Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
ABCA4P78363 RNA5SP331-201ENST00000364986 107 ntBASIC0.67□□□□□ -2.3
ABCA4P78363 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
ABCA4P78363 AC118469.1-201ENST00000442943 488 ntBASIC0.67□□□□□ -2.3
ABCA4P78363 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.67□□□□□ -2.3
ABCA4P78363 OR2A41P-201ENST00000473586 105 ntBASIC0.67□□□□□ -2.3
ABCA4P78363 AC110760.3-202ENST00000515177 371 ntBASIC0.67□□□□□ -2.3
ABCA4P78363 AC133794.1-201ENST00000602731 914 ntBASIC0.67□□□□□ -2.3
ABCA4P78363 RMST_10.1-201ENST00000616309 154 ntBASIC0.67□□□□□ -2.3
ABCA4P78363 AL603758.1-201ENST00000618654 241 ntBASIC0.67□□□□□ -2.3
ABCA4P78363 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
ABCA4P78363 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
ABCA4P78363 NACAP2-201ENST00000318548 624 ntBASIC0.66□□□□□ -2.3
ABCA4P78363 SNORA40C-201ENST00000391285 128 ntBASIC0.66□□□□□ -2.3
ABCA4P78363 RNU2-36P-201ENST00000410361 191 ntBASIC0.66□□□□□ -2.3
ABCA4P78363 Z99497.1-201ENST00000421282 135 ntBASIC0.66□□□□□ -2.3
ABCA4P78363 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.66□□□□□ -2.3
ABCA4P78363 AC000111.3-201ENST00000433478 193 ntBASIC0.66□□□□□ -2.3
ABCA4P78363 MEMO1P3-201ENST00000459811 302 ntBASIC0.66□□□□□ -2.3
ABCA4P78363 AC117454.1-201ENST00000491120 168 ntBASIC0.66□□□□□ -2.3
ABCA4P78363 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.66□□□□□ -2.3
ABCA4P78363 LRRC34P2-201ENST00000514850 553 ntBASIC0.66□□□□□ -2.3
ABCA4P78363 RN7SKP258-201ENST00000517151 304 ntBASIC0.66□□□□□ -2.3
ABCA4P78363 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.66□□□□□ -2.3
ABCA4P78363 MRPS36P5-201ENST00000551909 298 ntBASIC0.66□□□□□ -2.3
ABCA4P78363 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.66□□□□□ -2.3
ABCA4P78363 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
ABCA4P78363 RNU5E-8P-201ENST00000363502 116 ntBASIC0.66□□□□□ -2.3
ABCA4P78363 RNU6-637P-201ENST00000384050 107 ntBASIC0.66□□□□□ -2.3
ABCA4P78363 MTCYBP38-201ENST00000417160 1123 ntBASIC0.66□□□□□ -2.3
ABCA4P78363 AL121578.1-201ENST00000428051 892 ntBASIC0.66□□□□□ -2.3
ABCA4P78363 MTCO1P44-201ENST00000441935 243 ntBASIC0.66□□□□□ -2.3
ABCA4P78363 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.66□□□□□ -2.3
ABCA4P78363 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.66□□□□□ -2.3
ABCA4P78363 SNORA25.11-201ENST00000515935 105 ntBASIC0.66□□□□□ -2.3
ABCA4P78363 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.66□□□□□ -2.3
ABCA4P78363 AC079598.5-201ENST00000547460 117 ntBASIC0.66□□□□□ -2.3
ABCA4P78363 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.66□□□□□ -2.3
ABCA4P78363 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.66□□□□□ -2.3
ABCA4P78363 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.66□□□□□ -2.3
ABCA4P78363 MIR6866-201ENST00000638146 69 ntBASIC0.66□□□□□ -2.3
ABCA4P78363 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.66□□□□□ -2.3
ABCA4P78363 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
ABCA4P78363 RNU6-754P-201ENST00000391166 107 ntBASIC0.65□□□□□ -2.31
ABCA4P78363 BTF3L4P2-201ENST00000392798 346 ntBASIC0.65□□□□□ -2.31
ABCA4P78363 RNA5SP511-201ENST00000410487 115 ntBASIC0.65□□□□□ -2.31
ABCA4P78363 MTND4LP14-201ENST00000429447 288 ntBASIC0.65□□□□□ -2.31
ABCA4P78363 AC112492.4-201ENST00000456549 352 ntBASIC0.65□□□□□ -2.31
ABCA4P78363 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.65□□□□□ -2.31
ABCA4P78363 AC103851.1-201ENST00000506833 274 ntBASIC0.65□□□□□ -2.31
ABCA4P78363 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.65□□□□□ -2.31
ABCA4P78363 AC087588.2-201ENST00000617667 426 ntBASIC0.65□□□□□ -2.31
ABCA4P78363 AC084824.4-201ENST00000620106 731 ntBASIC0.65□□□□□ -2.31
ABCA4P78363 AL590396.4-201ENST00000636779 956 ntBASIC0.65□□□□□ -2.31
ABCA4P78363 RNA5SP347-201ENST00000362445 119 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 RNU6-529P-201ENST00000363383 104 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 HMGB1P17-201ENST00000403495 628 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 MTND1P21-201ENST00000412991 285 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 RPL39P6-201ENST00000448289 150 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.64□□□□□ -2.31
ABCA4P78363 AC093249.1-201ENST00000567049 203 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 AC138915.2-201ENST00000569776 97 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 MIR4711-201ENST00000578274 70 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.64□□□□□ -2.31
ABCA4P78363 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.64□□□□□ -2.31
ABCA4P78363 AC009268.2-201ENST00000621925 457 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.64□□□□□ -2.31
ABCA4P78363 RNU6-414P-201ENST00000363705 104 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
ABCA4P78363 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 RPL36AP53-201ENST00000432891 316 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.64□□□□□ -2.31
ABCA4P78363 AC092427.1-201ENST00000439177 601 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.64□□□□□ -2.31
ABCA4P78363 USP9YP17-201ENST00000444617 696 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 AC002381.1-201ENST00000447049 280 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.64□□□□□ -2.31
ABCA4P78363 MTND2P6-201ENST00000455337 1030 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 RNA5SP57-201ENST00000459463 123 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 AC005908.1-201ENST00000468701 347 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.64□□□□□ -2.31
ABCA4P78363 AC010460.2-201ENST00000509054 677 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 AC109329.1-201ENST00000518744 317 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.64□□□□□ -2.31
ABCA4P78363 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.64□□□□□ -2.31
ABCA4P78363 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.64□□□□□ -2.31
ABCA4P78363 MIR4723-201ENST00000585070 81 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 AC087045.1-201ENST00000605856 382 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 AL390208.1-201ENST00000605885 644 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 AL022345.1-201ENST00000607292 135 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 AL355472.4-201ENST00000610233 626 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.64□□□□□ -2.31
ABCA4P78363 AL118508.4-201ENST00000624142 1176 ntBASIC0.64□□□□□ -2.31
ABCA4P78363 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.64□□□□□ -2.31
ABCA4P78363 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.64□□□□□ -2.31
ABCA4P78363 RNU6-778P-201ENST00000363269 103 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 RNA5SP499-201ENST00000363982 119 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 RNU2-70P-201ENST00000410718 179 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 RPL37P10-201ENST00000412884 288 ntBASIC0.63□□□□□ -2.31
ABCA4P78363 AC244453.4-201ENST00000419150 388 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms