Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
HLA-DOAP06340 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DOAP06340 MIR22-201ENST00000362190 85 ntBASIC3.66□□□□□ -1.82
HLA-DOAP06340 Y_RNA.2-201ENST00000362330 96 ntBASIC3.66□□□□□ -1.82
HLA-DOAP06340 Y_RNA.158-201ENST00000363651 101 ntBASIC3.66□□□□□ -1.82
HLA-DOAP06340 Y_RNA.557-201ENST00000384680 107 ntBASIC3.66□□□□□ -1.82
HLA-DOAP06340 SNORD67-201ENST00000390833 111 ntBASIC3.66□□□□□ -1.82
HLA-DOAP06340 AL513331.1-201ENST00000411908 397 ntBASIC3.66□□□□□ -1.82
HLA-DOAP06340 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.66□□□□□ -1.82
HLA-DOAP06340 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DOAP06340 AC022018.1-201ENST00000430685 241 ntBASIC3.66□□□□□ -1.82
HLA-DOAP06340 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DOAP06340 RPL31P60-201ENST00000478450 367 ntBASIC3.66□□□□□ -1.82
HLA-DOAP06340 RPS4XP22-201ENST00000480755 780 ntBASIC3.66□□□□□ -1.82
HLA-DOAP06340 HMGB1P30-201ENST00000492455 606 ntBASIC3.66□□□□□ -1.82
HLA-DOAP06340 AC097462.2-201ENST00000504623 481 ntBASIC3.66□□□□□ -1.82
HLA-DOAP06340 AC022493.2-201ENST00000506122 481 ntBASIC3.66□□□□□ -1.82
HLA-DOAP06340 AC087854.1-201ENST00000519706 414 ntBASIC3.66□□□□□ -1.82
HLA-DOAP06340 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DOAP06340 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DOAP06340 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.66□□□□□ -1.82
HLA-DOAP06340 AC002545.1-201ENST00000592511 181 ntBASIC3.66□□□□□ -1.82
HLA-DOAP06340 RNU6-85P-201ENST00000605989 107 ntBASIC3.66□□□□□ -1.82
HLA-DOAP06340 AC034102.8-201ENST00000615146 484 ntBASIC3.66□□□□□ -1.82
HLA-DOAP06340 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.66□□□□□ -1.82
HLA-DOAP06340 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
HLA-DOAP06340 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DOAP06340 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HLA-DOAP06340 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HLA-DOAP06340 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
HLA-DOAP06340 DEFB108F-201ENST00000344638 222 ntBASIC3.65□□□□□ -1.83
HLA-DOAP06340 RNU6-7-201ENST00000364784 107 ntBASIC3.65□□□□□ -1.83
HLA-DOAP06340 RNU6-8-201ENST00000365467 107 ntBASIC3.65□□□□□ -1.83
HLA-DOAP06340 Y_RNA.645-201ENST00000391229 102 ntBASIC3.65□□□□□ -1.83
HLA-DOAP06340 CYCSP33-201ENST00000414485 327 ntBASIC3.65□□□□□ -1.83
HLA-DOAP06340 AC080125.1-201ENST00000414888 684 ntBASIC3.65□□□□□ -1.83
HLA-DOAP06340 MRPS18CP6-201ENST00000423587 223 ntBASIC3.65□□□□□ -1.83
HLA-DOAP06340 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.65□□□□□ -1.83
HLA-DOAP06340 SNORD5.1-201ENST00000458800 75 ntBASIC3.65□□□□□ -1.83
HLA-DOAP06340 AC078817.1-201ENST00000492623 435 ntBASIC3.65□□□□□ -1.83
HLA-DOAP06340 AC026801.1-201ENST00000497178 464 ntBASIC3.65□□□□□ -1.83
HLA-DOAP06340 RNU6-927P-201ENST00000516199 100 ntBASIC3.65□□□□□ -1.83
HLA-DOAP06340 RNU6-764P-201ENST00000516396 105 ntBASIC3.65□□□□□ -1.83
HLA-DOAP06340 RNU6-1256P-201ENST00000516539 103 ntBASIC3.65□□□□□ -1.83
HLA-DOAP06340 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.65□□□□□ -1.83
HLA-DOAP06340 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.65□□□□□ -1.83
HLA-DOAP06340 AC123912.5-201ENST00000605470 343 ntBASIC3.65□□□□□ -1.83
HLA-DOAP06340 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DOAP06340 AL031601.2-202ENST00000622650 282 ntBASIC3.65□□□□□ -1.83
HLA-DOAP06340 AC138627.2-201ENST00000624202 601 ntBASIC3.65□□□□□ -1.83
HLA-DOAP06340 AC073476.4-201ENST00000628409 72 ntBASIC3.65□□□□□ -1.83
HLA-DOAP06340 AL137790.1-201ENST00000634283 177 ntBASIC3.65□□□□□ -1.83
HLA-DOAP06340 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
HLA-DOAP06340 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HLA-DOAP06340 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DOAP06340 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DOAP06340 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DOAP06340 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DOAP06340 RNU6-600P-201ENST00000362524 99 ntBASIC3.64□□□□□ -1.83
HLA-DOAP06340 Y_RNA.48-201ENST00000362710 103 ntBASIC3.64□□□□□ -1.83
HLA-DOAP06340 Y_RNA.252-201ENST00000364556 101 ntBASIC3.64□□□□□ -1.83
HLA-DOAP06340 RNU2-3P-201ENST00000410144 191 ntBASIC3.64□□□□□ -1.83
HLA-DOAP06340 AC008267.5-201ENST00000424928 265 ntBASIC3.64□□□□□ -1.83
HLA-DOAP06340 FTH1P6-201ENST00000430768 320 ntBASIC3.64□□□□□ -1.83
HLA-DOAP06340 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DOAP06340 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DOAP06340 SNORA59A-201ENST00000459326 152 ntBASIC3.64□□□□□ -1.83
HLA-DOAP06340 AC022493.1-201ENST00000492984 337 ntBASIC3.64□□□□□ -1.83
HLA-DOAP06340 FTH1P9-201ENST00000513251 355 ntBASIC3.64□□□□□ -1.83
HLA-DOAP06340 RNU1-86P-201ENST00000516108 154 ntBASIC3.64□□□□□ -1.83
HLA-DOAP06340 SNORA31.8-201ENST00000516327 108 ntBASIC3.64□□□□□ -1.83
HLA-DOAP06340 RNU1-107P-201ENST00000516617 154 ntBASIC3.64□□□□□ -1.83
HLA-DOAP06340 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.64□□□□□ -1.83
HLA-DOAP06340 AC098826.3-201ENST00000603823 466 ntBASIC3.64□□□□□ -1.83
HLA-DOAP06340 AC104695.3-201ENST00000604052 296 ntBASIC3.64□□□□□ -1.83
HLA-DOAP06340 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DOAP06340 AL591516.1-201ENST00000611326 274 ntBASIC3.64□□□□□ -1.83
HLA-DOAP06340 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.64□□□□□ -1.83
HLA-DOAP06340 AL512643.1-201ENST00000635735 524 ntBASIC3.64□□□□□ -1.83
HLA-DOAP06340 HSPA8P1-201ENST00000425843 1833 ntBASIC3.64□□□□□ -1.83
HLA-DOAP06340 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DOAP06340 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DOAP06340 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HLA-DOAP06340 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
HLA-DOAP06340 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.64□□□□□ -1.83
HLA-DOAP06340 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DOAP06340 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DOAP06340 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DOAP06340 Y_RNA.193-201ENST00000363979 102 ntBASIC3.63□□□□□ -1.83
HLA-DOAP06340 AP002088.1-201ENST00000382740 395 ntBASIC3.63□□□□□ -1.83
HLA-DOAP06340 RNU6-214P-201ENST00000384130 107 ntBASIC3.63□□□□□ -1.83
HLA-DOAP06340 MIR517A-201ENST00000385001 87 ntBASIC3.63□□□□□ -1.83
HLA-DOAP06340 EI24P1-201ENST00000416584 867 ntBASIC3.63□□□□□ -1.83
HLA-DOAP06340 MTCYBP10-201ENST00000424905 650 ntBASIC3.63□□□□□ -1.83
HLA-DOAP06340 RPL21P66-201ENST00000426566 466 ntBASIC3.63□□□□□ -1.83
HLA-DOAP06340 MTCYBP9-201ENST00000431021 303 ntBASIC3.63□□□□□ -1.83
HLA-DOAP06340 AC107083.1-201ENST00000439643 279 ntBASIC3.63□□□□□ -1.83
HLA-DOAP06340 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.63□□□□□ -1.83
HLA-DOAP06340 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.63□□□□□ -1.83
HLA-DOAP06340 BTF3P15-201ENST00000455606 336 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms