Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL079305.1-201ENST00000623159 3008 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SNX18Q96RF0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.23□□□□□ -1.89
SNX18Q96RF0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.23□□□□□ -1.89
SNX18Q96RF0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SNX18Q96RF0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SNX18Q96RF0 Y_RNA.148-201ENST00000363557 117 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 SNORD46.1-201ENST00000364139 104 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 RNA5SP387-201ENST00000364226 106 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 SNORA70.4-201ENST00000365509 134 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 SNORA5A-201ENST00000384111 134 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 Y_RNA.463-201ENST00000384271 102 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 RNU6-166P-201ENST00000384371 107 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 RNU6-790P-201ENST00000384479 105 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 AL591034.1-201ENST00000407447 340 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 RNA5SP44-201ENST00000410446 133 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 AC093578.1-201ENST00000415219 368 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 AC113618.1-201ENST00000416747 285 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 SYF2P2-201ENST00000417620 583 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX18Q96RF0 AC098614.2-201ENST00000426040 255 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 RPL23AP50-201ENST00000434149 455 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 AL078601.1-201ENST00000444542 271 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 AL035666.1-201ENST00000446195 348 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 AL031274.1-201ENST00000450334 232 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 AC092798.1-201ENST00000458542 409 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 AC084357.1-201ENST00000473404 255 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.23□□□□□ -1.89
SNX18Q96RF0 AC113155.1-201ENST00000511141 769 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 RNU1-95P-201ENST00000516357 160 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 SNORA64.4-201ENST00000516632 81 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 RNU1-128P-201ENST00000516704 160 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.23□□□□□ -1.89
SNX18Q96RF0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.23□□□□□ -1.89
SNX18Q96RF0 DNAJC8P1-201ENST00000554535 372 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 AC109446.1-201ENST00000566172 220 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 BNIP3P16-201ENST00000589779 534 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SNX18Q96RF0 AL645944.1-201ENST00000603857 493 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.23□□□□□ -1.89
SNX18Q96RF0 AC012314.7-201ENST00000619693 93 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 AP003355.3-201ENST00000623465 114 ntBASIC3.23□□□□□ -1.89
SNX18Q96RF0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SNX18Q96RF0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
SNX18Q96RF0 ZNF807-201ENST00000328088 1707 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SNX18Q96RF0 AC022336.2-201ENST00000568966 2538 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 Y_RNA.145-201ENST00000363527 102 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 RPL21P17-201ENST00000397467 475 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 RNU6-325P-201ENST00000411132 105 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 AL096701.2-201ENST00000416920 238 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX18Q96RF0 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX18Q96RF0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SNX18Q96RF0 AC091286.1-201ENST00000431233 461 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 AL160004.2-201ENST00000432935 350 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 RPL21P23-201ENST00000446654 460 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SNX18Q96RF0 RN7SL594P-201ENST00000470590 287 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 AC021205.2-201ENST00000480069 347 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 AC022493.2-201ENST00000506122 481 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 RNU6-470P-201ENST00000515954 104 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SNX18Q96RF0 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX18Q96RF0 AC026403.1-201ENST00000518938 295 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 AC104027.1-201ENST00000521887 300 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SNX18Q96RF0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.22□□□□□ -1.89
SNX18Q96RF0 TRAV32-201ENST00000553993 340 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.22□□□□□ -1.89
SNX18Q96RF0 MIR4506-201ENST00000584693 77 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 AP001836.1-201ENST00000604675 523 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 AC006077.1-201ENST00000604746 343 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 AC069200.1-201ENST00000609511 323 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 AC083806.3-201ENST00000614016 455 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 AC084757.4-201ENST00000616350 526 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 AC007485.1-201ENST00000616755 206 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 AC138627.2-201ENST00000624202 601 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 AC009093.8-201ENST00000641769 292 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
SNX18Q96RF0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SNX18Q96RF0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.22□□□□□ -1.89
SNX18Q96RF0 AC068647.1-201ENST00000489539 2265 ntBASIC3.22□□□□□ -1.89
SNX18Q96RF0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SNX18Q96RF0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
SNX18Q96RF0 AC008264.2-201ENST00000610193 3731 ntBASIC3.21□□□□□ -1.89
SNX18Q96RF0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.21□□□□□ -1.9
SNX18Q96RF0 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.21□□□□□ -1.9
SNX18Q96RF0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SNX18Q96RF0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.21□□□□□ -1.9
SNX18Q96RF0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SNX18Q96RF0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SNX18Q96RF0 SNORA63.1-201ENST00000362493 131 ntBASIC3.21□□□□□ -1.9
SNX18Q96RF0 Y_RNA.459-201ENST00000384251 102 ntBASIC3.21□□□□□ -1.9
SNX18Q96RF0 MIR34A-201ENST00000385130 110 ntBASIC3.21□□□□□ -1.9
SNX18Q96RF0 RN7SKP53-201ENST00000411337 315 ntBASIC3.21□□□□□ -1.9
SNX18Q96RF0 SNORD56-201ENST00000413522 71 ntBASIC3.21□□□□□ -1.9
SNX18Q96RF0 MCFD2P1-201ENST00000417812 300 ntBASIC3.21□□□□□ -1.9
SNX18Q96RF0 AL035423.1-201ENST00000420331 213 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms