Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.99□□□□□ -2.09
RPRD1AQ96P16 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.99□□□□□ -2.09
RPRD1AQ96P16 AC119618.1-201ENST00000434191 222 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.99□□□□□ -2.09
RPRD1AQ96P16 ZNF114P1-201ENST00000453500 292 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.99□□□□□ -2.09
RPRD1AQ96P16 MTCO2P29-201ENST00000465212 189 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 AP000797.1-201ENST00000478870 387 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 AC018868.1-201ENST00000491307 315 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 AC117522.2-201ENST00000510049 657 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.99□□□□□ -2.09
RPRD1AQ96P16 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.99□□□□□ -2.09
RPRD1AQ96P16 SNORA4.4-201ENST00000515921 135 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 SNORA48.11-201ENST00000517015 89 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.99□□□□□ -2.09
RPRD1AQ96P16 MIR3126-201ENST00000577443 74 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 AL158827.2-201ENST00000602494 330 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 DEFB131E-202ENST00000602581 683 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 AC005034.5-201ENST00000604219 466 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 AC093788.1-201ENST00000609356 927 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 AL359547.2-201ENST00000615810 418 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 AC027807.2-201ENST00000616099 408 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 MIR7844-201ENST00000616161 122 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.99□□□□□ -2.09
RPRD1AQ96P16 AC017037.3-201ENST00000625016 472 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 AL691447.3-201ENST00000635020 330 ntBASIC1.99□□□□□ -2.09
RPRD1AQ96P16 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RPRD1AQ96P16 ZNF355P-201ENST00000427301 3216 ntBASIC1.98□□□□□ -2.09
RPRD1AQ96P16 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RPRD1AQ96P16 MIR412-201ENST00000362142 91 ntBASIC1.98□□□□□ -2.09
RPRD1AQ96P16 RNU5E-1-201ENST00000362477 120 ntBASIC1.98□□□□□ -2.09
RPRD1AQ96P16 SNORD14B-201ENST00000364533 90 ntBASIC1.98□□□□□ -2.09
RPRD1AQ96P16 MIR1289-2-201ENST00000408360 111 ntBASIC1.98□□□□□ -2.09
RPRD1AQ96P16 AL589872.1-201ENST00000426602 288 ntBASIC1.98□□□□□ -2.09
RPRD1AQ96P16 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.98□□□□□ -2.09
RPRD1AQ96P16 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.98□□□□□ -2.09
RPRD1AQ96P16 snoU109.2-201ENST00000459316 135 ntBASIC1.98□□□□□ -2.09
RPRD1AQ96P16 HMGB3P17-201ENST00000504195 649 ntBASIC1.98□□□□□ -2.09
RPRD1AQ96P16 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
RPRD1AQ96P16 RNU6-415P-201ENST00000516252 97 ntBASIC1.98□□□□□ -2.09
RPRD1AQ96P16 RNA5SP137-201ENST00000516833 135 ntBASIC1.98□□□□□ -2.09
RPRD1AQ96P16 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.98□□□□□ -2.09
RPRD1AQ96P16 ANP32BP3-201ENST00000559213 706 ntBASIC1.98□□□□□ -2.09
RPRD1AQ96P16 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
RPRD1AQ96P16 MIR4287-201ENST00000579398 78 ntBASIC1.98□□□□□ -2.09
RPRD1AQ96P16 HMGN1P30-201ENST00000589286 268 ntBASIC1.98□□□□□ -2.09
RPRD1AQ96P16 BNIP3P30-201ENST00000601184 574 ntBASIC1.98□□□□□ -2.09
RPRD1AQ96P16 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.98□□□□□ -2.09
RPRD1AQ96P16 AL158032.1-201ENST00000605401 106 ntBASIC1.98□□□□□ -2.09
RPRD1AQ96P16 AC012409.4-201ENST00000612923 249 ntBASIC1.98□□□□□ -2.09
RPRD1AQ96P16 MIR6715A-201ENST00000615929 79 ntBASIC1.98□□□□□ -2.09
RPRD1AQ96P16 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.98□□□□□ -2.09
RPRD1AQ96P16 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.98□□□□□ -2.09
RPRD1AQ96P16 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
RPRD1AQ96P16 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RPRD1AQ96P16 SNORD114-19-201ENST00000363072 75 ntBASIC1.97□□□□□ -2.09
RPRD1AQ96P16 SNORA25B-201ENST00000365507 128 ntBASIC1.97□□□□□ -2.09
RPRD1AQ96P16 RNU6-72P-201ENST00000384285 79 ntBASIC1.97□□□□□ -2.09
RPRD1AQ96P16 CISD1P1-201ENST00000393907 327 ntBASIC1.97□□□□□ -2.09
RPRD1AQ96P16 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.97□□□□□ -2.09
RPRD1AQ96P16 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.97□□□□□ -2.09
RPRD1AQ96P16 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.97□□□□□ -2.09
RPRD1AQ96P16 AC137499.1-201ENST00000427602 88 ntBASIC1.97□□□□□ -2.09
RPRD1AQ96P16 AL627311.1-201ENST00000431514 115 ntBASIC1.97□□□□□ -2.09
RPRD1AQ96P16 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.97□□□□□ -2.09
RPRD1AQ96P16 MTND5P2-201ENST00000442927 1142 ntBASIC1.97□□□□□ -2.09
RPRD1AQ96P16 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.97□□□□□ -2.09
RPRD1AQ96P16 AC108078.2-201ENST00000510750 236 ntBASIC1.97□□□□□ -2.09
RPRD1AQ96P16 RNU6-123P-201ENST00000516163 102 ntBASIC1.97□□□□□ -2.09
RPRD1AQ96P16 AC107953.1-201ENST00000522216 297 ntBASIC1.97□□□□□ -2.09
RPRD1AQ96P16 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.97□□□□□ -2.09
RPRD1AQ96P16 AC104984.5-201ENST00000586878 94 ntBASIC1.97□□□□□ -2.09
RPRD1AQ96P16 AC234772.3-201ENST00000602277 528 ntBASIC1.97□□□□□ -2.09
RPRD1AQ96P16 AC073410.2-201ENST00000603240 332 ntBASIC1.97□□□□□ -2.09
RPRD1AQ96P16 AC096772.1-201ENST00000609146 564 ntBASIC1.97□□□□□ -2.09
RPRD1AQ96P16 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.97□□□□□ -2.09
RPRD1AQ96P16 AC099654.13-201ENST00000639774 207 ntBASIC1.97□□□□□ -2.09
RPRD1AQ96P16 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RPRD1AQ96P16 RNU6-1159P-201ENST00000362933 107 ntBASIC1.96□□□□□ -2.1
RPRD1AQ96P16 RNU6-843P-201ENST00000384454 104 ntBASIC1.96□□□□□ -2.1
RPRD1AQ96P16 RNU1-57P-201ENST00000384491 166 ntBASIC1.96□□□□□ -2.1
RPRD1AQ96P16 MIR583-201ENST00000384846 75 ntBASIC1.96□□□□□ -2.1
RPRD1AQ96P16 MIR10A-201ENST00000385043 110 ntBASIC1.96□□□□□ -2.1
RPRD1AQ96P16 RNA5SP338-201ENST00000410495 85 ntBASIC1.96□□□□□ -2.1
RPRD1AQ96P16 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.96□□□□□ -2.1
RPRD1AQ96P16 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.96□□□□□ -2.1
RPRD1AQ96P16 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.96□□□□□ -2.1
RPRD1AQ96P16 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.96□□□□□ -2.1
RPRD1AQ96P16 CALM1P1-201ENST00000442082 433 ntBASIC1.96□□□□□ -2.1
RPRD1AQ96P16 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.96□□□□□ -2.1
RPRD1AQ96P16 HMGB1P30-201ENST00000492455 606 ntBASIC1.96□□□□□ -2.1
RPRD1AQ96P16 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.96□□□□□ -2.1
RPRD1AQ96P16 RN7SKP265-201ENST00000516448 223 ntBASIC1.96□□□□□ -2.1
RPRD1AQ96P16 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
RPRD1AQ96P16 ADI1P3-201ENST00000549509 470 ntBASIC1.96□□□□□ -2.1
RPRD1AQ96P16 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.96□□□□□ -2.1
RPRD1AQ96P16 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
RPRD1AQ96P16 RPL30P11-203ENST00000598995 310 ntBASIC1.96□□□□□ -2.1
RPRD1AQ96P16 AL138889.2-201ENST00000603883 242 ntBASIC1.96□□□□□ -2.1
RPRD1AQ96P16 AC021646.1-201ENST00000605469 484 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms