Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC008945.2-201ENST00000606056 604 ntBASIC2.54□□□□□ -2
NEDD4P46934 AP001330.5-201ENST00000607176 411 ntBASIC2.54□□□□□ -2
NEDD4P46934 AC122108.2-201ENST00000611946 526 ntBASIC2.54□□□□□ -2
NEDD4P46934 AC011890.2-201ENST00000613393 294 ntBASIC2.54□□□□□ -2
NEDD4P46934 AC010378.1-201ENST00000619270 362 ntBASIC2.54□□□□□ -2
NEDD4P46934 AL359880.1-201ENST00000621879 266 ntBASIC2.54□□□□□ -2
NEDD4P46934 AC139792.3-201ENST00000623525 224 ntBASIC2.54□□□□□ -2
NEDD4P46934 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.54□□□□□ -2
NEDD4P46934 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.54□□□□□ -2
NEDD4P46934 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.54□□□□□ -2
NEDD4P46934 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
NEDD4P46934 AC110491.1-201ENST00000562191 2010 ntBASIC2.53□□□□□ -2
NEDD4P46934 RNU6-1085P-201ENST00000363576 107 ntBASIC2.53□□□□□ -2
NEDD4P46934 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
NEDD4P46934 RNU6-1029P-201ENST00000384109 107 ntBASIC2.53□□□□□ -2
NEDD4P46934 SNORA67.3-201ENST00000384366 140 ntBASIC2.53□□□□□ -2
NEDD4P46934 RNA5SP338-201ENST00000410495 85 ntBASIC2.53□□□□□ -2
NEDD4P46934 RNU6-1025P-201ENST00000410629 104 ntBASIC2.53□□□□□ -2
NEDD4P46934 RNU4-46P-201ENST00000410818 138 ntBASIC2.53□□□□□ -2
NEDD4P46934 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.53□□□□□ -2
NEDD4P46934 AL135786.1-201ENST00000415892 214 ntBASIC2.53□□□□□ -2
NEDD4P46934 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.53□□□□□ -2
NEDD4P46934 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.53□□□□□ -2
NEDD4P46934 AL353193.1-201ENST00000421444 268 ntBASIC2.53□□□□□ -2
NEDD4P46934 BPY2DP-201ENST00000422208 265 ntBASIC2.53□□□□□ -2
NEDD4P46934 AL353729.1-201ENST00000425044 720 ntBASIC2.53□□□□□ -2
NEDD4P46934 WARS2P1-201ENST00000429678 537 ntBASIC2.53□□□□□ -2
NEDD4P46934 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.53□□□□□ -2
NEDD4P46934 AC104058.1-201ENST00000448028 297 ntBASIC2.53□□□□□ -2
NEDD4P46934 AC073901.1-201ENST00000462471 408 ntBASIC2.53□□□□□ -2
NEDD4P46934 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.53□□□□□ -2
NEDD4P46934 RPS27AP10-201ENST00000496103 208 ntBASIC2.53□□□□□ -2
NEDD4P46934 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.53□□□□□ -2
NEDD4P46934 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.53□□□□□ -2
NEDD4P46934 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.53□□□□□ -2
NEDD4P46934 AC009902.1-201ENST00000519351 183 ntBASIC2.53□□□□□ -2
NEDD4P46934 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.53□□□□□ -2
NEDD4P46934 SUB1P1-201ENST00000524415 382 ntBASIC2.53□□□□□ -2
NEDD4P46934 ZNF519P2-201ENST00000557032 169 ntBASIC2.53□□□□□ -2
NEDD4P46934 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.53□□□□□ -2
NEDD4P46934 MIR4703-201ENST00000577728 79 ntBASIC2.53□□□□□ -2
NEDD4P46934 AC103810.1-201ENST00000579873 453 ntBASIC2.53□□□□□ -2
NEDD4P46934 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.53□□□□□ -2
NEDD4P46934 HMGN2P15-201ENST00000585707 270 ntBASIC2.53□□□□□ -2
NEDD4P46934 AC126118.1-201ENST00000607744 628 ntBASIC2.53□□□□□ -2
NEDD4P46934 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.53□□□□□ -2
NEDD4P46934 AP000553.5-201ENST00000641933 54 ntBASIC2.53□□□□□ -2
NEDD4P46934 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NEDD4P46934 AL139276.1-201ENST00000311910 1001 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NEDD4P46934 Y_RNA.3-201ENST00000362331 103 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 RNU6-1322P-201ENST00000364309 107 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 SNORA70B-201ENST00000384210 135 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 RN7SKP32-201ENST00000410167 303 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 AC098614.2-201ENST00000426040 255 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.52□□□□□ -2.01
NEDD4P46934 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.52□□□□□ -2.01
NEDD4P46934 AL121890.1-201ENST00000435457 205 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NEDD4P46934 AL353705.4-201ENST00000449661 238 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.52□□□□□ -2.01
NEDD4P46934 RPS29P15-201ENST00000458329 171 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 RNU7-63P-201ENST00000459054 62 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 AL163973.1-201ENST00000484753 577 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 AC104136.1-201ENST00000512969 394 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 AC022634.1-201ENST00000520765 532 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 AC025755.1-201ENST00000521306 278 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 AC104383.1-201ENST00000530297 370 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 MIR5692A1-201ENST00000580523 69 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 MIR548AC-201ENST00000585049 88 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 AC104984.5-201ENST00000586878 94 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.52□□□□□ -2.01
NEDD4P46934 MTND4LP5-201ENST00000605152 292 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 U6.42-201ENST00000618440 107 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 MIR6132-201ENST00000622083 109 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 AC098679.4-201ENST00000624241 654 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.52□□□□□ -2.01
NEDD4P46934 CKAP2P1-201ENST00000555477 2049 ntBASIC2.52□□□□□ -2.01
NEDD4P46934 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.52□□□□□ -2.01
NEDD4P46934 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NEDD4P46934 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.52□□□□□ -2.01
NEDD4P46934 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NEDD4P46934 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
NEDD4P46934 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NEDD4P46934 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.51□□□□□ -2.01
NEDD4P46934 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.51□□□□□ -2.01
NEDD4P46934 OR4G2P-201ENST00000328113 903 ntBASIC2.51□□□□□ -2.01
NEDD4P46934 RNU6-371P-201ENST00000364283 108 ntBASIC2.51□□□□□ -2.01
NEDD4P46934 RNU6-517P-201ENST00000384362 110 ntBASIC2.51□□□□□ -2.01
NEDD4P46934 MIR181A1-201ENST00000385026 110 ntBASIC2.51□□□□□ -2.01
NEDD4P46934 RNU6-550P-201ENST00000391057 101 ntBASIC2.51□□□□□ -2.01
NEDD4P46934 RNA5SP354-201ENST00000391247 136 ntBASIC2.51□□□□□ -2.01
NEDD4P46934 SNORA11.4-201ENST00000408823 129 ntBASIC2.51□□□□□ -2.01
NEDD4P46934 AL139156.1-201ENST00000412785 841 ntBASIC2.51□□□□□ -2.01
NEDD4P46934 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.51□□□□□ -2.01
NEDD4P46934 AL031779.1-201ENST00000415663 330 ntBASIC2.51□□□□□ -2.01
NEDD4P46934 MTCO3P30-201ENST00000426425 670 ntBASIC2.51□□□□□ -2.01
NEDD4P46934 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.51□□□□□ -2.01
NEDD4P46934 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.51□□□□□ -2.01
NEDD4P46934 AC083798.1-201ENST00000472671 131 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms