Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.57□□□□□ -2
PDGFRAP16234 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.57□□□□□ -2
PDGFRAP16234 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.57□□□□□ -2
PDGFRAP16234 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.57□□□□□ -2
PDGFRAP16234 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.57□□□□□ -2
PDGFRAP16234 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
PDGFRAP16234 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
PDGFRAP16234 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PDGFRAP16234 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
PDGFRAP16234 AC138393.1-203ENST00000327086 343 ntBASIC2.56□□□□□ -2
PDGFRAP16234 RNU6-1120P-201ENST00000362988 108 ntBASIC2.56□□□□□ -2
PDGFRAP16234 RNU6-1103P-201ENST00000384150 107 ntBASIC2.56□□□□□ -2
PDGFRAP16234 RNU1-52P-201ENST00000384190 164 ntBASIC2.56□□□□□ -2
PDGFRAP16234 SNORA41-201ENST00000384675 132 ntBASIC2.56□□□□□ -2
PDGFRAP16234 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.56□□□□□ -2
PDGFRAP16234 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.56□□□□□ -2
PDGFRAP16234 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.56□□□□□ -2
PDGFRAP16234 AC097463.2-201ENST00000421074 142 ntBASIC2.56□□□□□ -2
PDGFRAP16234 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.56□□□□□ -2
PDGFRAP16234 snoU109.2-201ENST00000459316 135 ntBASIC2.56□□□□□ -2
PDGFRAP16234 GMFBP1-201ENST00000467831 427 ntBASIC2.56□□□□□ -2
PDGFRAP16234 AC011005.2-201ENST00000487324 359 ntBASIC2.56□□□□□ -2
PDGFRAP16234 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
PDGFRAP16234 RNU1-86P-201ENST00000516108 154 ntBASIC2.56□□□□□ -2
PDGFRAP16234 MIR892C-201ENST00000516410 77 ntBASIC2.56□□□□□ -2
PDGFRAP16234 RNU1-107P-201ENST00000516617 154 ntBASIC2.56□□□□□ -2
PDGFRAP16234 AC135279.1-201ENST00000543493 504 ntBASIC2.56□□□□□ -2
PDGFRAP16234 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.56□□□□□ -2
PDGFRAP16234 AC079598.5-201ENST00000547460 117 ntBASIC2.56□□□□□ -2
PDGFRAP16234 MIR5571-201ENST00000577998 113 ntBASIC2.56□□□□□ -2
PDGFRAP16234 NBR2-204ENST00000587322 63 ntBASIC2.56□□□□□ -2
PDGFRAP16234 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
PDGFRAP16234 AC025449.1-201ENST00000603896 529 ntBASIC2.56□□□□□ -2
PDGFRAP16234 RMST_4.1-201ENST00000616886 107 ntBASIC2.56□□□□□ -2
PDGFRAP16234 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.56□□□□□ -2
PDGFRAP16234 SCARNA4-202ENST00000625402 129 ntBASIC2.56□□□□□ -2
PDGFRAP16234 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PDGFRAP16234 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.55□□□□□ -2
PDGFRAP16234 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PDGFRAP16234 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.55□□□□□ -2
PDGFRAP16234 Y_RNA.359-201ENST00000365498 102 ntBASIC2.55□□□□□ -2
PDGFRAP16234 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
PDGFRAP16234 DEFB108C-201ENST00000400154 252 ntBASIC2.55□□□□□ -2
PDGFRAP16234 AL359511.1-201ENST00000402970 211 ntBASIC2.55□□□□□ -2
PDGFRAP16234 RNU4-46P-201ENST00000410818 138 ntBASIC2.55□□□□□ -2
PDGFRAP16234 RNU6-607P-201ENST00000411283 108 ntBASIC2.55□□□□□ -2
PDGFRAP16234 MTATP6P18-201ENST00000417994 673 ntBASIC2.55□□□□□ -2
PDGFRAP16234 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.55□□□□□ -2
PDGFRAP16234 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.55□□□□□ -2
PDGFRAP16234 Z75746.1-201ENST00000440243 2080 ntBASIC2.55□□□□□ -2
PDGFRAP16234 MTATP6P26-201ENST00000445926 662 ntBASIC2.55□□□□□ -2
PDGFRAP16234 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.55□□□□□ -2
PDGFRAP16234 AC027673.1-201ENST00000456245 405 ntBASIC2.55□□□□□ -2
PDGFRAP16234 RPS29P15-201ENST00000458329 171 ntBASIC2.55□□□□□ -2
PDGFRAP16234 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.55□□□□□ -2
PDGFRAP16234 RPS27P27-201ENST00000498779 255 ntBASIC2.55□□□□□ -2
PDGFRAP16234 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.55□□□□□ -2
PDGFRAP16234 AC010493.1-201ENST00000513479 292 ntBASIC2.55□□□□□ -2
PDGFRAP16234 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.55□□□□□ -2
PDGFRAP16234 CR383656.8-201ENST00000549046 145 ntBASIC2.55□□□□□ -2
PDGFRAP16234 MIR4703-201ENST00000577728 79 ntBASIC2.55□□□□□ -2
PDGFRAP16234 AC105245.1-201ENST00000581934 244 ntBASIC2.55□□□□□ -2
PDGFRAP16234 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.55□□□□□ -2
PDGFRAP16234 AC073539.2-201ENST00000597113 165 ntBASIC2.55□□□□□ -2
PDGFRAP16234 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.55□□□□□ -2
PDGFRAP16234 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.55□□□□□ -2
PDGFRAP16234 AC005609.4-201ENST00000625071 447 ntBASIC2.55□□□□□ -2
PDGFRAP16234 MIR203B-201ENST00000636080 86 ntBASIC2.55□□□□□ -2
PDGFRAP16234 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.55□□□□□ -2
PDGFRAP16234 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.55□□□□□ -2
PDGFRAP16234 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.55□□□□□ -2
PDGFRAP16234 ZNF271P-202ENST00000465539 1970 ntBASIC2.54□□□□□ -2
PDGFRAP16234 AC069528.2-201ENST00000624849 1991 ntBASIC2.54□□□□□ -2
PDGFRAP16234 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.54□□□□□ -2
PDGFRAP16234 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PDGFRAP16234 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.54□□□□□ -2
PDGFRAP16234 Y_RNA.159-201ENST00000363674 87 ntBASIC2.54□□□□□ -2
PDGFRAP16234 XGY1-201ENST00000381172 446 ntBASIC2.54□□□□□ -2
PDGFRAP16234 RNU6-1119P-201ENST00000384349 108 ntBASIC2.54□□□□□ -2
PDGFRAP16234 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.54□□□□□ -2
PDGFRAP16234 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.54□□□□□ -2
PDGFRAP16234 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.54□□□□□ -2
PDGFRAP16234 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.54□□□□□ -2
PDGFRAP16234 CALM1P1-201ENST00000442082 433 ntBASIC2.54□□□□□ -2
PDGFRAP16234 MTND2P22-201ENST00000444325 1033 ntBASIC2.54□□□□□ -2
PDGFRAP16234 MTND1P18-201ENST00000448191 573 ntBASIC2.54□□□□□ -2
PDGFRAP16234 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.54□□□□□ -2
PDGFRAP16234 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.54□□□□□ -2
PDGFRAP16234 MTCO2P18-201ENST00000457151 658 ntBASIC2.54□□□□□ -2
PDGFRAP16234 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.54□□□□□ -2
PDGFRAP16234 MED28P2-201ENST00000475771 317 ntBASIC2.54□□□□□ -2
PDGFRAP16234 AC079382.1-201ENST00000493346 557 ntBASIC2.54□□□□□ -2
PDGFRAP16234 MTND3P25-201ENST00000509243 135 ntBASIC2.54□□□□□ -2
PDGFRAP16234 AC105417.1-201ENST00000514691 285 ntBASIC2.54□□□□□ -2
PDGFRAP16234 RNA5SP82-201ENST00000516707 92 ntBASIC2.54□□□□□ -2
PDGFRAP16234 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.54□□□□□ -2
PDGFRAP16234 MYL12BP1-201ENST00000569826 507 ntBASIC2.54□□□□□ -2
PDGFRAP16234 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.54□□□□□ -2
PDGFRAP16234 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.54□□□□□ -2
PDGFRAP16234 MIR3529-201ENST00000637713 78 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms