Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AL731566.2-201ENST00000618971 317 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 AC024581.2-201ENST00000619986 252 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 AC090617.7-201ENST00000623952 126 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 AC068724.3-201ENST00000625906 87 ntBASIC3.29□□□□□ -1.88
RNF220Q5VTB9 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.29□□□□□ -1.88
RNF220Q5VTB9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.29□□□□□ -1.88
RNF220Q5VTB9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.29□□□□□ -1.88
RNF220Q5VTB9 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
RNF220Q5VTB9 RBBP8P1-201ENST00000449447 1844 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF220Q5VTB9 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RNF220Q5VTB9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.28□□□□□ -1.88
RNF220Q5VTB9 RNU6-933P-201ENST00000384424 107 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 U8.11-201ENST00000384699 133 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 U8.12-201ENST00000384701 133 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 SNORA48.8-201ENST00000391324 134 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF220Q5VTB9 RNU6-325P-201ENST00000411132 105 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 ATP5A1P2-201ENST00000412323 255 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 TRIAP1P1-201ENST00000427062 225 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 RPL7P2-201ENST00000427639 268 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 HMGN2P31-201ENST00000432430 273 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 RPS3AP52-201ENST00000435639 297 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 FABP5P14-201ENST00000437273 393 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF220Q5VTB9 AL357552.1-201ENST00000445254 415 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.28□□□□□ -1.88
RNF220Q5VTB9 U8.18-201ENST00000459285 133 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 U8.21-201ENST00000459536 136 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 RN7SL75P-201ENST00000461926 281 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 MRPS36P2-201ENST00000512569 299 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.28□□□□□ -1.88
RNF220Q5VTB9 RNU1-143P-201ENST00000516296 146 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 RNU1-54P-201ENST00000517181 120 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.28□□□□□ -1.88
RNF220Q5VTB9 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.28□□□□□ -1.88
RNF220Q5VTB9 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.28□□□□□ -1.88
RNF220Q5VTB9 RAB11AP2-201ENST00000545905 639 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.28□□□□□ -1.88
RNF220Q5VTB9 U1.23-201ENST00000610293 146 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 RNU1-68P-201ENST00000615382 146 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 MIR6128-201ENST00000615528 109 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 AC104985.2-201ENST00000620598 500 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 U1.39-201ENST00000621562 146 ntBASIC3.28□□□□□ -1.88
RNF220Q5VTB9 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
RNF220Q5VTB9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF220Q5VTB9 Y_RNA.151-201ENST00000363566 112 ntBASIC3.27□□□□□ -1.89
RNF220Q5VTB9 RNA5SP390-201ENST00000410191 113 ntBASIC3.27□□□□□ -1.89
RNF220Q5VTB9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.27□□□□□ -1.89
RNF220Q5VTB9 AC092017.2-201ENST00000427600 362 ntBASIC3.27□□□□□ -1.89
RNF220Q5VTB9 AC091286.1-201ENST00000431233 461 ntBASIC3.27□□□□□ -1.89
RNF220Q5VTB9 PCMTD1P1-201ENST00000455560 355 ntBASIC3.27□□□□□ -1.89
RNF220Q5VTB9 Y_RNA.635-201ENST00000459041 101 ntBASIC3.27□□□□□ -1.89
RNF220Q5VTB9 CENPBD1P1-201ENST00000464061 469 ntBASIC3.27□□□□□ -1.89
RNF220Q5VTB9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.27□□□□□ -1.89
RNF220Q5VTB9 AC097462.2-201ENST00000504623 481 ntBASIC3.27□□□□□ -1.89
RNF220Q5VTB9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.27□□□□□ -1.89
RNF220Q5VTB9 SNORA31.18-201ENST00000517043 134 ntBASIC3.27□□□□□ -1.89
RNF220Q5VTB9 AC011471.1-201ENST00000585766 187 ntBASIC3.27□□□□□ -1.89
RNF220Q5VTB9 AC113139.1-201ENST00000605049 239 ntBASIC3.27□□□□□ -1.89
RNF220Q5VTB9 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RNF220Q5VTB9 AC019193.3-201ENST00000609144 554 ntBASIC3.27□□□□□ -1.89
RNF220Q5VTB9 AC096772.1-201ENST00000609146 564 ntBASIC3.27□□□□□ -1.89
RNF220Q5VTB9 AL161423.1-201ENST00000613700 262 ntBASIC3.27□□□□□ -1.89
RNF220Q5VTB9 AC097372.5-201ENST00000623665 376 ntBASIC3.27□□□□□ -1.89
RNF220Q5VTB9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
RNF220Q5VTB9 MTND5P19-201ENST00000424872 1794 ntBASIC3.27□□□□□ -1.89
RNF220Q5VTB9 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RNF220Q5VTB9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF220Q5VTB9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF220Q5VTB9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
RNF220Q5VTB9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF220Q5VTB9 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF220Q5VTB9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
RNF220Q5VTB9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
RNF220Q5VTB9 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RNF220Q5VTB9 RNU6-1317P-201ENST00000364582 104 ntBASIC3.26□□□□□ -1.89
RNF220Q5VTB9 RNU6-593P-201ENST00000364716 112 ntBASIC3.26□□□□□ -1.89
RNF220Q5VTB9 Y_RNA.474-201ENST00000384341 102 ntBASIC3.26□□□□□ -1.89
RNF220Q5VTB9 U3.26-201ENST00000391236 204 ntBASIC3.26□□□□□ -1.89
RNF220Q5VTB9 AL512633.1-201ENST00000399931 655 ntBASIC3.26□□□□□ -1.89
RNF220Q5VTB9 AC243964.1-201ENST00000441814 261 ntBASIC3.26□□□□□ -1.89
RNF220Q5VTB9 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.26□□□□□ -1.89
RNF220Q5VTB9 AC103987.1-201ENST00000473394 348 ntBASIC3.26□□□□□ -1.89
RNF220Q5VTB9 AP001025.1-201ENST00000486139 332 ntBASIC3.26□□□□□ -1.89
RNF220Q5VTB9 AC114801.2-201ENST00000503825 781 ntBASIC3.26□□□□□ -1.89
RNF220Q5VTB9 AC116337.1-201ENST00000509680 687 ntBASIC3.26□□□□□ -1.89
RNF220Q5VTB9 SMURF2P1-201ENST00000514992 481 ntBASIC3.26□□□□□ -1.89
RNF220Q5VTB9 SCARNA20.6-201ENST00000517251 106 ntBASIC3.26□□□□□ -1.89
RNF220Q5VTB9 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.26□□□□□ -1.89
RNF220Q5VTB9 IMMP1LP2-201ENST00000552954 492 ntBASIC3.26□□□□□ -1.89
RNF220Q5VTB9 CPDP1-201ENST00000579660 283 ntBASIC3.26□□□□□ -1.89
RNF220Q5VTB9 POLR3GP2-201ENST00000588366 668 ntBASIC3.26□□□□□ -1.89
RNF220Q5VTB9 AL117336.2-201ENST00000602435 335 ntBASIC3.26□□□□□ -1.89
RNF220Q5VTB9 AC124303.1-201ENST00000605703 360 ntBASIC3.26□□□□□ -1.89
RNF220Q5VTB9 AL133215.3-201ENST00000609801 448 ntBASIC3.26□□□□□ -1.89
RNF220Q5VTB9 MIR6810-201ENST00000622701 70 ntBASIC3.26□□□□□ -1.89
RNF220Q5VTB9 MIR1302-1-201ENST00000637932 143 ntBASIC3.26□□□□□ -1.89
RNF220Q5VTB9 AC112487.2-201ENST00000637950 304 ntBASIC3.26□□□□□ -1.89
RNF220Q5VTB9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms