Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 SNORA3A-201ENST00000364113 130 ntBASIC2.4□□□□□ -2.03
VCPP55072 Y_RNA.796-201ENST00000364268 102 ntBASIC2.4□□□□□ -2.03
VCPP55072 Y_RNA.799-201ENST00000364992 102 ntBASIC2.4□□□□□ -2.03
VCPP55072 SNORA4.3-201ENST00000365564 137 ntBASIC2.4□□□□□ -2.03
VCPP55072 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.4□□□□□ -2.03
VCPP55072 RNU6-641P-201ENST00000384006 107 ntBASIC2.4□□□□□ -2.03
VCPP55072 SNORD116-1-201ENST00000384335 95 ntBASIC2.4□□□□□ -2.03
VCPP55072 U8.13-201ENST00000390842 128 ntBASIC2.4□□□□□ -2.03
VCPP55072 MTND3P17-201ENST00000416968 344 ntBASIC2.4□□□□□ -2.03
VCPP55072 CYCSP48-201ENST00000417124 323 ntBASIC2.4□□□□□ -2.03
VCPP55072 BX295541.1-201ENST00000417774 250 ntBASIC2.4□□□□□ -2.03
VCPP55072 USP9YP27-201ENST00000418455 438 ntBASIC2.4□□□□□ -2.03
VCPP55072 AC108667.1-201ENST00000428618 249 ntBASIC2.4□□□□□ -2.03
VCPP55072 RPL31P35-201ENST00000431058 377 ntBASIC2.4□□□□□ -2.03
VCPP55072 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.4□□□□□ -2.03
VCPP55072 AC007677.1-201ENST00000445757 515 ntBASIC2.4□□□□□ -2.03
VCPP55072 AC109927.2-201ENST00000506416 303 ntBASIC2.4□□□□□ -2.03
VCPP55072 ARL2BPP4-201ENST00000506854 471 ntBASIC2.4□□□□□ -2.03
VCPP55072 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.4□□□□□ -2.03
VCPP55072 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.4□□□□□ -2.03
VCPP55072 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.4□□□□□ -2.03
VCPP55072 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.4□□□□□ -2.03
VCPP55072 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.4□□□□□ -2.03
VCPP55072 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.4□□□□□ -2.03
VCPP55072 AC105137.2-201ENST00000569073 466 ntBASIC2.4□□□□□ -2.03
VCPP55072 AC245014.2-201ENST00000603689 287 ntBASIC2.4□□□□□ -2.03
VCPP55072 AC246785.4-201ENST00000605374 287 ntBASIC2.4□□□□□ -2.03
VCPP55072 MIR98-201ENST00000606724 119 ntBASIC2.4□□□□□ -2.03
VCPP55072 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VCPP55072 MIR15A-201ENST00000607334 83 ntBASIC2.4□□□□□ -2.03
VCPP55072 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.4□□□□□ -2.03
VCPP55072 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.4□□□□□ -2.03
VCPP55072 AC012640.5-201ENST00000623897 319 ntBASIC2.4□□□□□ -2.03
VCPP55072 AL160394.1-201ENST00000624765 724 ntBASIC2.4□□□□□ -2.03
VCPP55072 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.4□□□□□ -2.03
VCPP55072 SNORA6-201ENST00000384033 151 ntBASIC2.39□□□□□ -2.03
VCPP55072 SNORA24.1-201ENST00000384401 135 ntBASIC2.39□□□□□ -2.03
VCPP55072 RNU6-658P-201ENST00000384606 106 ntBASIC2.39□□□□□ -2.03
VCPP55072 Y_RNA.553-201ENST00000384670 102 ntBASIC2.39□□□□□ -2.03
VCPP55072 SNORA26.9-201ENST00000391322 122 ntBASIC2.39□□□□□ -2.03
VCPP55072 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VCPP55072 MTCO2P16-201ENST00000436962 677 ntBASIC2.39□□□□□ -2.03
VCPP55072 KATNBL1P3-201ENST00000443475 909 ntBASIC2.39□□□□□ -2.03
VCPP55072 DYNLL1P5-201ENST00000467158 270 ntBASIC2.39□□□□□ -2.03
VCPP55072 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.39□□□□□ -2.03
VCPP55072 AC010424.1-201ENST00000506336 297 ntBASIC2.39□□□□□ -2.03
VCPP55072 AC108078.2-201ENST00000510750 236 ntBASIC2.39□□□□□ -2.03
VCPP55072 SCARNA3-201ENST00000517097 143 ntBASIC2.39□□□□□ -2.03
VCPP55072 AP005902.1-201ENST00000521358 186 ntBASIC2.39□□□□□ -2.03
VCPP55072 AP000889.2-201ENST00000532684 490 ntBASIC2.39□□□□□ -2.03
VCPP55072 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.39□□□□□ -2.03
VCPP55072 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.39□□□□□ -2.03
VCPP55072 MIR3913-1-201ENST00000577744 102 ntBASIC2.39□□□□□ -2.03
VCPP55072 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.39□□□□□ -2.03
VCPP55072 AC011494.1-201ENST00000596454 237 ntBASIC2.39□□□□□ -2.03
VCPP55072 AL391813.1-201ENST00000603098 260 ntBASIC2.39□□□□□ -2.03
VCPP55072 AL121992.2-201ENST00000606262 256 ntBASIC2.39□□□□□ -2.03
VCPP55072 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.39□□□□□ -2.03
VCPP55072 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.39□□□□□ -2.03
VCPP55072 AC011939.3-201ENST00000613686 466 ntBASIC2.39□□□□□ -2.03
VCPP55072 AL359547.2-201ENST00000615810 418 ntBASIC2.39□□□□□ -2.03
VCPP55072 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
VCPP55072 MIR7157-201ENST00000635801 60 ntBASIC2.39□□□□□ -2.03
VCPP55072 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
VCPP55072 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VCPP55072 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.38□□□□□ -2.03
VCPP55072 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VCPP55072 AL596028.1-201ENST00000326971 197 ntBASIC2.38□□□□□ -2.03
VCPP55072 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VCPP55072 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VCPP55072 OR5H15-201ENST00000383696 930 ntBASIC2.38□□□□□ -2.03
VCPP55072 SNORA75-201ENST00000384158 137 ntBASIC2.38□□□□□ -2.03
VCPP55072 RNU6-348P-201ENST00000384386 107 ntBASIC2.38□□□□□ -2.03
VCPP55072 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VCPP55072 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.38□□□□□ -2.03
VCPP55072 MICF-203ENST00000432679 129 ntBASIC2.38□□□□□ -2.03
VCPP55072 BRK1P2-201ENST00000442875 223 ntBASIC2.38□□□□□ -2.03
VCPP55072 MTCO1P19-201ENST00000443487 500 ntBASIC2.38□□□□□ -2.03
VCPP55072 AL360221.1-201ENST00000445989 335 ntBASIC2.38□□□□□ -2.03
VCPP55072 Z83846.1-201ENST00000446798 265 ntBASIC2.38□□□□□ -2.03
VCPP55072 MTCYBP1-201ENST00000454315 1119 ntBASIC2.38□□□□□ -2.03
VCPP55072 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.38□□□□□ -2.03
VCPP55072 AC026801.1-201ENST00000497178 464 ntBASIC2.38□□□□□ -2.03
VCPP55072 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.38□□□□□ -2.03
VCPP55072 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.38□□□□□ -2.03
VCPP55072 MTCO3P28-201ENST00000513351 515 ntBASIC2.38□□□□□ -2.03
VCPP55072 RNU6-1315P-201ENST00000517187 99 ntBASIC2.38□□□□□ -2.03
VCPP55072 AC009902.1-201ENST00000519351 183 ntBASIC2.38□□□□□ -2.03
VCPP55072 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.38□□□□□ -2.03
VCPP55072 MTCYBP20-201ENST00000524239 1129 ntBASIC2.38□□□□□ -2.03
VCPP55072 AP003072.2-201ENST00000527756 676 ntBASIC2.38□□□□□ -2.03
VCPP55072 SNRPGP18-201ENST00000553000 214 ntBASIC2.38□□□□□ -2.03
VCPP55072 MIR4528-201ENST00000577763 90 ntBASIC2.38□□□□□ -2.03
VCPP55072 MIR1273C-201ENST00000578669 77 ntBASIC2.38□□□□□ -2.03
VCPP55072 MIR5007-201ENST00000583098 95 ntBASIC2.38□□□□□ -2.03
VCPP55072 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.38□□□□□ -2.03
VCPP55072 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.38□□□□□ -2.03
VCPP55072 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.38□□□□□ -2.03
VCPP55072 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.38□□□□□ -2.03
VCPP55072 AL158032.1-201ENST00000605401 106 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms