN11AQ9UI33 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.24□□□□□ -2.37
SCN11AQ9UI33 MIR4305-201ENST00000583252 102 ntBASIC0.24□□□□□ -2.37
SCN11AQ9UI33 MZT1P2-201ENST00000604387 248 ntBASIC0.24□□□□□ -2.37
SCN11AQ9UI33 AC018926.3-201ENST00000618841 406 ntBASIC0.24□□□□□ -2.37
SCN11AQ9UI33 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.23□□□□□ -2.37
SCN11AQ9UI33 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0.23□□□□□ -2.37
SCN11AQ9UI33 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.23□□□□□ -2.37
SCN11AQ9UI33 MTND5P14-201ENST00000441481 1267 ntBASIC0.23□□□□□ -2.37
SCN11AQ9UI33 RAC1P7-201ENST00000445367 377 ntBASIC0.23□□□□□ -2.37
SCN11AQ9UI33 AC090142.3-201ENST00000519012 385 ntBASIC0.23□□□□□ -2.37
SCN11AQ9UI33 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.23□□□□□ -2.37
SCN11AQ9UI33 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.23□□□□□ -2.37
SCN11AQ9UI33 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.23□□□□□ -2.37
SCN11AQ9UI33 MIR4667-201ENST00000578933 66 ntBASIC0.23□□□□□ -2.37
SCN11AQ9UI33 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.23□□□□□ -2.37
SCN11AQ9UI33 RNY4P3-201ENST00000365254 95 ntBASIC0.22□□□□□ -2.37
SCN11AQ9UI33 RNA5SP501-201ENST00000410990 112 ntBASIC0.22□□□□□ -2.37
SCN11AQ9UI33 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
SCN11AQ9UI33 CYB5AP5-201ENST00000549779 389 ntBASIC0.22□□□□□ -2.37
SCN11AQ9UI33 AL391813.1-201ENST00000603098 260 ntBASIC0.22□□□□□ -2.37
SCN11AQ9UI33 BX284668.6-201ENST00000606899 438 ntBASIC0.22□□□□□ -2.37
SCN11AQ9UI33 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.22□□□□□ -2.37
SCN11AQ9UI33 MIR1303-201ENST00000408625 86 ntBASIC0.22□□□□□ -2.37
SCN11AQ9UI33 AC092634.6-201ENST00000418558 192 ntBASIC0.22□□□□□ -2.37
SCN11AQ9UI33 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.22□□□□□ -2.37
SCN11AQ9UI33 BET1P1-201ENST00000482276 359 ntBASIC0.22□□□□□ -2.37
SCN11AQ9UI33 RNU6-27P-201ENST00000516146 107 ntBASIC0.22□□□□□ -2.37
SCN11AQ9UI33 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.22□□□□□ -2.37
SCN11AQ9UI33 CYP3A52P-201ENST00000563326 91 ntBASIC0.22□□□□□ -2.37
SCN11AQ9UI33 AC008088.1-201ENST00000580993 280 ntBASIC0.22□□□□□ -2.37
SCN11AQ9UI33 CLIC4P2-201ENST00000601934 717 ntBASIC0.22□□□□□ -2.37
SCN11AQ9UI33 AC112220.3-201ENST00000605502 502 ntBASIC0.22□□□□□ -2.37
SCN11AQ9UI33 MIR6134-201ENST00000617606 109 ntBASIC0.22□□□□□ -2.37
SCN11AQ9UI33 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.22□□□□□ -2.37
SCN11AQ9UI33 AC006001.4-201ENST00000622243 395 ntBASIC0.22□□□□□ -2.37
SCN11AQ9UI33 AC009033.1-201ENST00000624279 431 ntBASIC0.22□□□□□ -2.37
SCN11AQ9UI33 AC092125.1-201ENST00000562568 1995 ntBASIC0.21□□□□□ -2.38
SCN11AQ9UI33 RPS3AP36-201ENST00000398190 775 ntBASIC0.21□□□□□ -2.38
SCN11AQ9UI33 GTF2IP13-201ENST00000438487 386 ntBASIC0.21□□□□□ -2.38
SCN11AQ9UI33 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.21□□□□□ -2.38
SCN11AQ9UI33 RNU6-197P-201ENST00000516680 100 ntBASIC0.21□□□□□ -2.38
SCN11AQ9UI33 SNORA31.17-201ENST00000516953 127 ntBASIC0.21□□□□□ -2.38
SCN11AQ9UI33 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.21□□□□□ -2.38
SCN11AQ9UI33 AL357075.2-201ENST00000614906 189 ntBASIC0.21□□□□□ -2.38
SCN11AQ9UI33 MIR8063-201ENST00000621930 81 ntBASIC0.21□□□□□ -2.38
SCN11AQ9UI33 AC009950.2-201ENST00000636548 183 ntBASIC0.21□□□□□ -2.38
SCN11AQ9UI33 SNORD115-3-201ENST00000363100 82 ntBASIC0.2□□□□□ -2.38
SCN11AQ9UI33 RNU6-348P-201ENST00000384386 107 ntBASIC0.2□□□□□ -2.38
SCN11AQ9UI33 RNU6-452P-201ENST00000384406 107 ntBASIC0.2□□□□□ -2.38
SCN11AQ9UI33 RNU6-110P-201ENST00000384508 104 ntBASIC0.2□□□□□ -2.38
SCN11AQ9UI33 MIR19B1-201ENST00000384829 87 ntBASIC0.2□□□□□ -2.38
SCN11AQ9UI33 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
SCN11AQ9UI33 RNU6-700P-201ENST00000391043 107 ntBASIC0.2□□□□□ -2.38
SCN11AQ9UI33 MIR888-201ENST00000401186 77 ntBASIC0.2□□□□□ -2.38
SCN11AQ9UI33 AC027119.1-201ENST00000440877 241 ntBASIC0.2□□□□□ -2.38
SCN11AQ9UI33 AC067940.1-201ENST00000458411 300 ntBASIC0.2□□□□□ -2.38
SCN11AQ9UI33 HMGN1P13-201ENST00000505795 138 ntBASIC0.2□□□□□ -2.38
SCN11AQ9UI33 RNU5A-7P-201ENST00000515979 116 ntBASIC0.2□□□□□ -2.38
SCN11AQ9UI33 AC022616.2-201ENST00000523185 300 ntBASIC0.2□□□□□ -2.38
SCN11AQ9UI33 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
SCN11AQ9UI33 FAM60CP-201ENST00000591086 664 ntBASIC0.2□□□□□ -2.38
SCN11AQ9UI33 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
SCN11AQ9UI33 AC114482.1-201ENST00000418010 247 ntBASIC0.19□□□□□ -2.38
SCN11AQ9UI33 RPL21P47-201ENST00000483696 477 ntBASIC0.19□□□□□ -2.38
SCN11AQ9UI33 NACAP3-201ENST00000552100 481 ntBASIC0.19□□□□□ -2.38
SCN11AQ9UI33 AC015688.2-201ENST00000584523 262 ntBASIC0.19□□□□□ -2.38
SCN11AQ9UI33 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.19□□□□□ -2.38
SCN11AQ9UI33 BBIP1P1-201ENST00000602999 279 ntBASIC0.19□□□□□ -2.38
SCN11AQ9UI33 MIR6516-201ENST00000630554 81 ntBASIC0.19□□□□□ -2.38
SCN11AQ9UI33 RNU6-45P-201ENST00000384471 107 ntBASIC0.19□□□□□ -2.38
SCN11AQ9UI33 RNU2-49P-201ENST00000410666 184 ntBASIC0.19□□□□□ -2.38
SCN11AQ9UI33 RPS26P5-201ENST00000418544 335 ntBASIC0.19□□□□□ -2.38
SCN11AQ9UI33 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC0.19□□□□□ -2.38
SCN11AQ9UI33 RPL31P3-201ENST00000458430 332 ntBASIC0.19□□□□□ -2.38
SCN11AQ9UI33 RPL36AP48-201ENST00000485521 314 ntBASIC0.19□□□□□ -2.38
SCN11AQ9UI33 RNU6-486P-201ENST00000363116 107 ntBASIC0.18□□□□□ -2.38
SCN11AQ9UI33 AL356776.1-201ENST00000406574 447 ntBASIC0.18□□□□□ -2.38
SCN11AQ9UI33 RNA5SP100-201ENST00000410903 110 ntBASIC0.18□□□□□ -2.38
SCN11AQ9UI33 RNA5SP59-201ENST00000410922 110 ntBASIC0.18□□□□□ -2.38
SCN11AQ9UI33 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.18□□□□□ -2.38
SCN11AQ9UI33 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.18□□□□□ -2.38
SCN11AQ9UI33 BPY2DP-201ENST00000422208 265 ntBASIC0.18□□□□□ -2.38
SCN11AQ9UI33 RPL36P19-201ENST00000430744 301 ntBASIC0.18□□□□□ -2.38
SCN11AQ9UI33 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.18□□□□□ -2.38
SCN11AQ9UI33 RSL24D1P8-201ENST00000434442 492 ntBASIC0.18□□□□□ -2.38
SCN11AQ9UI33 MTCO1P44-201ENST00000441935 243 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms