Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 Y_RNA.661-201ENST00000516003 99 ntBASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 MTCO3P13-201ENST00000577757 781 ntBASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 SNRPGP17-201ENST00000603780 214 ntBASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 uc_338.22-201ENST00000622722 187 ntBASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 AC138627.2-201ENST00000624202 601 ntBASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 AL034408.1-202ENST00000636088 415 ntBASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC113Q9H0I3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 AC004944.1-201ENST00000517807 3059 ntBASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 CDC27P3-201ENST00000635418 1910 ntBASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 MIR423-201ENST00000362201 94 ntBASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 RNU6-490P-201ENST00000362985 107 ntBASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 RNU6-942P-201ENST00000363002 107 ntBASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 Y_RNA.132-201ENST00000363421 102 ntBASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 RNU6-174P-201ENST00000410406 106 ntBASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 AC096664.2-201ENST00000411843 406 ntBASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 BX276092.3-201ENST00000424182 230 ntBASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 AL714022.1-201ENST00000439897 151 ntBASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 RNU7-23P-201ENST00000459465 62 ntBASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 AC106707.2-201ENST00000484182 374 ntBASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 MRPL42P6-201ENST00000486397 371 ntBASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 AC096576.1-201ENST00000489014 359 ntBASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 RN7SKP209-201ENST00000516888 304 ntBASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 SNORA31.18-201ENST00000517043 134 ntBASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 RNU6-988P-201ENST00000519081 107 ntBASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 AC005046.1-201ENST00000608515 625 ntBASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 AC009093.8-201ENST00000641769 292 ntBASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 HSPA8P1-201ENST00000425843 1833 ntBASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CCDC113Q9H0I3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 MFSD8-236ENST00000641509 4050 ntBASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 SNORD9-201ENST00000362566 104 ntBASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 RNU6-105P-201ENST00000363909 104 ntBASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 Y_RNA.422-201ENST00000384054 114 ntBASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 SNORA41-201ENST00000384675 132 ntBASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 MIR449B-201ENST00000384995 97 ntBASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 RNA5SP171-201ENST00000391071 115 ntBASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 RNA5SP252-201ENST00000391131 119 ntBASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 BTF3L4P2-201ENST00000392798 346 ntBASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 RPS29P13-201ENST00000402041 169 ntBASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 FTH1P15-201ENST00000406984 280 ntBASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 HMGN2P20-201ENST00000437531 273 ntBASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 AL031183.1-201ENST00000457667 207 ntBASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 AL049830.2-201ENST00000480072 201 ntBASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 FO393415.2-201ENST00000480085 343 ntBASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 AC006199.1-201ENST00000548728 219 ntBASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 CR383656.8-201ENST00000549046 145 ntBASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 MIR5047-201ENST00000579212 100 ntBASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 AC024220.1-201ENST00000603675 484 ntBASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 AC097372.5-201ENST00000623665 376 ntBASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 AL732372.2-225ENST00000642124 456 ntBASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.01□□□□□ -1.77
CCDC113Q9H0I3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
CCDC113Q9H0I3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4□□□□□ -1.77
CCDC113Q9H0I3 AC233263.6-201ENST00000631132 1963 ntBASIC4□□□□□ -1.77
CCDC113Q9H0I3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4□□□□□ -1.77
CCDC113Q9H0I3 Y_RNA.48-201ENST00000362710 103 ntBASIC4□□□□□ -1.77
CCDC113Q9H0I3 RNU6-227P-201ENST00000362865 103 ntBASIC4□□□□□ -1.77
CCDC113Q9H0I3 IARS-201ENST00000375627 697 ntTSL 3 BASIC4□□□□□ -1.77
CCDC113Q9H0I3 MIR23B-201ENST00000384832 97 ntBASIC4□□□□□ -1.77
CCDC113Q9H0I3 MIR200C-201ENST00000384980 68 ntBASIC4□□□□□ -1.77
CCDC113Q9H0I3 RNU6-308P-201ENST00000390957 107 ntBASIC4□□□□□ -1.77
CCDC113Q9H0I3 AL591034.2-201ENST00000402839 359 ntBASIC4□□□□□ -1.77
CCDC113Q9H0I3 RNU6-55P-201ENST00000411092 107 ntBASIC4□□□□□ -1.77
CCDC113Q9H0I3 CYCSP4-201ENST00000429682 331 ntBASIC4□□□□□ -1.77
CCDC113Q9H0I3 RPS15AP5-201ENST00000436276 388 ntBASIC4□□□□□ -1.77
CCDC113Q9H0I3 RPL21P23-201ENST00000446654 460 ntBASIC4□□□□□ -1.77
CCDC113Q9H0I3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4□□□□□ -1.77
CCDC113Q9H0I3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4□□□□□ -1.77
CCDC113Q9H0I3 RN7SKP18-201ENST00000516005 275 ntBASIC4□□□□□ -1.77
CCDC113Q9H0I3 Y_RNA.711-201ENST00000516993 102 ntBASIC4□□□□□ -1.77
CCDC113Q9H0I3 ELOCP31-201ENST00000540463 467 ntBASIC4□□□□□ -1.77
CCDC113Q9H0I3 MIR4474-201ENST00000579189 78 ntBASIC4□□□□□ -1.77
CCDC113Q9H0I3 BNIP3P16-201ENST00000589779 534 ntBASIC4□□□□□ -1.77
CCDC113Q9H0I3 AC006504.6-201ENST00000590142 199 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms