Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC023050.3-201ENST00000541142 333 ntBASIC2.9□□□□□ -1.95
UPF2Q9HAU5 AC078814.3-201ENST00000553036 491 ntBASIC2.9□□□□□ -1.95
UPF2Q9HAU5 HMGB1P14-201ENST00000557424 591 ntBASIC2.9□□□□□ -1.95
UPF2Q9HAU5 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.9□□□□□ -1.95
UPF2Q9HAU5 BNIP3P9-201ENST00000603714 553 ntBASIC2.9□□□□□ -1.95
UPF2Q9HAU5 AC098826.3-201ENST00000603823 466 ntBASIC2.9□□□□□ -1.95
UPF2Q9HAU5 AC135507.2-201ENST00000612443 309 ntBASIC2.9□□□□□ -1.95
UPF2Q9HAU5 AC002064.3-201ENST00000623448 346 ntBASIC2.9□□□□□ -1.95
UPF2Q9HAU5 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.9□□□□□ -1.95
UPF2Q9HAU5 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.9□□□□□ -1.95
UPF2Q9HAU5 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
UPF2Q9HAU5 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.89□□□□□ -1.95
UPF2Q9HAU5 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
UPF2Q9HAU5 Y_RNA.160-201ENST00000363677 92 ntBASIC2.89□□□□□ -1.95
UPF2Q9HAU5 Y_RNA.231-201ENST00000364358 102 ntBASIC2.89□□□□□ -1.95
UPF2Q9HAU5 SNORA75B-201ENST00000384053 137 ntBASIC2.89□□□□□ -1.95
UPF2Q9HAU5 RNU6-190P-201ENST00000384154 102 ntBASIC2.89□□□□□ -1.95
UPF2Q9HAU5 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
UPF2Q9HAU5 AL078595.1-201ENST00000404458 226 ntBASIC2.89□□□□□ -1.95
UPF2Q9HAU5 Y_RNA.615-201ENST00000410769 117 ntBASIC2.89□□□□□ -1.95
UPF2Q9HAU5 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.89□□□□□ -1.95
UPF2Q9HAU5 CBWD4P-201ENST00000445695 655 ntBASIC2.89□□□□□ -1.95
UPF2Q9HAU5 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.89□□□□□ -1.95
UPF2Q9HAU5 SNORD109B-201ENST00000458961 67 ntBASIC2.89□□□□□ -1.95
UPF2Q9HAU5 SNORD109A-201ENST00000459128 67 ntBASIC2.89□□□□□ -1.95
UPF2Q9HAU5 AC087588.1-201ENST00000462203 316 ntBASIC2.89□□□□□ -1.95
UPF2Q9HAU5 HMGN1P12-201ENST00000499125 195 ntBASIC2.89□□□□□ -1.95
UPF2Q9HAU5 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.89□□□□□ -1.95
UPF2Q9HAU5 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.89□□□□□ -1.95
UPF2Q9HAU5 AC112206.3-201ENST00000514578 389 ntBASIC2.89□□□□□ -1.95
UPF2Q9HAU5 RNU4-29P-201ENST00000515943 174 ntBASIC2.89□□□□□ -1.95
UPF2Q9HAU5 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.89□□□□□ -1.95
UPF2Q9HAU5 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.89□□□□□ -1.95
UPF2Q9HAU5 AC011471.1-201ENST00000585766 187 ntBASIC2.89□□□□□ -1.95
UPF2Q9HAU5 ELOCP29-201ENST00000588193 334 ntBASIC2.89□□□□□ -1.95
UPF2Q9HAU5 AL161798.1-201ENST00000604630 131 ntBASIC2.89□□□□□ -1.95
UPF2Q9HAU5 AC009994.1-201ENST00000606889 253 ntBASIC2.89□□□□□ -1.95
UPF2Q9HAU5 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.89□□□□□ -1.95
UPF2Q9HAU5 MIR15A-201ENST00000607334 83 ntBASIC2.89□□□□□ -1.95
UPF2Q9HAU5 DUSP12P1-201ENST00000612874 516 ntBASIC2.89□□□□□ -1.95
UPF2Q9HAU5 AL161629.2-201ENST00000615347 275 ntBASIC2.89□□□□□ -1.95
UPF2Q9HAU5 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.89□□□□□ -1.95
UPF2Q9HAU5 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.89□□□□□ -1.95
UPF2Q9HAU5 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.89□□□□□ -1.95
UPF2Q9HAU5 MTND1P37-201ENST00000636562 264 ntBASIC2.89□□□□□ -1.95
UPF2Q9HAU5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.89□□□□□ -1.95
UPF2Q9HAU5 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
UPF2Q9HAU5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
UPF2Q9HAU5 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.88□□□□□ -1.95
UPF2Q9HAU5 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
UPF2Q9HAU5 UBE2L2-201ENST00000254302 429 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 NACAP2-201ENST00000318548 624 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 RNU6-512P-201ENST00000364438 103 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 U3.12-201ENST00000364498 214 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 SNORA4.3-201ENST00000365564 137 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 Y_RNA.378-201ENST00000365652 113 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 RNU6-116P-201ENST00000384042 109 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 SNORA16.2-201ENST00000390991 127 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 NDUFB4P4-201ENST00000404822 243 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.88□□□□□ -1.95
UPF2Q9HAU5 ARL5AP4-201ENST00000430731 512 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 AL591212.2-201ENST00000433923 257 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 AL512844.2-201ENST00000433990 593 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 AC107083.1-201ENST00000439643 279 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.88□□□□□ -1.95
UPF2Q9HAU5 RPS15AP27-201ENST00000449183 343 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 FABP5P13-201ENST00000452144 328 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.88□□□□□ -1.95
UPF2Q9HAU5 RNU7-66P-201ENST00000459469 62 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 RPS20P22-201ENST00000473700 357 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.88□□□□□ -1.95
UPF2Q9HAU5 AC091951.2-201ENST00000500762 203 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.88□□□□□ -1.95
UPF2Q9HAU5 RNU6-914P-201ENST00000516749 109 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 CENPUP1-201ENST00000526649 1202 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 AL137161.1-201ENST00000532231 390 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
UPF2Q9HAU5 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
UPF2Q9HAU5 AC005730.3-201ENST00000583067 366 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 AC018638.8-201ENST00000588755 281 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 AC174048.1-201ENST00000603389 144 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.88□□□□□ -1.95
UPF2Q9HAU5 AL136221.1-201ENST00000621449 509 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 AC073308.1-201ENST00000623696 305 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 MIR1291-201ENST00000627649 87 ntBASIC2.88□□□□□ -1.95
UPF2Q9HAU5 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
UPF2Q9HAU5 MTND4P35-201ENST00000604257 1375 ntBASIC2.87□□□□□ -1.95
UPF2Q9HAU5 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
UPF2Q9HAU5 Y_RNA.70-201ENST00000362886 110 ntBASIC2.87□□□□□ -1.95
UPF2Q9HAU5 RNU6-1287P-201ENST00000362914 107 ntBASIC2.87□□□□□ -1.95
UPF2Q9HAU5 RNU6-1167P-201ENST00000363227 94 ntBASIC2.87□□□□□ -1.95
UPF2Q9HAU5 RNU6-198P-201ENST00000384258 104 ntBASIC2.87□□□□□ -1.95
UPF2Q9HAU5 RNU6-1060P-201ENST00000384664 107 ntBASIC2.87□□□□□ -1.95
UPF2Q9HAU5 AL359511.1-201ENST00000402970 211 ntBASIC2.87□□□□□ -1.95
UPF2Q9HAU5 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.87□□□□□ -1.95
UPF2Q9HAU5 RPL21P111-201ENST00000418453 477 ntBASIC2.87□□□□□ -1.95
UPF2Q9HAU5 AL160275.3-201ENST00000423876 471 ntBASIC2.87□□□□□ -1.95
UPF2Q9HAU5 AL592045.1-201ENST00000429867 352 ntBASIC2.87□□□□□ -1.95
UPF2Q9HAU5 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.87□□□□□ -1.95
UPF2Q9HAU5 USP9YP8-201ENST00000441913 500 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 623.8 ms