Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RPL23AP49-201ENST00000492925 468 ntBASIC2.85□□□□□ -1.95
CAPN3P20807 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.85□□□□□ -1.95
CAPN3P20807 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.85□□□□□ -1.95
CAPN3P20807 SNORA25.11-201ENST00000515935 105 ntBASIC2.85□□□□□ -1.95
CAPN3P20807 RN7SKP219-201ENST00000516825 296 ntBASIC2.85□□□□□ -1.95
CAPN3P20807 AC109479.2-201ENST00000517842 174 ntBASIC2.85□□□□□ -1.95
CAPN3P20807 AC135279.1-201ENST00000543493 504 ntBASIC2.85□□□□□ -1.95
CAPN3P20807 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CAPN3P20807 BNIP3P6-201ENST00000549284 499 ntBASIC2.85□□□□□ -1.95
CAPN3P20807 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.85□□□□□ -1.95
CAPN3P20807 MTND1P15-201ENST00000579262 949 ntBASIC2.85□□□□□ -1.95
CAPN3P20807 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.85□□□□□ -1.95
CAPN3P20807 AC008752.3-201ENST00000588113 712 ntBASIC2.85□□□□□ -1.95
CAPN3P20807 AC069234.5-201ENST00000611056 416 ntBASIC2.85□□□□□ -1.95
CAPN3P20807 AL020991.1-201ENST00000612314 373 ntBASIC2.85□□□□□ -1.95
CAPN3P20807 AC008121.3-201ENST00000618726 433 ntBASIC2.85□□□□□ -1.95
CAPN3P20807 AC018692.3-201ENST00000623929 123 ntBASIC2.85□□□□□ -1.95
CAPN3P20807 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.85□□□□□ -1.95
CAPN3P20807 AC092447.7-201ENST00000422212 1621 ntBASIC2.85□□□□□ -1.95
CAPN3P20807 AC000403.1-201ENST00000613696 3585 ntBASIC2.85□□□□□ -1.95
CAPN3P20807 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
CAPN3P20807 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.84□□□□□ -1.95
CAPN3P20807 AC108206.1-201ENST00000570186 4159 ntBASIC2.84□□□□□ -1.95
CAPN3P20807 MAPK10-266ENST00000641066 6555 ntBASIC2.84□□□□□ -1.95
CAPN3P20807 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
CAPN3P20807 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CAPN3P20807 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.84□□□□□ -1.95
CAPN3P20807 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.84□□□□□ -1.95
CAPN3P20807 RNU6-1245P-201ENST00000411130 106 ntBASIC2.84□□□□□ -1.95
CAPN3P20807 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.84□□□□□ -1.95
CAPN3P20807 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.84□□□□□ -1.95
CAPN3P20807 AL591043.1-201ENST00000432461 424 ntBASIC2.84□□□□□ -1.95
CAPN3P20807 AC133134.1-201ENST00000466800 359 ntBASIC2.84□□□□□ -1.95
CAPN3P20807 RN7SL499P-201ENST00000481141 276 ntBASIC2.84□□□□□ -1.95
CAPN3P20807 AL163973.1-201ENST00000484753 577 ntBASIC2.84□□□□□ -1.95
CAPN3P20807 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.84□□□□□ -1.95
CAPN3P20807 RN7SKP272-201ENST00000516988 232 ntBASIC2.84□□□□□ -1.95
CAPN3P20807 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.84□□□□□ -1.95
CAPN3P20807 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.84□□□□□ -1.95
CAPN3P20807 AC009063.1-201ENST00000563342 702 ntBASIC2.84□□□□□ -1.95
CAPN3P20807 MTCYBP33-201ENST00000575007 1130 ntBASIC2.84□□□□□ -1.95
CAPN3P20807 AL391646.1-201ENST00000603860 190 ntBASIC2.84□□□□□ -1.95
CAPN3P20807 AL033523.1-201ENST00000605153 153 ntBASIC2.84□□□□□ -1.95
CAPN3P20807 AL121917.1-203ENST00000605534 577 ntBASIC2.84□□□□□ -1.95
CAPN3P20807 U2.17-201ENST00000611454 95 ntBASIC2.84□□□□□ -1.95
CAPN3P20807 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
CAPN3P20807 AC107871.2-201ENST00000612894 502 ntBASIC2.84□□□□□ -1.95
CAPN3P20807 U4atac.1-201ENST00000618345 95 ntBASIC2.84□□□□□ -1.95
CAPN3P20807 AC007792.1-201ENST00000623023 402 ntBASIC2.84□□□□□ -1.95
CAPN3P20807 Z69720.2-201ENST00000624755 279 ntBASIC2.84□□□□□ -1.95
CAPN3P20807 MIR622-201ENST00000638396 96 ntBASIC2.84□□□□□ -1.95
CAPN3P20807 AC002543.1-201ENST00000299783 1954 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CAPN3P20807 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
CAPN3P20807 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 RNU6-78P-201ENST00000362897 107 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
CAPN3P20807 RNU6-259P-201ENST00000383999 107 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 RNU6-1127P-201ENST00000384580 107 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 MIR181A2-201ENST00000384863 110 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 RNU6-903P-201ENST00000391270 109 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 AL591416.1-201ENST00000404015 867 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 RPS4XP7-201ENST00000406274 780 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.83□□□□□ -1.96
CAPN3P20807 CYCSP33-201ENST00000414485 327 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 AC074117.2-201ENST00000417130 397 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.83□□□□□ -1.96
CAPN3P20807 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.83□□□□□ -1.96
CAPN3P20807 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.83□□□□□ -1.96
CAPN3P20807 AC073901.1-201ENST00000462471 408 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.83□□□□□ -1.96
CAPN3P20807 AC008526.1-201ENST00000509149 338 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 AC098799.2-201ENST00000509466 868 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.83□□□□□ -1.96
CAPN3P20807 AP005435.4-201ENST00000529514 284 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 HIF1AP1-201ENST00000553642 175 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.83□□□□□ -1.96
CAPN3P20807 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.83□□□□□ -1.96
CAPN3P20807 MTATP6P3-201ENST00000581686 676 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 AL138963.2-201ENST00000605137 226 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 Z99129.1-201ENST00000612510 255 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 uc_338.15-201ENST00000615470 191 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 AL354950.2-201ENST00000617939 290 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 RMST_7.1-201ENST00000621935 268 ntBASIC2.83□□□□□ -1.96
CAPN3P20807 MTND5P26-201ENST00000426018 1752 ntBASIC2.82□□□□□ -1.96
CAPN3P20807 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CAPN3P20807 AP006437.1-201ENST00000641440 3685 ntBASIC2.82□□□□□ -1.96
CAPN3P20807 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.82□□□□□ -1.96
CAPN3P20807 RNU6-527P-201ENST00000363425 104 ntBASIC2.82□□□□□ -1.96
CAPN3P20807 SNORA54-201ENST00000384281 123 ntBASIC2.82□□□□□ -1.96
CAPN3P20807 Y_RNA.559-201ENST00000384686 107 ntBASIC2.82□□□□□ -1.96
CAPN3P20807 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.82□□□□□ -1.96
CAPN3P20807 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.82□□□□□ -1.96
CAPN3P20807 NUP35P1-201ENST00000422734 947 ntBASIC2.82□□□□□ -1.96
CAPN3P20807 EIF4EP4-201ENST00000424916 578 ntBASIC2.82□□□□□ -1.96
CAPN3P20807 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.82□□□□□ -1.96
CAPN3P20807 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.82□□□□□ -1.96
CAPN3P20807 AC117440.1-201ENST00000474107 571 ntBASIC2.82□□□□□ -1.96
CAPN3P20807 AC140059.1-201ENST00000489238 361 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms