Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 RPL23AP45-201ENST00000476406 468 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 AC027575.1-201ENST00000481064 460 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 GZMAP1-201ENST00000503054 631 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.38□□□□□ -1.87
KRT78Q8N1N4 AC026784.1-201ENST00000507986 352 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 AC104619.4-201ENST00000510773 249 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 SNORA70.19-201ENST00000516717 90 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 ACA59.2-201ENST00000517061 156 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 AP006245.1-201ENST00000522549 120 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 AC026333.2-201ENST00000542164 106 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.38□□□□□ -1.87
KRT78Q8N1N4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.38□□□□□ -1.87
KRT78Q8N1N4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.38□□□□□ -1.87
KRT78Q8N1N4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.38□□□□□ -1.87
KRT78Q8N1N4 MIR4742-201ENST00000581069 85 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 AL133393.1-201ENST00000603277 287 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 AL022345.1-201ENST00000607292 135 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 AC090425.1-201ENST00000610007 140 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 AC022149.2-201ENST00000621061 203 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 7SK.10-201ENST00000621414 298 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 U4.6-201ENST00000621618 127 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.38□□□□□ -1.87
KRT78Q8N1N4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.38□□□□□ -1.87
KRT78Q8N1N4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.38□□□□□ -1.87
KRT78Q8N1N4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRT78Q8N1N4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
KRT78Q8N1N4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
KRT78Q8N1N4 Y_RNA.126-201ENST00000363382 111 ntBASIC3.37□□□□□ -1.87
KRT78Q8N1N4 RNU6-527P-201ENST00000363425 104 ntBASIC3.37□□□□□ -1.87
KRT78Q8N1N4 SNORA48.8-201ENST00000391324 134 ntBASIC3.37□□□□□ -1.87
KRT78Q8N1N4 SAR1AP2-201ENST00000392696 594 ntBASIC3.37□□□□□ -1.87
KRT78Q8N1N4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRT78Q8N1N4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.37□□□□□ -1.87
KRT78Q8N1N4 AC245054.2-201ENST00000415639 319 ntBASIC3.37□□□□□ -1.87
KRT78Q8N1N4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.37□□□□□ -1.87
KRT78Q8N1N4 Z82205.1-201ENST00000428456 297 ntBASIC3.37□□□□□ -1.87
KRT78Q8N1N4 CYCSP4-201ENST00000429682 331 ntBASIC3.37□□□□□ -1.87
KRT78Q8N1N4 Y_RNA.631-201ENST00000459607 101 ntBASIC3.37□□□□□ -1.87
KRT78Q8N1N4 RPL23AP67-201ENST00000465341 474 ntBASIC3.37□□□□□ -1.87
KRT78Q8N1N4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.37□□□□□ -1.87
KRT78Q8N1N4 AL163540.1-201ENST00000485382 386 ntBASIC3.37□□□□□ -1.87
KRT78Q8N1N4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.37□□□□□ -1.87
KRT78Q8N1N4 MRPL42P6-201ENST00000486397 371 ntBASIC3.37□□□□□ -1.87
KRT78Q8N1N4 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.37□□□□□ -1.87
KRT78Q8N1N4 AC002456.2-201ENST00000509356 380 ntBASIC3.37□□□□□ -1.87
KRT78Q8N1N4 PHBP14-201ENST00000512887 367 ntBASIC3.37□□□□□ -1.87
KRT78Q8N1N4 AC010265.1-201ENST00000513509 211 ntBASIC3.37□□□□□ -1.87
KRT78Q8N1N4 RNU5F-8P-201ENST00000515941 111 ntBASIC3.37□□□□□ -1.87
KRT78Q8N1N4 RNU6-1170P-201ENST00000515974 106 ntBASIC3.37□□□□□ -1.87
KRT78Q8N1N4 AC026464.5-201ENST00000562497 722 ntBASIC3.37□□□□□ -1.87
KRT78Q8N1N4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.37□□□□□ -1.87
KRT78Q8N1N4 AC016925.2-201ENST00000605108 242 ntBASIC3.37□□□□□ -1.87
KRT78Q8N1N4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.37□□□□□ -1.87
KRT78Q8N1N4 AC007792.1-201ENST00000623023 402 ntBASIC3.37□□□□□ -1.87
KRT78Q8N1N4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.37□□□□□ -1.87
KRT78Q8N1N4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
KRT78Q8N1N4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.37□□□□□ -1.87
KRT78Q8N1N4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.37□□□□□ -1.87
KRT78Q8N1N4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KRT78Q8N1N4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.37□□□□□ -1.87
KRT78Q8N1N4 RNU6-78P-201ENST00000362897 107 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 Y_RNA.133-201ENST00000363428 110 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 SNORD116-20-201ENST00000384529 92 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 AL445529.1-201ENST00000398713 389 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 AL356057.3-201ENST00000402607 340 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 FTH1P15-201ENST00000406984 280 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 Y_RNA.605-201ENST00000410577 105 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 SNORD56-201ENST00000413522 71 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 AL358075.3-201ENST00000426289 226 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 AC009414.1-201ENST00000427200 443 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.36□□□□□ -1.87
KRT78Q8N1N4 Y_RNA.639-201ENST00000458981 102 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 RNU7-66P-201ENST00000459469 62 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 RNU6-329P-201ENST00000459618 107 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 AC090096.1-201ENST00000489168 390 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.36□□□□□ -1.87
KRT78Q8N1N4 RNU6-864P-201ENST00000516256 108 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 Y_RNA.691-201ENST00000516611 103 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 SNORA43.2-201ENST00000516652 128 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 SNORA70.18-201ENST00000516696 98 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 Y_RNA.711-201ENST00000516993 102 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 AC023632.4-201ENST00000517783 191 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 AP000889.2-201ENST00000532684 490 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.36□□□□□ -1.87
KRT78Q8N1N4 AC026371.1-201ENST00000551867 419 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.36□□□□□ -1.87
KRT78Q8N1N4 TGIF1P1-201ENST00000558095 802 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 AC100830.2-201ENST00000581636 240 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 AC006130.2-201ENST00000586202 326 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.36□□□□□ -1.87
KRT78Q8N1N4 AC006557.5-201ENST00000603126 811 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 AC021646.1-201ENST00000605469 484 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.36□□□□□ -1.87
KRT78Q8N1N4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.36□□□□□ -1.87
KRT78Q8N1N4 MIR6798-201ENST00000612887 67 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 AL133216.2-202ENST00000634512 349 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 AL034408.1-202ENST00000636088 415 ntBASIC3.36□□□□□ -1.87
KRT78Q8N1N4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRT78Q8N1N4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KRT78Q8N1N4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms