Protein–RNA interactions for Protein: Q9NPR2

SEMA4B, Semaphorin-4B, humanhuman

Predicted RBP Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4BQ9NPR2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SEMA4BQ9NPR2 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.2□□□□□ -1.9
SEMA4BQ9NPR2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.2□□□□□ -1.9
SEMA4BQ9NPR2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SEMA4BQ9NPR2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SEMA4BQ9NPR2 RNU6-805P-201ENST00000365643 106 ntBASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 RNU1-73P-201ENST00000383971 164 ntBASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 MIR34B-201ENST00000385076 84 ntBASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 RPL21P90-201ENST00000415692 466 ntBASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 RPL7P37-201ENST00000425095 738 ntBASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 SNAP23P1-201ENST00000433229 246 ntBASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 AC125238.1-201ENST00000448842 249 ntBASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 MTCO3P10-201ENST00000455912 772 ntBASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 Y_RNA.653-201ENST00000459091 95 ntBASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 RN7SL330P-201ENST00000469709 307 ntBASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 AL163540.1-201ENST00000485382 386 ntBASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 AC090096.1-201ENST00000489168 390 ntBASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 RNU1-103P-201ENST00000516502 125 ntBASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 Y_RNA.711-201ENST00000516993 102 ntBASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 MIR5690-201ENST00000583739 73 ntBASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 AC073539.2-201ENST00000597113 165 ntBASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 AC002044.1-201ENST00000606707 158 ntBASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 MIR6128-201ENST00000615528 109 ntBASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 AC091903.1-201ENST00000624322 454 ntBASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 AC073476.4-201ENST00000628409 72 ntBASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 U2.21-201ENST00000637295 81 ntBASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.19□□□□□ -1.9
SEMA4BQ9NPR2 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 AC103988.1-201ENST00000566382 2177 ntBASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 SRP72P2-201ENST00000344851 1979 ntBASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 Y_RNA.31-201ENST00000362574 102 ntBASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 RNU6-778P-201ENST00000363269 103 ntBASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 RNU6-799P-201ENST00000363567 107 ntBASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 Y_RNA.197-201ENST00000364004 102 ntBASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 Y_RNA.202-201ENST00000364083 110 ntBASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 RNA5SP139-201ENST00000364340 117 ntBASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 Y_RNA.395-201ENST00000383945 109 ntBASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 RNU6-738P-201ENST00000384531 106 ntBASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 RNU6-308P-201ENST00000390957 107 ntBASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 RPL21P40-201ENST00000428586 483 ntBASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 RPL21P10-201ENST00000463521 490 ntBASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 AC130509.1-201ENST00000464158 433 ntBASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 RNU6-703P-201ENST00000516946 107 ntBASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 CYCSP27-201ENST00000527643 293 ntBASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 DNAJC8P1-201ENST00000554535 372 ntBASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 MIR4276-201ENST00000584832 70 ntBASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 AC116312.1-201ENST00000606841 314 ntBASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 AC010378.1-201ENST00000619270 362 ntBASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.18□□□□□ -1.9
SEMA4BQ9NPR2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
SEMA4BQ9NPR2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.17□□□□□ -1.9
SEMA4BQ9NPR2 AC110774.1-201ENST00000623567 2018 ntBASIC3.17□□□□□ -1.9
SEMA4BQ9NPR2 AC138393.1-203ENST00000327086 343 ntBASIC3.17□□□□□ -1.9
SEMA4BQ9NPR2 RNU1-105P-201ENST00000363470 161 ntBASIC3.17□□□□□ -1.9
SEMA4BQ9NPR2 RNU6-266P-201ENST00000364225 107 ntBASIC3.17□□□□□ -1.9
SEMA4BQ9NPR2 SNORA63C-201ENST00000364578 129 ntBASIC3.17□□□□□ -1.9
SEMA4BQ9NPR2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
SEMA4BQ9NPR2 RNU6-128P-201ENST00000383976 107 ntBASIC3.17□□□□□ -1.9
SEMA4BQ9NPR2 MIR578-201ENST00000384828 96 ntBASIC3.17□□□□□ -1.9
SEMA4BQ9NPR2 RNA5SP229-201ENST00000410809 99 ntBASIC3.17□□□□□ -1.9
SEMA4BQ9NPR2 AC098614.2-201ENST00000426040 255 ntBASIC3.17□□□□□ -1.9
SEMA4BQ9NPR2 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.17□□□□□ -1.9
SEMA4BQ9NPR2 AL360271.2-201ENST00000447710 161 ntBASIC3.17□□□□□ -1.9
SEMA4BQ9NPR2 ELOCP24-201ENST00000456370 334 ntBASIC3.17□□□□□ -1.9
SEMA4BQ9NPR2 RPL21P13-201ENST00000488305 481 ntBASIC3.17□□□□□ -1.9
SEMA4BQ9NPR2 AC139453.3-201ENST00000493276 369 ntBASIC3.17□□□□□ -1.9
SEMA4BQ9NPR2 AC093663.1-201ENST00000497190 394 ntBASIC3.17□□□□□ -1.9
SEMA4BQ9NPR2 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.17□□□□□ -1.9
SEMA4BQ9NPR2 AC079140.5-201ENST00000507882 310 ntBASIC3.17□□□□□ -1.9
SEMA4BQ9NPR2 MTND3P25-201ENST00000509243 135 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms