Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC010099.1-201ENST00000455434 375 ntBASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 AMD1P1-201ENST00000457220 922 ntBASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 AC104472.2-201ENST00000469035 601 ntBASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 RPL39P5-202ENST00000512505 151 ntBASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 SNORA31.1-201ENST00000515993 133 ntBASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 SNORA31.5-201ENST00000516190 133 ntBASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 Y_RNA.682-201ENST00000516457 100 ntBASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 Y_RNA.691-201ENST00000516611 103 ntBASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 AC138761.3-201ENST00000579993 334 ntBASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 AC023043.2-201ENST00000589678 1026 ntBASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 AL117336.2-201ENST00000602435 335 ntBASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 AC087045.1-201ENST00000605856 382 ntBASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 uc_338.25-201ENST00000613756 156 ntBASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 AC009233.1-201ENST00000616477 371 ntBASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 AL133216.2-202ENST00000634512 349 ntBASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 MAPK10-362ENST00000641864 4484 ntBASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM43Q96BQ3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 RNU6-562P-201ENST00000362731 107 ntBASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 Y_RNA.212-201ENST00000364177 102 ntBASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 SNAP23P1-201ENST00000433229 246 ntBASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 AC107399.1-201ENST00000451226 265 ntBASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 BTF3P15-201ENST00000455606 336 ntBASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 HMGN2P13-201ENST00000476476 274 ntBASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 RPS27AP10-201ENST00000496103 208 ntBASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 FGF7P4-201ENST00000509595 295 ntBASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 RNU6-566P-201ENST00000516790 107 ntBASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 RNU6-1088P-201ENST00000516850 104 ntBASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 LINC00933-203ENST00000559812 219 ntBASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 CYCSP39-201ENST00000565821 309 ntBASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 MIR4790-201ENST00000577799 79 ntBASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 AL132765.2-201ENST00000610812 351 ntBASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 AL138726.1-201ENST00000614873 333 ntBASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 AC112487.2-201ENST00000637950 304 ntBASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.43□□□□□ -1.86
TRIM43Q96BQ3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 AC103988.1-201ENST00000566382 2177 ntBASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 AC062016.1-201ENST00000355719 319 ntBASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 SNORD116-11-201ENST00000383882 92 ntBASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 RNU6-198P-201ENST00000384258 104 ntBASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 SNORD15B-201ENST00000384714 146 ntBASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 RNA5SP184-201ENST00000411071 108 ntBASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 NUP35P1-201ENST00000422734 947 ntBASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 AC105272.1-201ENST00000438604 198 ntBASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 AL109933.2-201ENST00000452651 260 ntBASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 AC233279.1-201ENST00000455300 423 ntBASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 RPS29P20-201ENST00000489592 171 ntBASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 AC008526.1-201ENST00000509149 338 ntBASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 Y_RNA.675-201ENST00000516389 149 ntBASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 RNA5SP454-201ENST00000517231 127 ntBASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 COPS8P3-201ENST00000526024 482 ntBASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 AC026371.1-201ENST00000551867 419 ntBASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 AC007151.1-201ENST00000572774 483 ntBASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 C8orf59P2-201ENST00000603441 271 ntBASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 SNORA50A-202ENST00000629536 136 ntBASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 MIR1302-1-201ENST00000637932 143 ntBASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 AC017071.1-201ENST00000564407 2204 ntBASIC3.42□□□□□ -1.86
TRIM43Q96BQ3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 RNU6-37P-201ENST00000362692 107 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 RNU4-73P-201ENST00000363164 141 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 Y_RNA.135-201ENST00000363439 95 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 RNU6-11P-201ENST00000364234 107 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 RNU6-25P-201ENST00000383873 107 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 RNU6-1-201ENST00000383898 107 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 RNU6-48P-201ENST00000384161 107 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 RNU6-36P-201ENST00000384172 107 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 RNU6-4P-201ENST00000384205 107 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 RNU6-5P-201ENST00000384238 107 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 RNU6-3P-201ENST00000384314 107 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 RNU6-16P-201ENST00000384385 107 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 RNU6-15P-201ENST00000384534 107 ntBASIC3.41□□□□□ -1.86
TRIM43Q96BQ3 RNU6-2-201ENST00000384627 107 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms