Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 ADI1P3-201ENST00000549509 470 ntBASIC1.93□□□□□ -2.1
FDFT1P37268 AC092325.1-201ENST00000566449 554 ntBASIC1.93□□□□□ -2.1
FDFT1P37268 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
FDFT1P37268 AC008749.1-201ENST00000597650 306 ntBASIC1.93□□□□□ -2.1
FDFT1P37268 AL096840.1-201ENST00000603287 93 ntBASIC1.93□□□□□ -2.1
FDFT1P37268 SNRPGP19-201ENST00000603826 189 ntBASIC1.93□□□□□ -2.1
FDFT1P37268 AC093424.1-201ENST00000604999 338 ntBASIC1.93□□□□□ -2.1
FDFT1P37268 AC096772.1-201ENST00000609146 564 ntBASIC1.93□□□□□ -2.1
FDFT1P37268 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.93□□□□□ -2.1
FDFT1P37268 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.93□□□□□ -2.1
FDFT1P37268 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.93□□□□□ -2.1
FDFT1P37268 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.93□□□□□ -2.1
FDFT1P37268 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.92□□□□□ -2.1
FDFT1P37268 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.92□□□□□ -2.1
FDFT1P37268 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
FDFT1P37268 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
FDFT1P37268 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
FDFT1P37268 SNORA40.19-201ENST00000390846 128 ntBASIC1.92□□□□□ -2.1
FDFT1P37268 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.92□□□□□ -2.1
FDFT1P37268 MTND2P9-201ENST00000422293 931 ntBASIC1.92□□□□□ -2.1
FDFT1P37268 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.92□□□□□ -2.1
FDFT1P37268 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.92□□□□□ -2.1
FDFT1P37268 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.92□□□□□ -2.1
FDFT1P37268 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.92□□□□□ -2.1
FDFT1P37268 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.92□□□□□ -2.1
FDFT1P37268 RNU7-125P-201ENST00000458760 62 ntBASIC1.92□□□□□ -2.1
FDFT1P37268 AC005178.1-201ENST00000508392 440 ntBASIC1.92□□□□□ -2.1
FDFT1P37268 AC108078.2-201ENST00000510750 236 ntBASIC1.92□□□□□ -2.1
FDFT1P37268 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.92□□□□□ -2.1
FDFT1P37268 RNU6-123P-201ENST00000516163 102 ntBASIC1.92□□□□□ -2.1
FDFT1P37268 Y_RNA.672-201ENST00000516289 104 ntBASIC1.92□□□□□ -2.1
FDFT1P37268 AC034114.1-201ENST00000520293 285 ntBASIC1.92□□□□□ -2.1
FDFT1P37268 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
FDFT1P37268 AC022878.1-201ENST00000530684 149 ntBASIC1.92□□□□□ -2.1
FDFT1P37268 AC135279.1-201ENST00000543493 504 ntBASIC1.92□□□□□ -2.1
FDFT1P37268 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.92□□□□□ -2.1
FDFT1P37268 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.92□□□□□ -2.1
FDFT1P37268 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
FDFT1P37268 DEFB131E-202ENST00000602581 683 ntBASIC1.92□□□□□ -2.1
FDFT1P37268 AL627230.6-201ENST00000611129 280 ntBASIC1.92□□□□□ -2.1
FDFT1P37268 AC092656.1-203ENST00000624134 423 ntBASIC1.92□□□□□ -2.1
FDFT1P37268 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
FDFT1P37268 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
FDFT1P37268 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
FDFT1P37268 SNORA25B-201ENST00000365507 128 ntBASIC1.91□□□□□ -2.1
FDFT1P37268 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
FDFT1P37268 RNU6-641P-201ENST00000384006 107 ntBASIC1.91□□□□□ -2.1
FDFT1P37268 CISD1P1-201ENST00000393907 327 ntBASIC1.91□□□□□ -2.1
FDFT1P37268 RNU2-20P-201ENST00000410425 191 ntBASIC1.91□□□□□ -2.1
FDFT1P37268 Y_RNA.623-201ENST00000411128 95 ntBASIC1.91□□□□□ -2.1
FDFT1P37268 AL365338.1-201ENST00000422282 858 ntBASIC1.91□□□□□ -2.1
FDFT1P37268 AL451074.3-201ENST00000437709 472 ntBASIC1.91□□□□□ -2.1
FDFT1P37268 RPS24P1-201ENST00000438550 371 ntBASIC1.91□□□□□ -2.1
FDFT1P37268 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.91□□□□□ -2.1
FDFT1P37268 AC012308.1-201ENST00000451232 178 ntBASIC1.91□□□□□ -2.1
FDFT1P37268 KATNBL1P6-201ENST00000453433 915 ntBASIC1.91□□□□□ -2.1
FDFT1P37268 snoU109.2-201ENST00000459316 135 ntBASIC1.91□□□□□ -2.1
FDFT1P37268 RPL30P6-201ENST00000475925 342 ntBASIC1.91□□□□□ -2.1
FDFT1P37268 RPL38P4-201ENST00000502376 214 ntBASIC1.91□□□□□ -2.1
FDFT1P37268 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.91□□□□□ -2.1
FDFT1P37268 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.91□□□□□ -2.1
FDFT1P37268 RPL21P5-201ENST00000554662 472 ntBASIC1.91□□□□□ -2.1
FDFT1P37268 AC008015.1-201ENST00000555505 465 ntBASIC1.91□□□□□ -2.1
FDFT1P37268 AC233702.2-202ENST00000562547 291 ntBASIC1.91□□□□□ -2.1
FDFT1P37268 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.91□□□□□ -2.1
FDFT1P37268 MIR4287-201ENST00000579398 78 ntBASIC1.91□□□□□ -2.1
FDFT1P37268 AL031274.2-201ENST00000599419 203 ntBASIC1.91□□□□□ -2.1
FDFT1P37268 AL353778.1-201ENST00000603149 408 ntBASIC1.91□□□□□ -2.1
FDFT1P37268 AL022161.1-201ENST00000604390 213 ntBASIC1.91□□□□□ -2.1
FDFT1P37268 AL022154.1-201ENST00000604698 785 ntBASIC1.91□□□□□ -2.1
FDFT1P37268 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.91□□□□□ -2.1
FDFT1P37268 AC012409.4-201ENST00000612923 249 ntBASIC1.91□□□□□ -2.1
FDFT1P37268 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.91□□□□□ -2.1
FDFT1P37268 MIR412-201ENST00000362142 91 ntBASIC1.9□□□□□ -2.11
FDFT1P37268 SNORD3E-201ENST00000362899 217 ntBASIC1.9□□□□□ -2.11
FDFT1P37268 SNORA16.1-201ENST00000364597 132 ntBASIC1.9□□□□□ -2.11
FDFT1P37268 GSTA9P-201ENST00000406231 611 ntBASIC1.9□□□□□ -2.11
FDFT1P37268 RNU2-39P-201ENST00000410604 198 ntBASIC1.9□□□□□ -2.11
FDFT1P37268 AC138623.1-201ENST00000418060 216 ntBASIC1.9□□□□□ -2.11
FDFT1P37268 HMGN2P19-201ENST00000425149 265 ntBASIC1.9□□□□□ -2.11
FDFT1P37268 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.9□□□□□ -2.11
FDFT1P37268 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.9□□□□□ -2.11
FDFT1P37268 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
FDFT1P37268 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.9□□□□□ -2.11
FDFT1P37268 AC117522.1-201ENST00000509821 380 ntBASIC1.9□□□□□ -2.11
FDFT1P37268 AC107393.1-201ENST00000512403 346 ntBASIC1.9□□□□□ -2.11
FDFT1P37268 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.9□□□□□ -2.11
FDFT1P37268 SNORA4.4-201ENST00000515921 135 ntBASIC1.9□□□□□ -2.11
FDFT1P37268 AC107953.1-201ENST00000522216 297 ntBASIC1.9□□□□□ -2.11
FDFT1P37268 AC007375.1-201ENST00000554513 578 ntBASIC1.9□□□□□ -2.11
FDFT1P37268 AC136619.2-201ENST00000563361 631 ntBASIC1.9□□□□□ -2.11
FDFT1P37268 WISP1-OT1-201ENST00000602893 642 ntBASIC1.9□□□□□ -2.11
FDFT1P37268 AC005034.5-201ENST00000604219 466 ntBASIC1.9□□□□□ -2.11
FDFT1P37268 AL139286.2-201ENST00000606838 396 ntBASIC1.9□□□□□ -2.11
FDFT1P37268 U6.42-201ENST00000618440 107 ntBASIC1.9□□□□□ -2.11
FDFT1P37268 AC091932.3-201ENST00000624223 323 ntBASIC1.9□□□□□ -2.11
FDFT1P37268 AC099654.13-201ENST00000639774 207 ntBASIC1.9□□□□□ -2.11
FDFT1P37268 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
FDFT1P37268 AC103710.2-202ENST00000641454 2853 ntBASIC1.89□□□□□ -2.11
FDFT1P37268 SNORD114-19-201ENST00000363072 75 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms