Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC008785.1-201ENST00000624475 456 ntBASIC3.5□□□□□ -1.85
SSBP3Q9BWW4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SSBP3Q9BWW4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.5□□□□□ -1.85
SSBP3Q9BWW4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SSBP3Q9BWW4 AC011266.1-201ENST00000624119 3569 ntBASIC3.5□□□□□ -1.85
SSBP3Q9BWW4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 Y_RNA.82-201ENST00000363000 102 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 Y_RNA.92-201ENST00000363043 102 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 Y_RNA.235-201ENST00000364412 102 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 Y_RNA.286-201ENST00000364813 102 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 RNU6-336P-201ENST00000364891 107 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 Y_RNA.306-201ENST00000365015 102 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 Y_RNA.312-201ENST00000365089 102 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 Y_RNA.322-201ENST00000365151 102 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 Y_RNA.398-201ENST00000383952 99 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 RNU6-968P-201ENST00000384076 107 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 RNU6-17P-201ENST00000384245 107 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 RNU6-18P-201ENST00000384527 107 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 RNU6-918P-201ENST00000391219 106 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 AC091390.3-201ENST00000426478 338 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 HLA-N-201ENST00000437516 135 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 ABCF2P2-201ENST00000450549 296 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 Y_RNA.650-201ENST00000459002 102 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 MLLT10P2-201ENST00000506434 249 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 RN7SKP21-201ENST00000516503 220 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 Y_RNA.777-201ENST00000516982 102 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 SNORA31.18-201ENST00000517043 134 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 RNA5SP290-201ENST00000517133 127 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 AK6P2-201ENST00000549020 471 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 Y_RNA.771-201ENST00000598668 102 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 AL365265.1-201ENST00000621045 234 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 Y_RNA.789-201ENST00000622480 102 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 AC112484.5-201ENST00000624189 228 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 SCARNA4-201ENST00000629045 128 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 U4.7-201ENST00000638126 106 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 AC009541.1-201ENST00000438279 2662 ntBASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SSBP3Q9BWW4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 AL365440.1-201ENST00000436135 2167 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 SPRR2C-201ENST00000290702 219 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 UBE2WP1-201ENST00000362030 340 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 MIR93-201ENST00000385024 80 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 SNORA40C-201ENST00000391285 128 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 RPS4XP3-201ENST00000398541 413 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 RNA5SP317-201ENST00000410176 116 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 RNU6-651P-201ENST00000411040 105 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 RNA5SP311-201ENST00000411290 116 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 AL353705.4-201ENST00000449661 238 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 AC007395.1-201ENST00000451333 677 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 RNA5SP246-201ENST00000458909 119 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 AL049830.2-201ENST00000480072 201 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 RPL23AP75-201ENST00000491601 451 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 RN7SL604P-201ENST00000492589 296 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 AC146944.2-203ENST00000502493 354 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 AC139495.1-202ENST00000513164 354 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 RNA5SP315-201ENST00000516340 116 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 RNA5SP312-201ENST00000517068 116 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 SNORA31.19-201ENST00000517079 126 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 MIR3160-1-201ENST00000577972 85 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 FAM60BP-201ENST00000578364 658 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 AC010928.2-201ENST00000588017 287 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 AL020997.2-201ENST00000602607 184 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 AC011921.3-201ENST00000605540 361 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 AC108706.1-201ENST00000611053 297 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 RMST_6.1-201ENST00000611980 203 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 MIR6715B-201ENST00000637172 77 ntBASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SSBP3Q9BWW4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms