Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.98
PDX1P52945 RNU6-393P-201ENST00000384475 107 ntBASIC2.65□□□□□ -1.99
PDX1P52945 SNORA67.4-201ENST00000384688 142 ntBASIC2.65□□□□□ -1.99
PDX1P52945 MIR10A-201ENST00000385043 110 ntBASIC2.65□□□□□ -1.99
PDX1P52945 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.65□□□□□ -1.99
PDX1P52945 RNU6-607P-201ENST00000411283 108 ntBASIC2.65□□□□□ -1.99
PDX1P52945 BX682237.1-201ENST00000415016 335 ntBASIC2.65□□□□□ -1.99
PDX1P52945 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.65□□□□□ -1.99
PDX1P52945 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.65□□□□□ -1.99
PDX1P52945 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.65□□□□□ -1.99
PDX1P52945 AL513328.1-201ENST00000446460 224 ntBASIC2.65□□□□□ -1.99
PDX1P52945 EEF1B2P7-201ENST00000451177 676 ntBASIC2.65□□□□□ -1.99
PDX1P52945 MTND3P16-201ENST00000452205 344 ntBASIC2.65□□□□□ -1.99
PDX1P52945 DYNLL1P5-201ENST00000467158 270 ntBASIC2.65□□□□□ -1.99
PDX1P52945 AC128713.1-201ENST00000471495 306 ntBASIC2.65□□□□□ -1.99
PDX1P52945 RN7SL499P-201ENST00000481141 276 ntBASIC2.65□□□□□ -1.99
PDX1P52945 AC011005.2-201ENST00000487324 359 ntBASIC2.65□□□□□ -1.99
PDX1P52945 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.65□□□□□ -1.99
PDX1P52945 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.65□□□□□ -1.99
PDX1P52945 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PDX1P52945 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.65□□□□□ -1.99
PDX1P52945 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.65□□□□□ -1.99
PDX1P52945 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.65□□□□□ -1.99
PDX1P52945 AC006199.1-201ENST00000548728 219 ntBASIC2.65□□□□□ -1.99
PDX1P52945 DNAJC8P1-201ENST00000554535 372 ntBASIC2.65□□□□□ -1.99
PDX1P52945 MIR5692A1-201ENST00000580523 69 ntBASIC2.65□□□□□ -1.99
PDX1P52945 AC090115.4-201ENST00000609970 188 ntBASIC2.65□□□□□ -1.99
PDX1P52945 MIR6715A-201ENST00000615929 79 ntBASIC2.65□□□□□ -1.99
PDX1P52945 U6atac.1-201ENST00000616025 117 ntBASIC2.65□□□□□ -1.99
PDX1P52945 RMST_4.1-201ENST00000616886 107 ntBASIC2.65□□□□□ -1.99
PDX1P52945 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.65□□□□□ -1.99
PDX1P52945 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.65□□□□□ -1.99
PDX1P52945 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
PDX1P52945 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PDX1P52945 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
PDX1P52945 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
PDX1P52945 OR4G1P-203ENST00000641984 1631 ntBASIC2.64□□□□□ -1.99
PDX1P52945 MTND4P14-201ENST00000435799 1354 ntBASIC2.64□□□□□ -1.99
PDX1P52945 Y_RNA.295-201ENST00000364918 102 ntBASIC2.64□□□□□ -1.99
PDX1P52945 RNU4-66P-201ENST00000365199 138 ntBASIC2.64□□□□□ -1.99
PDX1P52945 Y_RNA.378-201ENST00000365652 113 ntBASIC2.64□□□□□ -1.99
PDX1P52945 U8.9-201ENST00000365667 134 ntBASIC2.64□□□□□ -1.99
PDX1P52945 Y_RNA.453-201ENST00000384223 109 ntBASIC2.64□□□□□ -1.99
PDX1P52945 MIR767-201ENST00000390228 109 ntBASIC2.64□□□□□ -1.99
PDX1P52945 MIR1261-201ENST00000408659 82 ntBASIC2.64□□□□□ -1.99
PDX1P52945 RPL7P37-201ENST00000425095 738 ntBASIC2.64□□□□□ -1.99
PDX1P52945 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.64□□□□□ -1.99
PDX1P52945 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.64□□□□□ -1.99
PDX1P52945 AL121601.2-201ENST00000438019 707 ntBASIC2.64□□□□□ -1.99
PDX1P52945 PRPS1P1-201ENST00000445305 876 ntBASIC2.64□□□□□ -1.99
PDX1P52945 NDUFB1P2-201ENST00000449477 176 ntBASIC2.64□□□□□ -1.99
PDX1P52945 AC233279.1-201ENST00000455300 423 ntBASIC2.64□□□□□ -1.99
PDX1P52945 MTCO3P38-201ENST00000468910 766 ntBASIC2.64□□□□□ -1.99
PDX1P52945 RPS29P25-201ENST00000481709 171 ntBASIC2.64□□□□□ -1.99
PDX1P52945 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.64□□□□□ -1.99
PDX1P52945 AC104136.1-201ENST00000512969 394 ntBASIC2.64□□□□□ -1.99
PDX1P52945 MIR892C-201ENST00000516410 77 ntBASIC2.64□□□□□ -1.99
PDX1P52945 SNORA31.26-201ENST00000517250 137 ntBASIC2.64□□□□□ -1.99
PDX1P52945 MTND4P7-201ENST00000523876 130 ntBASIC2.64□□□□□ -1.99
PDX1P52945 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.64□□□□□ -1.99
PDX1P52945 MTCO3P23-201ENST00000561363 289 ntBASIC2.64□□□□□ -1.99
PDX1P52945 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.64□□□□□ -1.99
PDX1P52945 AC092325.1-201ENST00000566449 554 ntBASIC2.64□□□□□ -1.99
PDX1P52945 MIR6134-201ENST00000617606 109 ntBASIC2.64□□□□□ -1.99
PDX1P52945 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.64□□□□□ -1.99
PDX1P52945 AC024614.3-201ENST00000637860 256 ntBASIC2.64□□□□□ -1.99
PDX1P52945 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
PDX1P52945 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
PDX1P52945 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PDX1P52945 ADAM3A-203ENST00000461344 2157 ntBASIC2.63□□□□□ -1.99
PDX1P52945 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
PDX1P52945 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
PDX1P52945 Y_RNA.231-201ENST00000364358 102 ntBASIC2.63□□□□□ -1.99
PDX1P52945 RNU6-522P-201ENST00000364497 107 ntBASIC2.63□□□□□ -1.99
PDX1P52945 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
PDX1P52945 SNORA26.7-201ENST00000391288 122 ntBASIC2.63□□□□□ -1.99
PDX1P52945 AL356057.3-201ENST00000402607 340 ntBASIC2.63□□□□□ -1.99
PDX1P52945 MIR1277-201ENST00000408536 78 ntBASIC2.63□□□□□ -1.99
PDX1P52945 PGBD4P6-201ENST00000421501 610 ntBASIC2.63□□□□□ -1.99
PDX1P52945 AL627311.1-201ENST00000431514 115 ntBASIC2.63□□□□□ -1.99
PDX1P52945 MTATP6P13-201ENST00000438531 667 ntBASIC2.63□□□□□ -1.99
PDX1P52945 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.63□□□□□ -1.99
PDX1P52945 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.63□□□□□ -1.99
PDX1P52945 AC092001.1-201ENST00000453012 261 ntBASIC2.63□□□□□ -1.99
PDX1P52945 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.63□□□□□ -1.99
PDX1P52945 snoU109.2-201ENST00000459316 135 ntBASIC2.63□□□□□ -1.99
PDX1P52945 AC087884.1-201ENST00000469738 328 ntBASIC2.63□□□□□ -1.99
PDX1P52945 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.63□□□□□ -1.99
PDX1P52945 RPL23AP11-201ENST00000475260 469 ntBASIC2.63□□□□□ -1.99
PDX1P52945 AC069439.1-201ENST00000494739 167 ntBASIC2.63□□□□□ -1.99
PDX1P52945 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.63□□□□□ -1.99
PDX1P52945 RPL38P4-201ENST00000502376 214 ntBASIC2.63□□□□□ -1.99
PDX1P52945 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.63□□□□□ -1.99
PDX1P52945 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.63□□□□□ -1.99
PDX1P52945 RNU1-41P-201ENST00000516161 162 ntBASIC2.63□□□□□ -1.99
PDX1P52945 RNU6-581P-201ENST00000516214 105 ntBASIC2.63□□□□□ -1.99
PDX1P52945 RNU1-48P-201ENST00000516400 162 ntBASIC2.63□□□□□ -1.99
PDX1P52945 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.63□□□□□ -1.99
PDX1P52945 AC090115.3-201ENST00000553218 849 ntBASIC2.63□□□□□ -1.99
PDX1P52945 AC021739.1-201ENST00000559631 174 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms