Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 RNU6-371P-201ENST00000364283 108 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 SNORA67.1-201ENST00000364749 141 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
RNF41Q9H4P4 MIR454-201ENST00000390180 115 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 RNU6-750P-201ENST00000390946 107 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 RNU2-66P-201ENST00000410650 161 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 RNU2-49P-201ENST00000410666 184 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 EEF1A1P40-201ENST00000412883 573 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 AC098614.2-201ENST00000426040 255 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.36□□□□□ -2.03
RNF41Q9H4P4 AL513124.1-201ENST00000450410 614 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 AC011753.1-201ENST00000451001 220 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.36□□□□□ -2.03
RNF41Q9H4P4 FABP5P13-201ENST00000452144 328 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 TRBV1-201ENST00000476502 284 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 RPL38P4-201ENST00000502376 214 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 MTND2P33-201ENST00000506452 1031 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 MTCO3P7-201ENST00000510008 774 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 AC113155.1-201ENST00000511141 769 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 MTND3P5-201ENST00000512798 333 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.36□□□□□ -2.03
RNF41Q9H4P4 RN7SKP298-201ENST00000515950 94 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.36□□□□□ -2.03
RNF41Q9H4P4 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.36□□□□□ -2.03
RNF41Q9H4P4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.36□□□□□ -2.03
RNF41Q9H4P4 OR4R1P-201ENST00000529879 463 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.36□□□□□ -2.03
RNF41Q9H4P4 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RNF41Q9H4P4 ADI1P3-201ENST00000549509 470 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 NACAP3-201ENST00000552100 481 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.36□□□□□ -2.03
RNF41Q9H4P4 AL157871.3-201ENST00000557231 293 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 OR1M4P-201ENST00000589199 287 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 AC087683.1-201ENST00000591187 441 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 AC025449.1-201ENST00000603896 529 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 AL355598.1-201ENST00000604169 202 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RNF41Q9H4P4 HSPA8P4-201ENST00000511877 1920 ntBASIC2.36□□□□□ -2.03
RNF41Q9H4P4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 RNU6-179P-201ENST00000363350 107 ntBASIC2.35□□□□□ -2.03
RNF41Q9H4P4 RNU6-166P-201ENST00000384371 107 ntBASIC2.35□□□□□ -2.03
RNF41Q9H4P4 RNU6-658P-201ENST00000384606 106 ntBASIC2.35□□□□□ -2.03
RNF41Q9H4P4 MIR518D-201ENST00000385014 87 ntBASIC2.35□□□□□ -2.03
RNF41Q9H4P4 CISD1P1-201ENST00000393907 327 ntBASIC2.35□□□□□ -2.03
RNF41Q9H4P4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 RNU6-1025P-201ENST00000410629 104 ntBASIC2.35□□□□□ -2.03
RNF41Q9H4P4 AL663109.1-201ENST00000411498 844 ntBASIC2.35□□□□□ -2.03
RNF41Q9H4P4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 AC010975.2-201ENST00000427781 588 ntBASIC2.35□□□□□ -2.03
RNF41Q9H4P4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 DPPA3P1-201ENST00000448050 469 ntBASIC2.35□□□□□ -2.03
RNF41Q9H4P4 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 RPS15AP34-201ENST00000487776 387 ntBASIC2.35□□□□□ -2.03
RNF41Q9H4P4 AC090255.1-201ENST00000495779 349 ntBASIC2.35□□□□□ -2.03
RNF41Q9H4P4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 GLYCAM1-201ENST00000546596 285 ntBASIC2.35□□□□□ -2.03
RNF41Q9H4P4 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 AC002984.1-201ENST00000591692 448 ntBASIC2.35□□□□□ -2.03
RNF41Q9H4P4 AC005261.5-201ENST00000596280 355 ntBASIC2.35□□□□□ -2.03
RNF41Q9H4P4 AC068790.2-201ENST00000602601 557 ntBASIC2.35□□□□□ -2.03
RNF41Q9H4P4 AL391646.1-201ENST00000603860 190 ntBASIC2.35□□□□□ -2.03
RNF41Q9H4P4 Z84480.1-201ENST00000605131 311 ntBASIC2.35□□□□□ -2.03
RNF41Q9H4P4 AL158032.1-201ENST00000605401 106 ntBASIC2.35□□□□□ -2.03
RNF41Q9H4P4 NDUFA8P1-201ENST00000605525 367 ntBASIC2.35□□□□□ -2.03
RNF41Q9H4P4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RNF41Q9H4P4 Y_RNA.33-201ENST00000362591 102 ntBASIC2.34□□□□□ -2.03
RNF41Q9H4P4 RNA5SP160-201ENST00000364866 120 ntBASIC2.34□□□□□ -2.03
RNF41Q9H4P4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.34□□□□□ -2.03
RNF41Q9H4P4 RNU6-456P-201ENST00000384493 107 ntBASIC2.34□□□□□ -2.03
RNF41Q9H4P4 MIR144-201ENST00000384886 86 ntBASIC2.34□□□□□ -2.03
RNF41Q9H4P4 MIR767-201ENST00000390228 109 ntBASIC2.34□□□□□ -2.03
RNF41Q9H4P4 GSTA9P-201ENST00000406231 611 ntBASIC2.34□□□□□ -2.03
RNF41Q9H4P4 MTCO2P19-201ENST00000427513 598 ntBASIC2.34□□□□□ -2.03
RNF41Q9H4P4 DLGAP5P1-201ENST00000430307 464 ntBASIC2.34□□□□□ -2.03
RNF41Q9H4P4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.34□□□□□ -2.03
RNF41Q9H4P4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.34□□□□□ -2.03
RNF41Q9H4P4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.34□□□□□ -2.03
RNF41Q9H4P4 DNAJC19P4-201ENST00000440115 345 ntBASIC2.34□□□□□ -2.03
RNF41Q9H4P4 RPL23AP7-203ENST00000449021 469 ntBASIC2.34□□□□□ -2.03
RNF41Q9H4P4 AC108078.1-201ENST00000508073 725 ntBASIC2.34□□□□□ -2.03
RNF41Q9H4P4 MRPS36P2-201ENST00000512569 299 ntBASIC2.34□□□□□ -2.03
RNF41Q9H4P4 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.34□□□□□ -2.03
RNF41Q9H4P4 RNU6-572P-201ENST00000516724 80 ntBASIC2.34□□□□□ -2.03
RNF41Q9H4P4 SNORA31.19-201ENST00000517079 126 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms