Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 RAB11AP1-201ENST00000442978 646 ntBASIC0.28□□□□□ -2.37
CLIP1P30622 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.28□□□□□ -2.37
CLIP1P30622 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.28□□□□□ -2.37
CLIP1P30622 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.28□□□□□ -2.37
CLIP1P30622 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.28□□□□□ -2.37
CLIP1P30622 SNORA31.17-201ENST00000516953 127 ntBASIC0.28□□□□□ -2.37
CLIP1P30622 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.28□□□□□ -2.37
CLIP1P30622 MIR5093-201ENST00000583199 100 ntBASIC0.28□□□□□ -2.37
CLIP1P30622 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.28□□□□□ -2.37
CLIP1P30622 AC040896.1-201ENST00000613819 479 ntBASIC0.28□□□□□ -2.37
CLIP1P30622 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.28□□□□□ -2.37
CLIP1P30622 SNORD33-201ENST00000362761 85 ntBASIC0.27□□□□□ -2.37
CLIP1P30622 Y_RNA.167-201ENST00000363735 109 ntBASIC0.27□□□□□ -2.37
CLIP1P30622 SNORD82-201ENST00000365530 70 ntBASIC0.27□□□□□ -2.37
CLIP1P30622 MIR605-201ENST00000385078 83 ntBASIC0.27□□□□□ -2.37
CLIP1P30622 RNA5SP25-201ENST00000410815 110 ntBASIC0.27□□□□□ -2.37
CLIP1P30622 AC078974.1-201ENST00000411597 223 ntBASIC0.27□□□□□ -2.37
CLIP1P30622 AC092634.6-201ENST00000418558 192 ntBASIC0.27□□□□□ -2.37
CLIP1P30622 RPL23AP95-201ENST00000426806 265 ntBASIC0.27□□□□□ -2.37
CLIP1P30622 MTCO1P44-201ENST00000441935 243 ntBASIC0.27□□□□□ -2.37
CLIP1P30622 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.27□□□□□ -2.37
CLIP1P30622 RNU5A-7P-201ENST00000515979 116 ntBASIC0.27□□□□□ -2.37
CLIP1P30622 AC124293.1-201ENST00000530034 493 ntBASIC0.27□□□□□ -2.37
CLIP1P30622 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.27□□□□□ -2.37
CLIP1P30622 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
CLIP1P30622 BX284668.6-201ENST00000606899 438 ntBASIC0.27□□□□□ -2.37
CLIP1P30622 AC024060.1-201ENST00000607052 494 ntBASIC0.27□□□□□ -2.37
CLIP1P30622 AL138713.1-201ENST00000624026 2130 ntBASIC0.27□□□□□ -2.37
CLIP1P30622 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
CLIP1P30622 RNU6-45P-201ENST00000384471 107 ntBASIC0.26□□□□□ -2.37
CLIP1P30622 MIR135A2-201ENST00000384854 100 ntBASIC0.26□□□□□ -2.37
CLIP1P30622 RPS26P5-201ENST00000418544 335 ntBASIC0.26□□□□□ -2.37
CLIP1P30622 RPS3AP37-201ENST00000419176 745 ntBASIC0.26□□□□□ -2.37
CLIP1P30622 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.26□□□□□ -2.37
CLIP1P30622 AL606489.2-201ENST00000433886 234 ntBASIC0.26□□□□□ -2.37
CLIP1P30622 MTCO1P53-201ENST00000441633 699 ntBASIC0.26□□□□□ -2.37
CLIP1P30622 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.26□□□□□ -2.37
CLIP1P30622 CYP2C59P-201ENST00000457790 269 ntBASIC0.26□□□□□ -2.37
CLIP1P30622 AL049874.1-201ENST00000489560 388 ntBASIC0.26□□□□□ -2.37
CLIP1P30622 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
CLIP1P30622 AC113420.1-201ENST00000507903 571 ntBASIC0.26□□□□□ -2.37
CLIP1P30622 AC118282.2-201ENST00000508739 374 ntBASIC0.26□□□□□ -2.37
CLIP1P30622 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC0.26□□□□□ -2.37
CLIP1P30622 AC009268.1-201ENST00000561352 1203 ntBASIC0.26□□□□□ -2.37
CLIP1P30622 AL158032.1-201ENST00000605401 106 ntBASIC0.26□□□□□ -2.37
CLIP1P30622 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.26□□□□□ -2.37
CLIP1P30622 AC021851.1-201ENST00000608537 1082 ntBASIC0.26□□□□□ -2.37
CLIP1P30622 AC013470.4-201ENST00000619978 986 ntBASIC0.26□□□□□ -2.37
CLIP1P30622 AC009950.2-201ENST00000636548 183 ntBASIC0.26□□□□□ -2.37
CLIP1P30622 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.26□□□□□ -2.37
CLIP1P30622 SNORA25-201ENST00000384384 134 ntBASIC0.25□□□□□ -2.37
CLIP1P30622 MIR329-1-201ENST00000385028 80 ntBASIC0.25□□□□□ -2.37
CLIP1P30622 MIR1262-201ENST00000408276 93 ntBASIC0.25□□□□□ -2.37
CLIP1P30622 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.25□□□□□ -2.37
CLIP1P30622 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.25□□□□□ -2.37
CLIP1P30622 Z82210.1-201ENST00000440037 231 ntBASIC0.25□□□□□ -2.37
CLIP1P30622 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
CLIP1P30622 RNU6-488P-201ENST00000515918 99 ntBASIC0.25□□□□□ -2.37
CLIP1P30622 RNVU1-2-201ENST00000516326 135 ntBASIC0.25□□□□□ -2.37
CLIP1P30622 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
CLIP1P30622 HSPA8P13-201ENST00000523715 472 ntBASIC0.25□□□□□ -2.37
CLIP1P30622 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.25□□□□□ -2.37
CLIP1P30622 AC124947.2-202ENST00000552735 133 ntBASIC0.25□□□□□ -2.37
CLIP1P30622 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.25□□□□□ -2.37
CLIP1P30622 ELOCP5-201ENST00000604924 333 ntBASIC0.25□□□□□ -2.37
CLIP1P30622 FTX_3.1-201ENST00000610451 147 ntBASIC0.25□□□□□ -2.37
CLIP1P30622 AC091965.5-201ENST00000624785 342 ntBASIC0.25□□□□□ -2.37
CLIP1P30622 RNU5A-1-201ENST00000362698 116 ntBASIC0.24□□□□□ -2.37
CLIP1P30622 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.24□□□□□ -2.37
CLIP1P30622 SNORA2A-201ENST00000383885 135 ntBASIC0.24□□□□□ -2.37
CLIP1P30622 MIR29C-201ENST00000385231 88 ntBASIC0.24□□□□□ -2.37
CLIP1P30622 AL356776.1-201ENST00000406574 447 ntBASIC0.24□□□□□ -2.37
CLIP1P30622 MTCO1P3-201ENST00000429327 192 ntBASIC0.24□□□□□ -2.37
CLIP1P30622 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.24□□□□□ -2.37
CLIP1P30622 KATNBL1P6-201ENST00000453433 915 ntBASIC0.24□□□□□ -2.37
CLIP1P30622 AP001324.2-201ENST00000461163 319 ntBASIC0.24□□□□□ -2.37
CLIP1P30622 AC010409.1-201ENST00000487382 476 ntBASIC0.24□□□□□ -2.37
CLIP1P30622 AC108729.1-201ENST00000487812 947 ntBASIC0.24□□□□□ -2.37
CLIP1P30622 CYCTP-201ENST00000504253 315 ntBASIC0.24□□□□□ -2.37
CLIP1P30622 AC113398.2-201ENST00000507630 558 ntBASIC0.24□□□□□ -2.37
CLIP1P30622 AC005741.1-201ENST00000511094 432 ntBASIC0.24□□□□□ -2.37
CLIP1P30622 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.24□□□□□ -2.37
CLIP1P30622 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
CLIP1P30622 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.24□□□□□ -2.37
CLIP1P30622 AC090079.2-201ENST00000575289 768 ntBASIC0.24□□□□□ -2.37
CLIP1P30622 MIR3937-201ENST00000580135 106 ntBASIC0.24□□□□□ -2.37
CLIP1P30622 AL161729.4-201ENST00000604650 476 ntBASIC0.24□□□□□ -2.37
CLIP1P30622 AC018618.2-201ENST00000604770 446 ntBASIC0.24□□□□□ -2.37
CLIP1P30622 AC004775.1-201ENST00000607389 753 ntBASIC0.24□□□□□ -2.37
CLIP1P30622 AC009509.4-201ENST00000619202 509 ntBASIC0.24□□□□□ -2.37
CLIP1P30622 AC009033.1-201ENST00000624279 431 ntBASIC0.24□□□□□ -2.37
CLIP1P30622 MIR6516-201ENST00000630554 81 ntBASIC0.24□□□□□ -2.37
CLIP1P30622 ZNF663P-202ENST00000641770 1131 ntBASIC0.24□□□□□ -2.37
CLIP1P30622 RNU1-58P-201ENST00000362413 163 ntBASIC0.23□□□□□ -2.37
CLIP1P30622 RNU6-140P-201ENST00000384566 108 ntBASIC0.23□□□□□ -2.37
CLIP1P30622 MIR1267-201ENST00000408723 78 ntBASIC0.23□□□□□ -2.37
CLIP1P30622 AC114482.1-201ENST00000418010 247 ntBASIC0.23□□□□□ -2.37
CLIP1P30622 CETN4P-201ENST00000432407 469 ntBASIC0.23□□□□□ -2.37
CLIP1P30622 RNU6-667P-201ENST00000517186 102 ntBASIC0.23□□□□□ -2.37
CLIP1P30622 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms