Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.73□□□□□ -1.97
NPHP3Q7Z494 AC073343.1-201ENST00000328239 651 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 RNY1P10-201ENST00000363268 113 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 Y_RNA.796-201ENST00000364268 102 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 Y_RNA.799-201ENST00000364992 102 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 RNA5SP190-201ENST00000365222 118 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 RNU6-641P-201ENST00000384006 107 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 AL356057.2-201ENST00000403318 432 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 RNU2-39P-201ENST00000410604 198 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 RNU2-66P-201ENST00000410650 161 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 BX682237.1-201ENST00000415016 335 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
NPHP3Q7Z494 HMGB1P27-201ENST00000431429 603 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 RPS15AP7-201ENST00000439294 405 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.73□□□□□ -1.97
NPHP3Q7Z494 MTCO2P7-201ENST00000446518 666 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.73□□□□□ -1.97
NPHP3Q7Z494 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.73□□□□□ -1.97
NPHP3Q7Z494 C1DP4-201ENST00000455429 424 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.73□□□□□ -1.97
NPHP3Q7Z494 RPS15AP34-201ENST00000487776 387 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 AC007182.2-201ENST00000489251 402 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.73□□□□□ -1.97
NPHP3Q7Z494 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 SNORA31.11-201ENST00000516528 139 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 RNA5SP165-201ENST00000517142 115 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 RN7SKP40-201ENST00000517211 242 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.73□□□□□ -1.97
NPHP3Q7Z494 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.73□□□□□ -1.97
NPHP3Q7Z494 HSPE1P20-201ENST00000538133 289 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.73□□□□□ -1.97
NPHP3Q7Z494 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.73□□□□□ -1.97
NPHP3Q7Z494 AL391840.1-201ENST00000571144 367 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 AC091805.2-201ENST00000603848 235 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 Z84480.1-201ENST00000605131 311 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 AL365204.3-201ENST00000612448 685 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 AC005332.10-201ENST00000612725 619 ntBASIC2.73□□□□□ -1.97
NPHP3Q7Z494 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.73□□□□□ -1.97
NPHP3Q7Z494 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NPHP3Q7Z494 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
NPHP3Q7Z494 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
NPHP3Q7Z494 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
NPHP3Q7Z494 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NPHP3Q7Z494 MIR499A-201ENST00000384903 122 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 MIR1-2-201ENST00000384961 85 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 RPL19P1-201ENST00000411635 428 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 RPS12P24-201ENST00000412619 387 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 BTF3P4-201ENST00000418852 495 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 AL445685.2-201ENST00000422551 342 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 MED13P1-201ENST00000428342 171 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 AC133104.1-201ENST00000429100 218 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.72□□□□□ -1.97
NPHP3Q7Z494 MTATP6P16-201ENST00000434543 526 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 RPS15AP9-201ENST00000439856 381 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 AC093899.1-201ENST00000457984 376 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 SNORD13-201ENST00000459299 104 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 RPS27AP10-201ENST00000496103 208 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.72□□□□□ -1.97
NPHP3Q7Z494 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.72□□□□□ -1.97
NPHP3Q7Z494 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 Y_RNA.689-201ENST00000516589 107 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.72□□□□□ -1.97
NPHP3Q7Z494 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.72□□□□□ -1.97
NPHP3Q7Z494 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 COX6CP5-201ENST00000527162 228 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.72□□□□□ -1.97
NPHP3Q7Z494 AC024619.4-201ENST00000580924 316 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 AC098848.2-201ENST00000588023 330 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 AL670379.10-201ENST00000604330 253 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 AL670379.2-201ENST00000604983 252 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 AL670379.4-201ENST00000605279 254 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 AL670379.9-201ENST00000605428 253 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.72□□□□□ -1.97
NPHP3Q7Z494 AC104073.3-201ENST00000610942 955 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 AC011939.3-201ENST00000613686 466 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 AC136475.10-201ENST00000620253 385 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 AC244517.12-201ENST00000623581 663 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.72□□□□□ -1.97
NPHP3Q7Z494 MIR7515-201ENST00000637837 67 ntBASIC2.72□□□□□ -1.97
NPHP3Q7Z494 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.72□□□□□ -1.97
NPHP3Q7Z494 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.72□□□□□ -1.97
NPHP3Q7Z494 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
NPHP3Q7Z494 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.72□□□□□ -1.97
NPHP3Q7Z494 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.97
NPHP3Q7Z494 SNORA24.1-201ENST00000384401 135 ntBASIC2.71□□□□□ -1.98
NPHP3Q7Z494 RNU6-456P-201ENST00000384493 107 ntBASIC2.71□□□□□ -1.98
NPHP3Q7Z494 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.71□□□□□ -1.98
NPHP3Q7Z494 RNU2-68P-201ENST00000410878 191 ntBASIC2.71□□□□□ -1.98
NPHP3Q7Z494 RNA5SP492-201ENST00000411330 114 ntBASIC2.71□□□□□ -1.98
NPHP3Q7Z494 RNA5SP270-201ENST00000411361 118 ntBASIC2.71□□□□□ -1.98
NPHP3Q7Z494 BPY2DP-201ENST00000422208 265 ntBASIC2.71□□□□□ -1.98
NPHP3Q7Z494 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.71□□□□□ -1.98
NPHP3Q7Z494 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.71□□□□□ -1.98
NPHP3Q7Z494 MTCO2P11-201ENST00000431069 680 ntBASIC2.71□□□□□ -1.98
NPHP3Q7Z494 GPM6BP2-201ENST00000432046 144 ntBASIC2.71□□□□□ -1.98
NPHP3Q7Z494 GPM6BP1-201ENST00000446387 144 ntBASIC2.71□□□□□ -1.98
NPHP3Q7Z494 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.71□□□□□ -1.98
NPHP3Q7Z494 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.71□□□□□ -1.98
NPHP3Q7Z494 AC104564.1-201ENST00000493028 407 ntBASIC2.71□□□□□ -1.98
NPHP3Q7Z494 AC108078.2-201ENST00000510750 236 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms