Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NIPAL3Q6P499 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
NIPAL3Q6P499 FGF7P2-201ENST00000332473 296 ntBASIC2.07□□□□□ -2.08
NIPAL3Q6P499 OR5H15-201ENST00000383696 930 ntBASIC2.07□□□□□ -2.08
NIPAL3Q6P499 RNU6-116P-201ENST00000384042 109 ntBASIC2.07□□□□□ -2.08
NIPAL3Q6P499 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.07□□□□□ -2.08
NIPAL3Q6P499 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.07□□□□□ -2.08
NIPAL3Q6P499 AIMP1P2-201ENST00000425294 312 ntBASIC2.07□□□□□ -2.08
NIPAL3Q6P499 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.07□□□□□ -2.08
NIPAL3Q6P499 MTCO3P5-201ENST00000433620 714 ntBASIC2.07□□□□□ -2.08
NIPAL3Q6P499 GPR143P-201ENST00000434155 205 ntBASIC2.07□□□□□ -2.08
NIPAL3Q6P499 RPS15AP28-201ENST00000435088 386 ntBASIC2.07□□□□□ -2.08
NIPAL3Q6P499 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.07□□□□□ -2.08
NIPAL3Q6P499 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.07□□□□□ -2.08
NIPAL3Q6P499 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.07□□□□□ -2.08
NIPAL3Q6P499 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.07□□□□□ -2.08
NIPAL3Q6P499 RNU2-53P-201ENST00000516257 147 ntBASIC2.07□□□□□ -2.08
NIPAL3Q6P499 RNA5SP82-201ENST00000516707 92 ntBASIC2.07□□□□□ -2.08
NIPAL3Q6P499 AC109329.1-201ENST00000518744 317 ntBASIC2.07□□□□□ -2.08
NIPAL3Q6P499 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.07□□□□□ -2.08
NIPAL3Q6P499 AC060788.1-201ENST00000521318 469 ntBASIC2.07□□□□□ -2.08
NIPAL3Q6P499 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.07□□□□□ -2.08
NIPAL3Q6P499 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.07□□□□□ -2.08
NIPAL3Q6P499 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.07□□□□□ -2.08
NIPAL3Q6P499 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.07□□□□□ -2.08
NIPAL3Q6P499 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NIPAL3Q6P499 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.07□□□□□ -2.08
NIPAL3Q6P499 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.07□□□□□ -2.08
NIPAL3Q6P499 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NIPAL3Q6P499 AP006437.1-201ENST00000641440 3685 ntBASIC2.07□□□□□ -2.08
NIPAL3Q6P499 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NIPAL3Q6P499 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
NIPAL3Q6P499 RNA5SP289-201ENST00000362332 137 ntBASIC2.06□□□□□ -2.08
NIPAL3Q6P499 RNU4-82P-201ENST00000362443 140 ntBASIC2.06□□□□□ -2.08
NIPAL3Q6P499 SNORD115-7-201ENST00000365306 82 ntBASIC2.06□□□□□ -2.08
NIPAL3Q6P499 Y_RNA.367-201ENST00000365544 101 ntBASIC2.06□□□□□ -2.08
NIPAL3Q6P499 RNU6-1032P-201ENST00000384100 107 ntBASIC2.06□□□□□ -2.08
NIPAL3Q6P499 Y_RNA.500-201ENST00000384466 111 ntBASIC2.06□□□□□ -2.08
NIPAL3Q6P499 MIR186-201ENST00000384988 86 ntBASIC2.06□□□□□ -2.08
NIPAL3Q6P499 RAP1BP3-201ENST00000407180 549 ntBASIC2.06□□□□□ -2.08
NIPAL3Q6P499 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.06□□□□□ -2.08
NIPAL3Q6P499 OR6C66P-201ENST00000414917 930 ntBASIC2.06□□□□□ -2.08
NIPAL3Q6P499 EDDM3CP-201ENST00000415977 425 ntBASIC2.06□□□□□ -2.08
NIPAL3Q6P499 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.06□□□□□ -2.08
NIPAL3Q6P499 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.06□□□□□ -2.08
NIPAL3Q6P499 AC008267.5-201ENST00000424928 265 ntBASIC2.06□□□□□ -2.08
NIPAL3Q6P499 RPL31P35-201ENST00000431058 377 ntBASIC2.06□□□□□ -2.08
NIPAL3Q6P499 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.06□□□□□ -2.08
NIPAL3Q6P499 RPS6P15-201ENST00000431996 751 ntBASIC2.06□□□□□ -2.08
NIPAL3Q6P499 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.06□□□□□ -2.08
NIPAL3Q6P499 AL022238.1-201ENST00000442557 355 ntBASIC2.06□□□□□ -2.08
NIPAL3Q6P499 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.06□□□□□ -2.08
NIPAL3Q6P499 RNA5SP269-201ENST00000459032 137 ntBASIC2.06□□□□□ -2.08
NIPAL3Q6P499 SNORD42A-201ENST00000459584 64 ntBASIC2.06□□□□□ -2.08
NIPAL3Q6P499 AC091965.2-201ENST00000512324 613 ntBASIC2.06□□□□□ -2.08
NIPAL3Q6P499 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.06□□□□□ -2.08
NIPAL3Q6P499 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.06□□□□□ -2.08
NIPAL3Q6P499 AP002453.2-201ENST00000533503 320 ntBASIC2.06□□□□□ -2.08
NIPAL3Q6P499 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.06□□□□□ -2.08
NIPAL3Q6P499 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.06□□□□□ -2.08
NIPAL3Q6P499 NDUFA8P1-201ENST00000605525 367 ntBASIC2.06□□□□□ -2.08
NIPAL3Q6P499 AC026585.1-201ENST00000619582 524 ntBASIC2.06□□□□□ -2.08
NIPAL3Q6P499 MIR6766-201ENST00000622641 72 ntBASIC2.06□□□□□ -2.08
NIPAL3Q6P499 AP000770.2-201ENST00000623694 100 ntBASIC2.06□□□□□ -2.08
NIPAL3Q6P499 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.06□□□□□ -2.08
NIPAL3Q6P499 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
NIPAL3Q6P499 MIR449A-201ENST00000362113 91 ntBASIC2.05□□□□□ -2.08
NIPAL3Q6P499 RNU6-1287P-201ENST00000362914 107 ntBASIC2.05□□□□□ -2.08
NIPAL3Q6P499 RNU6-622P-201ENST00000384272 103 ntBASIC2.05□□□□□ -2.08
NIPAL3Q6P499 RNU6-1060P-201ENST00000384664 107 ntBASIC2.05□□□□□ -2.08
NIPAL3Q6P499 AL591416.1-201ENST00000404015 867 ntBASIC2.05□□□□□ -2.08
NIPAL3Q6P499 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.05□□□□□ -2.08
NIPAL3Q6P499 AC107081.1-201ENST00000414975 361 ntBASIC2.05□□□□□ -2.08
NIPAL3Q6P499 USP9YP27-201ENST00000418455 438 ntBASIC2.05□□□□□ -2.08
NIPAL3Q6P499 MTND2P18-201ENST00000419962 1030 ntBASIC2.05□□□□□ -2.08
NIPAL3Q6P499 AC000111.3-201ENST00000433478 193 ntBASIC2.05□□□□□ -2.08
NIPAL3Q6P499 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.05□□□□□ -2.08
NIPAL3Q6P499 HMGB1P31-201ENST00000437242 427 ntBASIC2.05□□□□□ -2.08
NIPAL3Q6P499 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.05□□□□□ -2.08
NIPAL3Q6P499 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.05□□□□□ -2.08
NIPAL3Q6P499 AC104435.1-201ENST00000483483 166 ntBASIC2.05□□□□□ -2.08
NIPAL3Q6P499 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.05□□□□□ -2.08
NIPAL3Q6P499 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.05□□□□□ -2.08
NIPAL3Q6P499 SNORA4.4-201ENST00000515921 135 ntBASIC2.05□□□□□ -2.08
NIPAL3Q6P499 RNU1-86P-201ENST00000516108 154 ntBASIC2.05□□□□□ -2.08
NIPAL3Q6P499 RNA5SP281-201ENST00000516504 135 ntBASIC2.05□□□□□ -2.08
NIPAL3Q6P499 RNU1-107P-201ENST00000516617 154 ntBASIC2.05□□□□□ -2.08
NIPAL3Q6P499 SNORA43.2-201ENST00000516652 128 ntBASIC2.05□□□□□ -2.08
NIPAL3Q6P499 SNORA18.6-201ENST00000516792 115 ntBASIC2.05□□□□□ -2.08
NIPAL3Q6P499 RNU6-586P-201ENST00000517265 104 ntBASIC2.05□□□□□ -2.08
NIPAL3Q6P499 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.05□□□□□ -2.08
NIPAL3Q6P499 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.05□□□□□ -2.08
NIPAL3Q6P499 AC093249.1-201ENST00000567049 203 ntBASIC2.05□□□□□ -2.08
NIPAL3Q6P499 MIR5007-201ENST00000583098 95 ntBASIC2.05□□□□□ -2.08
NIPAL3Q6P499 AC098614.4-201ENST00000607601 462 ntBASIC2.05□□□□□ -2.08
NIPAL3Q6P499 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
NIPAL3Q6P499 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NIPAL3Q6P499 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NIPAL3Q6P499 RNU6-1097P-201ENST00000363586 107 ntBASIC2.04□□□□□ -2.08
NIPAL3Q6P499 SNORA62.1-201ENST00000364287 154 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms