Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RNU6-842P-201ENST00000384269 107 ntBASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 AL354751.2-201ENST00000415471 210 ntBASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 PTGES3P4-201ENST00000426243 356 ntBASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 AC069499.1-201ENST00000489433 509 ntBASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 RNU6-307P-201ENST00000516743 106 ntBASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 GNRHR2P1-201ENST00000555315 631 ntBASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 MTCO3P13-201ENST00000577757 781 ntBASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 AC019159.1-201ENST00000605094 187 ntBASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 AC005046.1-201ENST00000608515 625 ntBASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 AC024581.2-201ENST00000619986 252 ntBASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 AC241585.2-209ENST00000638217 143 ntBASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 AC091152.2-201ENST00000591628 2569 ntBASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 AC010680.1-201ENST00000590024 3590 ntBASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 Y_RNA.445-201ENST00000384168 102 ntBASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 BTF3L4P2-201ENST00000392798 346 ntBASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 AC074117.2-201ENST00000417130 397 ntBASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 AL441985.1-201ENST00000457727 251 ntBASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 RN7SL601P-201ENST00000471221 293 ntBASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 HMGN1P10-201ENST00000474557 553 ntBASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 CPDP1-201ENST00000579660 283 ntBASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 HMGB1P50-201ENST00000605814 607 ntBASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 MIR7851-201ENST00000610611 160 ntBASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 MIR3529-201ENST00000637713 78 ntBASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SYNPOQ8N3V7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 Y_RNA.123-201ENST00000363338 102 ntBASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 RNA5SP50-201ENST00000363731 107 ntBASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 U8.8-201ENST00000365399 135 ntBASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 RNU6-692P-201ENST00000384496 107 ntBASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 MIR544A-201ENST00000384855 91 ntBASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 MIR634-201ENST00000385208 97 ntBASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 RPS29P13-201ENST00000402041 169 ntBASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 NDUFB4P4-201ENST00000404822 243 ntBASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 BX276092.3-201ENST00000424182 230 ntBASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 AC005534.2-201ENST00000431047 433 ntBASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 AL353997.1-201ENST00000432936 108 ntBASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 ELOCP24-201ENST00000456370 334 ntBASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 GZMAP1-201ENST00000503054 631 ntBASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 RNU6-264P-201ENST00000517134 104 ntBASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 CR383656.8-201ENST00000549046 145 ntBASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 AC010653.1-201ENST00000571108 881 ntBASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 AC020914.4-201ENST00000597690 277 ntBASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 MIR8076-201ENST00000611401 83 ntBASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 AL591424.2-201ENST00000617023 128 ntBASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 AC098657.3-201ENST00000620434 263 ntBASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SYNPOQ8N3V7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 RNU6-227P-201ENST00000362865 103 ntBASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 SNORA63-201ENST00000363450 132 ntBASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 RNA5SP322-201ENST00000363617 119 ntBASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 CD24P4-201ENST00000382840 243 ntBASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 MIR1183-201ENST00000408856 89 ntBASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 AC138623.1-201ENST00000418060 216 ntBASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 RN7SL807P-201ENST00000470923 297 ntBASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 AC026784.1-201ENST00000507986 352 ntBASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 Y_RNA.661-201ENST00000516003 99 ntBASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 AC005899.2-201ENST00000584353 90 ntBASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 AC022432.1-201ENST00000595739 310 ntBASIC3.8□□□□□ -1.8
SYNPOQ8N3V7 AC244505.7-201ENST00000599675 272 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms