Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 Y_RNA.7-201ENST00000362352 102 ntBASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 RNU6-1298P-201ENST00000362456 101 ntBASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 Y_RNA.71-201ENST00000362892 104 ntBASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 Y_RNA.238-201ENST00000364441 102 ntBASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 MIR93-201ENST00000385024 80 ntBASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 MIR153-2-201ENST00000385225 87 ntBASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 AC091390.3-201ENST00000426478 338 ntBASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 CYCSP32-201ENST00000440548 321 ntBASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 AL353748.1-201ENST00000440753 474 ntBASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 AL137159.1-201ENST00000452808 512 ntBASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 AC091179.1-201ENST00000461606 579 ntBASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 RPS27AP9-201ENST00000477681 438 ntBASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 AL049874.1-201ENST00000489560 388 ntBASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 SUMO2P18-201ENST00000518873 252 ntBASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 AC112693.2-201ENST00000556538 232 ntBASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 TGIF1P1-201ENST00000558095 802 ntBASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 CYP4A43P-201ENST00000568156 121 ntBASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 MIR4716-201ENST00000579628 84 ntBASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 AC008745.1-201ENST00000604064 271 ntBASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NUCKS1Q9H1E3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 NOL8P1-201ENST00000508336 3529 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 Y_RNA.75-201ENST00000362927 97 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 SNORD113.2-201ENST00000364166 89 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 SNORD116-14-201ENST00000383894 92 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 SNORD116-17-201ENST00000383929 92 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 SNORD116-15-201ENST00000384445 92 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 SNORD116-20-201ENST00000384529 92 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 SNORD116-19-201ENST00000384729 92 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 MIR34A-201ENST00000385130 110 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 RNA5SP397-201ENST00000391323 118 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 RNU2-2P-201ENST00000410396 191 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 AC245028.1-201ENST00000423259 256 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 RPS12P10-201ENST00000427031 377 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 AL512844.2-201ENST00000433990 593 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 RPL23AP93-201ENST00000440847 484 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 RPL23AP49-201ENST00000492925 468 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 AL592156.1-201ENST00000508758 304 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 AC108043.1-201ENST00000512696 574 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 AC055872.1-201ENST00000570978 278 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 MIR548X2-201ENST00000579776 100 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 RNU2-4P-201ENST00000606190 192 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 U2.15-201ENST00000611544 191 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 U2.16-201ENST00000613119 191 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 U2.12-201ENST00000613778 191 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 U2.9-201ENST00000615427 191 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 U2.11-201ENST00000616345 191 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 U2.2-201ENST00000616535 191 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 U2.3-201ENST00000617785 191 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 U2.19-201ENST00000618602 191 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 RNU2-1-201ENST00000618664 191 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 U2.6-201ENST00000619225 191 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 U2.5-201ENST00000619465 191 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 U2.10-201ENST00000620268 191 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 snoU18.1-201ENST00000629629 71 ntBASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.8□□□□□ -1.64
NUCKS1Q9H1E3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NUCKS1Q9H1E3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NUCKS1Q9H1E3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NUCKS1Q9H1E3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NUCKS1Q9H1E3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NUCKS1Q9H1E3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.79□□□□□ -1.64
NUCKS1Q9H1E3 RNA5SP197-201ENST00000363357 119 ntBASIC4.79□□□□□ -1.64
NUCKS1Q9H1E3 RNU6-166P-201ENST00000384371 107 ntBASIC4.79□□□□□ -1.64
NUCKS1Q9H1E3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.79□□□□□ -1.64
NUCKS1Q9H1E3 SNORA40C-201ENST00000391285 128 ntBASIC4.79□□□□□ -1.64
NUCKS1Q9H1E3 RNU2-52P-201ENST00000410680 190 ntBASIC4.79□□□□□ -1.64
NUCKS1Q9H1E3 Y_RNA.625-201ENST00000411256 107 ntBASIC4.79□□□□□ -1.64
NUCKS1Q9H1E3 MTND4LP9-201ENST00000427694 174 ntBASIC4.79□□□□□ -1.64
NUCKS1Q9H1E3 WARS2P1-201ENST00000429678 537 ntBASIC4.79□□□□□ -1.64
NUCKS1Q9H1E3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.79□□□□□ -1.64
NUCKS1Q9H1E3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.79□□□□□ -1.64
NUCKS1Q9H1E3 AF186996.7-201ENST00000492781 209 ntBASIC4.79□□□□□ -1.64
NUCKS1Q9H1E3 AC097462.2-201ENST00000504623 481 ntBASIC4.79□□□□□ -1.64
NUCKS1Q9H1E3 BTF3L4P4-201ENST00000506381 449 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms