Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 MIR758-201ENST00000390227 88 ntBASIC1.2□□□□□ -2.22
MED28Q9H204 RNU2-62P-201ENST00000410868 191 ntBASIC1.2□□□□□ -2.22
MED28Q9H204 SRIP3-201ENST00000413200 219 ntBASIC1.2□□□□□ -2.22
MED28Q9H204 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.2□□□□□ -2.22
MED28Q9H204 USP9YP18-201ENST00000425912 695 ntBASIC1.2□□□□□ -2.22
MED28Q9H204 AL035407.1-201ENST00000429211 571 ntBASIC1.2□□□□□ -2.22
MED28Q9H204 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.2□□□□□ -2.22
MED28Q9H204 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.2□□□□□ -2.22
MED28Q9H204 AC118469.1-201ENST00000442943 488 ntBASIC1.2□□□□□ -2.22
MED28Q9H204 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
MED28Q9H204 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.2□□□□□ -2.22
MED28Q9H204 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.2□□□□□ -2.22
MED28Q9H204 AMD1P1-201ENST00000457220 922 ntBASIC1.2□□□□□ -2.22
MED28Q9H204 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.2□□□□□ -2.22
MED28Q9H204 AP001025.1-201ENST00000486139 332 ntBASIC1.2□□□□□ -2.22
MED28Q9H204 AC098799.1-201ENST00000504752 800 ntBASIC1.2□□□□□ -2.22
MED28Q9H204 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.2□□□□□ -2.22
MED28Q9H204 RNU6-1092P-201ENST00000516955 87 ntBASIC1.2□□□□□ -2.22
MED28Q9H204 SNORA44.1-201ENST00000517031 108 ntBASIC1.2□□□□□ -2.22
MED28Q9H204 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.2□□□□□ -2.22
MED28Q9H204 AC023050.2-201ENST00000544968 387 ntBASIC1.2□□□□□ -2.22
MED28Q9H204 AC010900.2-201ENST00000604508 210 ntBASIC1.2□□□□□ -2.22
MED28Q9H204 AL592221.1-201ENST00000605266 382 ntBASIC1.2□□□□□ -2.22
MED28Q9H204 AC080013.3-201ENST00000606839 578 ntBASIC1.2□□□□□ -2.22
MED28Q9H204 AL022345.1-201ENST00000607292 135 ntBASIC1.2□□□□□ -2.22
MED28Q9H204 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.2□□□□□ -2.22
MED28Q9H204 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.2□□□□□ -2.22
MED28Q9H204 uc_338.12-201ENST00000616344 181 ntBASIC1.2□□□□□ -2.22
MED28Q9H204 AC099842.1-201ENST00000619919 596 ntBASIC1.2□□□□□ -2.22
MED28Q9H204 MIR7843-201ENST00000622274 79 ntBASIC1.2□□□□□ -2.22
MED28Q9H204 AL138960.2-201ENST00000625145 535 ntBASIC1.2□□□□□ -2.22
MED28Q9H204 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.2□□□□□ -2.22
MED28Q9H204 AC092104.1-201ENST00000497346 1441 ntBASIC1.2□□□□□ -2.22
MED28Q9H204 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
MED28Q9H204 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
MED28Q9H204 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
MED28Q9H204 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.19□□□□□ -2.22
MED28Q9H204 RNU6-946P-201ENST00000383878 107 ntBASIC1.19□□□□□ -2.22
MED28Q9H204 RNU6-338P-201ENST00000383888 105 ntBASIC1.19□□□□□ -2.22
MED28Q9H204 MIR30A-201ENST00000385092 71 ntBASIC1.19□□□□□ -2.22
MED28Q9H204 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
MED28Q9H204 SNORA40.4-201ENST00000390971 128 ntBASIC1.19□□□□□ -2.22
MED28Q9H204 CBX3P9-201ENST00000402326 552 ntBASIC1.19□□□□□ -2.22
MED28Q9H204 Y_RNA.623-201ENST00000411128 95 ntBASIC1.19□□□□□ -2.22
MED28Q9H204 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.19□□□□□ -2.22
MED28Q9H204 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.19□□□□□ -2.22
MED28Q9H204 snoU109.2-201ENST00000459316 135 ntBASIC1.19□□□□□ -2.22
MED28Q9H204 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.19□□□□□ -2.22
MED28Q9H204 AC119751.4-201ENST00000507498 357 ntBASIC1.19□□□□□ -2.22
MED28Q9H204 RN7SKP179-201ENST00000516126 217 ntBASIC1.19□□□□□ -2.22
MED28Q9H204 RN7SKP256-201ENST00000517201 314 ntBASIC1.19□□□□□ -2.22
MED28Q9H204 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.19□□□□□ -2.22
MED28Q9H204 AC018630.3-201ENST00000542637 96 ntBASIC1.19□□□□□ -2.22
MED28Q9H204 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.19□□□□□ -2.22
MED28Q9H204 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.19□□□□□ -2.22
MED28Q9H204 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.19□□□□□ -2.22
MED28Q9H204 AC012065.4-201ENST00000602445 679 ntBASIC1.19□□□□□ -2.22
MED28Q9H204 AL391001.1-201ENST00000602747 715 ntBASIC1.19□□□□□ -2.22
MED28Q9H204 WISP1-OT1-201ENST00000602893 642 ntBASIC1.19□□□□□ -2.22
MED28Q9H204 CYP2C61P-201ENST00000604072 290 ntBASIC1.19□□□□□ -2.22
MED28Q9H204 AC108747.1-201ENST00000609508 535 ntBASIC1.19□□□□□ -2.22
MED28Q9H204 AC103710.2-201ENST00000609912 942 ntBASIC1.19□□□□□ -2.22
MED28Q9H204 AC087241.4-201ENST00000612441 480 ntBASIC1.19□□□□□ -2.22
MED28Q9H204 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.19□□□□□ -2.22
MED28Q9H204 ZNF680P1-201ENST00000436625 1469 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 AL161722.3-201ENST00000605789 2983 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 MIR424-201ENST00000362227 98 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 Y_RNA.46-201ENST00000362695 102 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 RNU6-1210P-201ENST00000363775 107 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 RNU6-190P-201ENST00000384154 102 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 RNU6-72P-201ENST00000384285 79 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 MIR150-201ENST00000385048 84 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
MED28Q9H204 RNU2-41P-201ENST00000410991 178 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.18□□□□□ -2.22
MED28Q9H204 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.18□□□□□ -2.22
MED28Q9H204 MTND3P1-201ENST00000441336 220 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 SNRPGP13-201ENST00000442212 177 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.18□□□□□ -2.22
MED28Q9H204 FDX1P2-201ENST00000450769 375 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 snoU13.14-201ENST00000459372 104 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 FAM206BP-201ENST00000510179 541 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.18□□□□□ -2.22
MED28Q9H204 Y_RNA.689-201ENST00000516589 107 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 RNU6-965P-201ENST00000516721 96 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 COPS8P3-201ENST00000526024 482 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 AK6P1-201ENST00000540219 478 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.18□□□□□ -2.22
MED28Q9H204 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
MED28Q9H204 AL022154.1-201ENST00000604698 785 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 AL670379.2-201ENST00000604983 252 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 AL670379.4-201ENST00000605279 254 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.18□□□□□ -2.22
MED28Q9H204 AL355816.2-201ENST00000610049 647 ntBASIC1.18□□□□□ -2.22
MED28Q9H204 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
MED28Q9H204 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
MED28Q9H204 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
MED28Q9H204 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
MED28Q9H204 RNU6-960P-201ENST00000364056 120 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms