Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.19□□□□□ -2.06
RFC4P35249 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.19□□□□□ -2.06
RFC4P35249 AL161651.1-201ENST00000440882 223 ntBASIC2.19□□□□□ -2.06
RFC4P35249 USP9YP15-201ENST00000442391 422 ntBASIC2.19□□□□□ -2.06
RFC4P35249 MTND1P3-201ENST00000484956 952 ntBASIC2.19□□□□□ -2.06
RFC4P35249 RPL39P36-201ENST00000490784 156 ntBASIC2.19□□□□□ -2.06
RFC4P35249 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.19□□□□□ -2.06
RFC4P35249 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.19□□□□□ -2.06
RFC4P35249 AC021739.1-201ENST00000559631 174 ntBASIC2.19□□□□□ -2.06
RFC4P35249 ROCK1P1-201ENST00000573767 549 ntBASIC2.19□□□□□ -2.06
RFC4P35249 AC090616.2-202ENST00000584248 222 ntBASIC2.19□□□□□ -2.06
RFC4P35249 MIR7844-201ENST00000616161 122 ntBASIC2.19□□□□□ -2.06
RFC4P35249 AC008993.2-201ENST00000631744 806 ntBASIC2.19□□□□□ -2.06
RFC4P35249 Z99571.1-201ENST00000636677 394 ntBASIC2.19□□□□□ -2.06
RFC4P35249 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.19□□□□□ -2.06
RFC4P35249 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.18□□□□□ -2.06
RFC4P35249 AL359851.1-201ENST00000569460 4997 ntBASIC2.18□□□□□ -2.06
RFC4P35249 NACAP2-201ENST00000318548 624 ntBASIC2.18□□□□□ -2.06
RFC4P35249 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
RFC4P35249 RNU5E-6P-201ENST00000365574 115 ntBASIC2.18□□□□□ -2.06
RFC4P35249 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RFC4P35249 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.18□□□□□ -2.06
RFC4P35249 AC092809.3-201ENST00000415453 231 ntBASIC2.18□□□□□ -2.06
RFC4P35249 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.18□□□□□ -2.06
RFC4P35249 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.18□□□□□ -2.06
RFC4P35249 HMGN2P38-201ENST00000423806 265 ntBASIC2.18□□□□□ -2.06
RFC4P35249 AC007283.2-201ENST00000424739 197 ntBASIC2.18□□□□□ -2.06
RFC4P35249 HMGB1P31-201ENST00000437242 427 ntBASIC2.18□□□□□ -2.06
RFC4P35249 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.18□□□□□ -2.06
RFC4P35249 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.18□□□□□ -2.06
RFC4P35249 KATNBL1P6-201ENST00000453433 915 ntBASIC2.18□□□□□ -2.06
RFC4P35249 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.18□□□□□ -2.06
RFC4P35249 RNA5SP233-201ENST00000459153 113 ntBASIC2.18□□□□□ -2.06
RFC4P35249 SNORD97-201ENST00000459187 142 ntBASIC2.18□□□□□ -2.06
RFC4P35249 AC055731.1-201ENST00000474387 401 ntBASIC2.18□□□□□ -2.06
RFC4P35249 RPL36AP21-201ENST00000490372 323 ntBASIC2.18□□□□□ -2.06
RFC4P35249 AC005178.1-201ENST00000508392 440 ntBASIC2.18□□□□□ -2.06
RFC4P35249 RNU6-703P-201ENST00000516946 107 ntBASIC2.18□□□□□ -2.06
RFC4P35249 CBX3P7-201ENST00000532876 502 ntBASIC2.18□□□□□ -2.06
RFC4P35249 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.18□□□□□ -2.06
RFC4P35249 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.18□□□□□ -2.06
RFC4P35249 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.18□□□□□ -2.06
RFC4P35249 WISP1-OT1-201ENST00000602893 642 ntBASIC2.18□□□□□ -2.06
RFC4P35249 BNIP3P9-201ENST00000603714 553 ntBASIC2.18□□□□□ -2.06
RFC4P35249 AC011939.3-201ENST00000613686 466 ntBASIC2.18□□□□□ -2.06
RFC4P35249 AC130324.3-201ENST00000614165 542 ntBASIC2.18□□□□□ -2.06
RFC4P35249 U6.99-201ENST00000637524 83 ntBASIC2.18□□□□□ -2.06
RFC4P35249 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
RFC4P35249 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
RFC4P35249 RNU5E-5P-201ENST00000365379 116 ntBASIC2.17□□□□□ -2.06
RFC4P35249 SNORD115.1-201ENST00000391109 76 ntBASIC2.17□□□□□ -2.06
RFC4P35249 Y_RNA.608-201ENST00000410647 95 ntBASIC2.17□□□□□ -2.06
RFC4P35249 AL356379.1-201ENST00000414105 126 ntBASIC2.17□□□□□ -2.06
RFC4P35249 AIMP1P2-201ENST00000425294 312 ntBASIC2.17□□□□□ -2.06
RFC4P35249 AL356583.2-201ENST00000426536 280 ntBASIC2.17□□□□□ -2.06
RFC4P35249 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.17□□□□□ -2.06
RFC4P35249 NDUFA5P4-201ENST00000436704 385 ntBASIC2.17□□□□□ -2.06
RFC4P35249 AC093899.1-201ENST00000457984 376 ntBASIC2.17□□□□□ -2.06
RFC4P35249 AP000797.1-201ENST00000478870 387 ntBASIC2.17□□□□□ -2.06
RFC4P35249 AC090255.1-201ENST00000495779 349 ntBASIC2.17□□□□□ -2.06
RFC4P35249 MRPS33P3-201ENST00000513456 322 ntBASIC2.17□□□□□ -2.06
RFC4P35249 RNU6-143P-201ENST00000516942 93 ntBASIC2.17□□□□□ -2.06
RFC4P35249 RNU6-1092P-201ENST00000516955 87 ntBASIC2.17□□□□□ -2.06
RFC4P35249 RNA5SP337-201ENST00000517007 109 ntBASIC2.17□□□□□ -2.06
RFC4P35249 RNU6-232P-201ENST00000517144 64 ntBASIC2.17□□□□□ -2.06
RFC4P35249 RNU2-19P-201ENST00000517288 84 ntBASIC2.17□□□□□ -2.06
RFC4P35249 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.17□□□□□ -2.06
RFC4P35249 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.17□□□□□ -2.06
RFC4P35249 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.17□□□□□ -2.06
RFC4P35249 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.17□□□□□ -2.06
RFC4P35249 AC006199.1-201ENST00000548728 219 ntBASIC2.17□□□□□ -2.06
RFC4P35249 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.17□□□□□ -2.06
RFC4P35249 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.17□□□□□ -2.06
RFC4P35249 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.17□□□□□ -2.06
RFC4P35249 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.17□□□□□ -2.06
RFC4P35249 MTND4P23-201ENST00000447723 1363 ntBASIC2.17□□□□□ -2.06
RFC4P35249 AL109809.4-201ENST00000603520 2185 ntBASIC2.16□□□□□ -2.06
RFC4P35249 Y_RNA.122-201ENST00000363331 96 ntBASIC2.16□□□□□ -2.06
RFC4P35249 RNA5SP37-201ENST00000365420 130 ntBASIC2.16□□□□□ -2.06
RFC4P35249 SNORA4.3-201ENST00000365564 137 ntBASIC2.16□□□□□ -2.06
RFC4P35249 RNU6-946P-201ENST00000383878 107 ntBASIC2.16□□□□□ -2.06
RFC4P35249 SNORA46.1-201ENST00000391069 153 ntBASIC2.16□□□□□ -2.06
RFC4P35249 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RFC4P35249 MIR1302-8-201ENST00000408342 128 ntBASIC2.16□□□□□ -2.06
RFC4P35249 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.16□□□□□ -2.06
RFC4P35249 AC006366.1-201ENST00000422002 759 ntBASIC2.16□□□□□ -2.06
RFC4P35249 PTGES3P4-201ENST00000426243 356 ntBASIC2.16□□□□□ -2.06
RFC4P35249 MTND5P25-201ENST00000430499 799 ntBASIC2.16□□□□□ -2.06
RFC4P35249 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RFC4P35249 UBE2D3P4-201ENST00000441973 436 ntBASIC2.16□□□□□ -2.06
RFC4P35249 HMGN2P10-201ENST00000448085 265 ntBASIC2.16□□□□□ -2.06
RFC4P35249 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.16□□□□□ -2.06
RFC4P35249 SNRPFP4-201ENST00000456366 242 ntBASIC2.16□□□□□ -2.06
RFC4P35249 AL139824.2-201ENST00000458731 1095 ntBASIC2.16□□□□□ -2.06
RFC4P35249 BZW1P2-201ENST00000473537 826 ntBASIC2.16□□□□□ -2.06
RFC4P35249 AC107032.1-201ENST00000485945 480 ntBASIC2.16□□□□□ -2.06
RFC4P35249 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.16□□□□□ -2.06
RFC4P35249 AC010587.1-201ENST00000505809 469 ntBASIC2.16□□□□□ -2.06
RFC4P35249 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
RFC4P35249 RNU6-581P-201ENST00000516214 105 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms