Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.03□□□□□ -1.76
SSRP1Q08945 RNU6-470P-201ENST00000515954 104 ntBASIC4.03□□□□□ -1.76
SSRP1Q08945 SNORA43.2-201ENST00000516652 128 ntBASIC4.03□□□□□ -1.76
SSRP1Q08945 AC010186.2-204ENST00000537668 439 ntBASIC4.03□□□□□ -1.76
SSRP1Q08945 AC006504.6-201ENST00000590142 199 ntBASIC4.03□□□□□ -1.76
SSRP1Q08945 AL451007.1-201ENST00000595491 289 ntBASIC4.03□□□□□ -1.76
SSRP1Q08945 AC024153.1-201ENST00000603103 365 ntBASIC4.03□□□□□ -1.76
SSRP1Q08945 SRGNP1-201ENST00000603392 451 ntBASIC4.03□□□□□ -1.76
SSRP1Q08945 AC012531.5-201ENST00000611375 151 ntBASIC4.03□□□□□ -1.76
SSRP1Q08945 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.03□□□□□ -1.76
SSRP1Q08945 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.03□□□□□ -1.76
SSRP1Q08945 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSRP1Q08945 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.03□□□□□ -1.76
SSRP1Q08945 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SSRP1Q08945 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSRP1Q08945 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.77
SSRP1Q08945 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
SSRP1Q08945 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SSRP1Q08945 MTND5P30-201ENST00000452896 1731 ntBASIC4.02□□□□□ -1.77
SSRP1Q08945 RNU6-336P-201ENST00000364891 107 ntBASIC4.02□□□□□ -1.77
SSRP1Q08945 SNORA33.2-201ENST00000365413 134 ntBASIC4.02□□□□□ -1.77
SSRP1Q08945 SNORA22B-201ENST00000383876 138 ntBASIC4.02□□□□□ -1.77
SSRP1Q08945 Y_RNA.463-201ENST00000384271 102 ntBASIC4.02□□□□□ -1.77
SSRP1Q08945 RNU6-308P-201ENST00000390957 107 ntBASIC4.02□□□□□ -1.77
SSRP1Q08945 RPS29P13-201ENST00000402041 169 ntBASIC4.02□□□□□ -1.77
SSRP1Q08945 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.02□□□□□ -1.77
SSRP1Q08945 BPY2DP-201ENST00000422208 265 ntBASIC4.02□□□□□ -1.77
SSRP1Q08945 AL035666.1-201ENST00000446195 348 ntBASIC4.02□□□□□ -1.77
SSRP1Q08945 MTND4P19-201ENST00000446659 478 ntBASIC4.02□□□□□ -1.77
SSRP1Q08945 AL358232.1-201ENST00000448030 501 ntBASIC4.02□□□□□ -1.77
SSRP1Q08945 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.02□□□□□ -1.77
SSRP1Q08945 AC026403.1-201ENST00000518938 295 ntBASIC4.02□□□□□ -1.77
SSRP1Q08945 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.02□□□□□ -1.77
SSRP1Q08945 MIR4273-201ENST00000582824 84 ntBASIC4.02□□□□□ -1.77
SSRP1Q08945 AC040896.1-201ENST00000613819 479 ntBASIC4.02□□□□□ -1.77
SSRP1Q08945 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.02□□□□□ -1.77
SSRP1Q08945 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SSRP1Q08945 AC110491.1-201ENST00000562191 2010 ntBASIC4.02□□□□□ -1.77
SSRP1Q08945 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSRP1Q08945 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.01□□□□□ -1.77
SSRP1Q08945 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.01□□□□□ -1.77
SSRP1Q08945 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
SSRP1Q08945 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.01□□□□□ -1.77
SSRP1Q08945 CDC27P3-201ENST00000635418 1910 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SSRP1Q08945 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSRP1Q08945 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.01□□□□□ -1.77
SSRP1Q08945 Y_RNA.5-201ENST00000362334 102 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 Y_RNA.28-201ENST00000362554 111 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 RNU6-490P-201ENST00000362985 107 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 RNU6-942P-201ENST00000363002 107 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 MIR521-1-201ENST00000384902 87 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 RNU6-55P-201ENST00000411092 107 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 RHEBP3-201ENST00000411920 351 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.01□□□□□ -1.77
SSRP1Q08945 AC011816.1-201ENST00000441346 546 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 RPL21P23-201ENST00000446654 460 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 AC125238.1-201ENST00000448842 249 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 snoU13.22-201ENST00000459428 104 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 RPL23AP14-201ENST00000468281 468 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 AC025518.1-201ENST00000479856 347 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 AC022493.2-201ENST00000506122 481 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 RNU6-612P-201ENST00000516909 102 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 RNU6-264P-201ENST00000517134 104 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 RNU6-988P-201ENST00000519081 107 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 AP005902.1-201ENST00000521358 186 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 TGIF1P1-201ENST00000558095 802 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.01□□□□□ -1.77
SSRP1Q08945 AC016925.2-201ENST00000605108 242 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 MIR8076-201ENST00000611401 83 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 PWAR6-201ENST00000552334 4618 ntBASIC4.01□□□□□ -1.77
SSRP1Q08945 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSRP1Q08945 AC032011.1-201ENST00000611703 1549 ntBASIC4□□□□□ -1.77
SSRP1Q08945 AL513302.2-201ENST00000562313 1842 ntBASIC4□□□□□ -1.77
SSRP1Q08945 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4□□□□□ -1.77
SSRP1Q08945 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
SSRP1Q08945 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4□□□□□ -1.77
SSRP1Q08945 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
SSRP1Q08945 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4□□□□□ -1.77
SSRP1Q08945 RNA5SP295-201ENST00000362655 121 ntBASIC4□□□□□ -1.77
SSRP1Q08945 RNU6-105P-201ENST00000363909 104 ntBASIC4□□□□□ -1.77
SSRP1Q08945 RNU1-100P-201ENST00000365255 165 ntBASIC4□□□□□ -1.77
SSRP1Q08945 MIR218-2-201ENST00000385006 110 ntBASIC4□□□□□ -1.77
SSRP1Q08945 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4□□□□□ -1.77
SSRP1Q08945 AL591034.2-201ENST00000402839 359 ntBASIC4□□□□□ -1.77
SSRP1Q08945 RNA5SP38-201ENST00000410750 119 ntBASIC4□□□□□ -1.77
SSRP1Q08945 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4□□□□□ -1.77
SSRP1Q08945 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4□□□□□ -1.77
SSRP1Q08945 AC243428.1-201ENST00000421099 264 ntBASIC4□□□□□ -1.77
SSRP1Q08945 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4□□□□□ -1.77
SSRP1Q08945 AC018865.2-201ENST00000423631 129 ntBASIC4□□□□□ -1.77
SSRP1Q08945 BX276092.3-201ENST00000424182 230 ntBASIC4□□□□□ -1.77
SSRP1Q08945 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4□□□□□ -1.77
SSRP1Q08945 AC124916.1-201ENST00000444020 547 ntBASIC4□□□□□ -1.77
SSRP1Q08945 HMGN2P10-201ENST00000448085 265 ntBASIC4□□□□□ -1.77
SSRP1Q08945 AC010099.1-201ENST00000455434 375 ntBASIC4□□□□□ -1.77
SSRP1Q08945 CEACAMP4-201ENST00000457676 421 ntBASIC4□□□□□ -1.77
SSRP1Q08945 HMGN2P13-201ENST00000476476 274 ntBASIC4□□□□□ -1.77
SSRP1Q08945 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4□□□□□ -1.77
SSRP1Q08945 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 344.5 ms