Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AL022345.1-201ENST00000607292 135 ntBASIC1.15□□□□□ -2.23
NKX6-2Q9C056 AC006338.1-201ENST00000618453 749 ntBASIC1.15□□□□□ -2.23
NKX6-2Q9C056 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.15□□□□□ -2.23
NKX6-2Q9C056 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
NKX6-2Q9C056 RNU6-942P-201ENST00000363002 107 ntBASIC1.14□□□□□ -2.23
NKX6-2Q9C056 RNU6-1210P-201ENST00000363775 107 ntBASIC1.14□□□□□ -2.23
NKX6-2Q9C056 RNU6-946P-201ENST00000383878 107 ntBASIC1.14□□□□□ -2.23
NKX6-2Q9C056 RNU6-338P-201ENST00000383888 105 ntBASIC1.14□□□□□ -2.23
NKX6-2Q9C056 RNU6-622P-201ENST00000384272 103 ntBASIC1.14□□□□□ -2.23
NKX6-2Q9C056 SNORD116-20-201ENST00000384529 92 ntBASIC1.14□□□□□ -2.23
NKX6-2Q9C056 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.14□□□□□ -2.23
NKX6-2Q9C056 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.14□□□□□ -2.23
NKX6-2Q9C056 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.14□□□□□ -2.23
NKX6-2Q9C056 AC007677.1-201ENST00000445757 515 ntBASIC1.14□□□□□ -2.23
NKX6-2Q9C056 AC104058.1-201ENST00000448028 297 ntBASIC1.14□□□□□ -2.23
NKX6-2Q9C056 AC005908.1-201ENST00000468701 347 ntBASIC1.14□□□□□ -2.23
NKX6-2Q9C056 AC119751.4-201ENST00000507498 357 ntBASIC1.14□□□□□ -2.23
NKX6-2Q9C056 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.14□□□□□ -2.23
NKX6-2Q9C056 AC023050.2-201ENST00000544968 387 ntBASIC1.14□□□□□ -2.23
NKX6-2Q9C056 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.14□□□□□ -2.23
NKX6-2Q9C056 AC136618.2-201ENST00000575091 400 ntBASIC1.14□□□□□ -2.23
NKX6-2Q9C056 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.14□□□□□ -2.23
NKX6-2Q9C056 MIR3146-201ENST00000580367 79 ntBASIC1.14□□□□□ -2.23
NKX6-2Q9C056 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.14□□□□□ -2.23
NKX6-2Q9C056 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.14□□□□□ -2.23
NKX6-2Q9C056 AL158042.1-201ENST00000605338 460 ntBASIC1.14□□□□□ -2.23
NKX6-2Q9C056 U1.36-201ENST00000620684 176 ntBASIC1.14□□□□□ -2.23
NKX6-2Q9C056 AC024940.5-201ENST00000622889 474 ntBASIC1.14□□□□□ -2.23
NKX6-2Q9C056 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.14□□□□□ -2.23
NKX6-2Q9C056 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.14□□□□□ -2.23
NKX6-2Q9C056 FARSBP1-201ENST00000435808 1778 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
NKX6-2Q9C056 MTND4P16-201ENST00000466108 1367 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 ZNF29P-201ENST00000225587 168 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 snoU2_19.1-201ENST00000362361 80 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 Y_RNA.46-201ENST00000362695 102 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 U8.1-201ENST00000362843 134 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 RNU6-511P-201ENST00000363496 107 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 RNU5E-10P-201ENST00000363506 118 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 RNA5SP387-201ENST00000364226 106 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 RNU6-72P-201ENST00000384285 79 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 MIR30A-201ENST00000385092 71 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 MIR758-201ENST00000390227 88 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 SNORA40.18-201ENST00000391200 128 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
NKX6-2Q9C056 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
NKX6-2Q9C056 Y_RNA.623-201ENST00000411128 95 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.13□□□□□ -2.23
NKX6-2Q9C056 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.13□□□□□ -2.23
NKX6-2Q9C056 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.13□□□□□ -2.23
NKX6-2Q9C056 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.13□□□□□ -2.23
NKX6-2Q9C056 CALM1P1-201ENST00000442082 433 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.13□□□□□ -2.23
NKX6-2Q9C056 FDX1P2-201ENST00000450769 375 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
NKX6-2Q9C056 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.13□□□□□ -2.23
NKX6-2Q9C056 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.13□□□□□ -2.23
NKX6-2Q9C056 AP001025.1-201ENST00000486139 332 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.13□□□□□ -2.23
NKX6-2Q9C056 AC114801.2-201ENST00000503825 781 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 RNU6-991P-201ENST00000516168 107 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 Y_RNA.689-201ENST00000516589 107 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 RNU6-467P-201ENST00000517027 110 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 SNORA44.1-201ENST00000517031 108 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 AC109329.1-201ENST00000518744 317 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.13□□□□□ -2.23
NKX6-2Q9C056 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.13□□□□□ -2.23
NKX6-2Q9C056 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.13□□□□□ -2.23
NKX6-2Q9C056 AC123904.2-201ENST00000548059 300 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 MIR4435-1-201ENST00000582552 80 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.13□□□□□ -2.23
NKX6-2Q9C056 AL391001.1-201ENST00000602747 715 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 AL355816.2-201ENST00000610049 647 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.13□□□□□ -2.23
NKX6-2Q9C056 uc_338.12-201ENST00000616344 181 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 AC099842.1-201ENST00000619919 596 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 AC093648.1-201ENST00000623546 606 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 IGHVIII-44-202ENST00000636235 289 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.13□□□□□ -2.23
NKX6-2Q9C056 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.12□□□□□ -2.23
NKX6-2Q9C056 MTND4P23-201ENST00000447723 1363 ntBASIC1.12□□□□□ -2.23
NKX6-2Q9C056 RNU6-487P-201ENST00000365430 104 ntBASIC1.12□□□□□ -2.23
NKX6-2Q9C056 RNU5E-6P-201ENST00000365574 115 ntBASIC1.12□□□□□ -2.23
NKX6-2Q9C056 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
NKX6-2Q9C056 MIR10A-201ENST00000385043 110 ntBASIC1.12□□□□□ -2.23
NKX6-2Q9C056 SNORA40.4-201ENST00000390971 128 ntBASIC1.12□□□□□ -2.23
NKX6-2Q9C056 SNORA3.2-201ENST00000408221 125 ntBASIC1.12□□□□□ -2.23
NKX6-2Q9C056 RNA5SP508-201ENST00000411327 119 ntBASIC1.12□□□□□ -2.23
NKX6-2Q9C056 SRIP3-201ENST00000413200 219 ntBASIC1.12□□□□□ -2.23
NKX6-2Q9C056 MTCO3P5-201ENST00000433620 714 ntBASIC1.12□□□□□ -2.23
NKX6-2Q9C056 AL353752.1-201ENST00000454946 260 ntBASIC1.12□□□□□ -2.23
NKX6-2Q9C056 RNVU1-2-201ENST00000516326 135 ntBASIC1.12□□□□□ -2.23
NKX6-2Q9C056 MIR4648-201ENST00000580107 72 ntBASIC1.12□□□□□ -2.23
NKX6-2Q9C056 WISP1-OT1-201ENST00000602893 642 ntBASIC1.12□□□□□ -2.23
NKX6-2Q9C056 AL050343.2-201ENST00000607338 280 ntBASIC1.12□□□□□ -2.23
NKX6-2Q9C056 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.12□□□□□ -2.23
NKX6-2Q9C056 FRG1KP-201ENST00000623592 341 ntBASIC1.12□□□□□ -2.23
NKX6-2Q9C056 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms