Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 BMS1P22-201ENST00000414726 313 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXA13P31271 TIMM9P3-201ENST00000428659 274 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 SAR1AP4-201ENST00000429225 591 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.92□□□□□ -1.94
HOXA13P31271 AC009969.1-201ENST00000438726 172 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 RPL23AP58-201ENST00000440453 469 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 AC098831.1-201ENST00000440661 216 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 AL513328.1-201ENST00000446460 224 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.92□□□□□ -1.94
HOXA13P31271 AL118520.1-201ENST00000450770 291 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 AL356010.1-201ENST00000456364 102 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXA13P31271 SNRPFP3-201ENST00000457792 225 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 AC083798.1-201ENST00000472671 131 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 AC022493.1-201ENST00000492984 337 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 MRPS36P2-201ENST00000512569 299 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 RNU6-581P-201ENST00000516214 105 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 SNORA31.26-201ENST00000517250 137 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 RPL7P20-201ENST00000520308 745 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 CKS1BP7-201ENST00000522230 235 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 OR5BN1P-201ENST00000532955 829 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXA13P31271 BNIP3P30-201ENST00000601184 574 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 AC002553.4-201ENST00000616896 331 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 YWHAEP7-203ENST00000622054 312 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 AC090617.7-201ENST00000623952 126 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 MIR3662-201ENST00000637030 95 ntBASIC2.92□□□□□ -1.94
HOXA13P31271 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
HOXA13P31271 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.91□□□□□ -1.94
HOXA13P31271 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.91□□□□□ -1.94
HOXA13P31271 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
HOXA13P31271 AC006020.1-201ENST00000420179 1854 ntBASIC2.91□□□□□ -1.94
HOXA13P31271 MIR412-201ENST00000362142 91 ntBASIC2.91□□□□□ -1.94
HOXA13P31271 SNORD3E-201ENST00000362899 217 ntBASIC2.91□□□□□ -1.94
HOXA13P31271 RNU6-1280P-201ENST00000365211 107 ntBASIC2.91□□□□□ -1.94
HOXA13P31271 SNORA40C-201ENST00000391285 128 ntBASIC2.91□□□□□ -1.94
HOXA13P31271 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HOXA13P31271 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HOXA13P31271 RNU2-29P-201ENST00000410423 189 ntBASIC2.91□□□□□ -1.94
HOXA13P31271 Y_RNA.623-201ENST00000411128 95 ntBASIC2.91□□□□□ -1.94
HOXA13P31271 NDUFB4P5-201ENST00000415445 361 ntBASIC2.91□□□□□ -1.94
HOXA13P31271 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXA13P31271 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXA13P31271 HMGN2P10-201ENST00000448085 265 ntBASIC2.91□□□□□ -1.94
HOXA13P31271 AC092001.1-201ENST00000453012 261 ntBASIC2.91□□□□□ -1.94
HOXA13P31271 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXA13P31271 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXA13P31271 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.91□□□□□ -1.94
HOXA13P31271 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXA13P31271 RN7SKP24-201ENST00000515888 284 ntBASIC2.91□□□□□ -1.94
HOXA13P31271 RNA5SP401-201ENST00000515920 127 ntBASIC2.91□□□□□ -1.94
HOXA13P31271 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.91□□□□□ -1.94
HOXA13P31271 BNIP3P6-201ENST00000549284 499 ntBASIC2.91□□□□□ -1.94
HOXA13P31271 HIF1AP1-201ENST00000553642 175 ntBASIC2.91□□□□□ -1.94
HOXA13P31271 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.91□□□□□ -1.94
HOXA13P31271 MIR5583-1-201ENST00000580941 59 ntBASIC2.91□□□□□ -1.94
HOXA13P31271 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.91□□□□□ -1.94
HOXA13P31271 FER-210ENST00000628534 558 ntTSL 5 BASIC2.91□□□□□ -1.94
HOXA13P31271 AC024614.3-201ENST00000637860 256 ntBASIC2.91□□□□□ -1.94
HOXA13P31271 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.91□□□□□ -1.94
HOXA13P31271 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
HOXA13P31271 CASC19-280ENST00000642102 1351 ntBASIC2.9□□□□□ -1.94
HOXA13P31271 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
HOXA13P31271 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.9□□□□□ -1.94
HOXA13P31271 RNY3P3-201ENST00000363816 102 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 RNU6-1322P-201ENST00000364309 107 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 RNU6-715P-201ENST00000365204 103 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 RNU6-166P-201ENST00000384371 107 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 Y_RNA.481-201ENST00000384373 102 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 MIR518C-201ENST00000384822 101 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 MIR10A-201ENST00000385043 110 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 MIR27B-201ENST00000385129 97 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 RPS4XP7-201ENST00000406274 780 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 AC022028.1-201ENST00000412054 408 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 OR9R1P-201ENST00000412200 877 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 EEF1A1P40-201ENST00000412883 573 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXA13P31271 AL358075.3-201ENST00000426289 226 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 AL161651.1-201ENST00000440882 223 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.9□□□□□ -1.95
HOXA13P31271 AL590639.1-201ENST00000456484 337 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 snoU109.2-201ENST00000459316 135 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 AC098799.2-201ENST00000509466 868 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 AP005435.4-201ENST00000529514 284 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 AL512310.1-201ENST00000548639 172 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 AL645944.1-201ENST00000603857 493 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 AP001486.3-201ENST00000615334 372 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 DUXAP9-208ENST00000622815 614 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 AC099654.14-201ENST00000638599 341 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 AL354685.2-201ENST00000448218 1447 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
HOXA13P31271 AC004944.1-201ENST00000517807 3059 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 AC010889.1-201ENST00000566193 2666 ntBASIC2.9□□□□□ -1.95
HOXA13P31271 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.89□□□□□ -1.95
HOXA13P31271 RNU6-552P-201ENST00000362869 119 ntBASIC2.89□□□□□ -1.95
HOXA13P31271 RNU6-867P-201ENST00000364956 107 ntBASIC2.89□□□□□ -1.95
HOXA13P31271 RNU4-20P-201ENST00000365601 151 ntBASIC2.89□□□□□ -1.95
HOXA13P31271 SNORA75B-201ENST00000384053 137 ntBASIC2.89□□□□□ -1.95
HOXA13P31271 RNU6-750P-201ENST00000390946 107 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms