Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2□□□□□ -2.09
P04436 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
P04436 RNU6-371P-201ENST00000364283 108 ntBASIC1.99□□□□□ -2.09
P04436 RNU6-384P-201ENST00000364900 104 ntBASIC1.99□□□□□ -2.09
P04436 RNU6-282P-201ENST00000365357 103 ntBASIC1.99□□□□□ -2.09
P04436 Y_RNA.367-201ENST00000365544 101 ntBASIC1.99□□□□□ -2.09
P04436 RNU6-395P-201ENST00000365662 106 ntBASIC1.99□□□□□ -2.09
P04436 RNU6-348P-201ENST00000384386 107 ntBASIC1.99□□□□□ -2.09
P04436 SNORA48.3-201ENST00000391081 134 ntBASIC1.99□□□□□ -2.09
P04436 MIR1302-8-201ENST00000408342 128 ntBASIC1.99□□□□□ -2.09
P04436 MIR1261-201ENST00000408659 82 ntBASIC1.99□□□□□ -2.09
P04436 RN7SKP32-201ENST00000410167 303 ntBASIC1.99□□□□□ -2.09
P04436 RNU2-63P-201ENST00000410792 194 ntBASIC1.99□□□□□ -2.09
P04436 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.99□□□□□ -2.09
P04436 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.99□□□□□ -2.09
P04436 BX295541.1-201ENST00000417774 250 ntBASIC1.99□□□□□ -2.09
P04436 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.99□□□□□ -2.09
P04436 MTCYBP5-201ENST00000423752 1135 ntBASIC1.99□□□□□ -2.09
P04436 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.99□□□□□ -2.09
P04436 MTATP6P17-201ENST00000431030 672 ntBASIC1.99□□□□□ -2.09
P04436 USP9YP29-201ENST00000445112 563 ntBASIC1.99□□□□□ -2.09
P04436 RPL7P12-201ENST00000446719 750 ntBASIC1.99□□□□□ -2.09
P04436 AL360271.2-201ENST00000447710 161 ntBASIC1.99□□□□□ -2.09
P04436 AL583843.1-201ENST00000456070 346 ntBASIC1.99□□□□□ -2.09
P04436 snoU109.1-201ENST00000459339 135 ntBASIC1.99□□□□□ -2.09
P04436 RPL7P43-201ENST00000478876 753 ntBASIC1.99□□□□□ -2.09
P04436 AC011005.2-201ENST00000487324 359 ntBASIC1.99□□□□□ -2.09
P04436 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.99□□□□□ -2.09
P04436 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.99□□□□□ -2.09
P04436 SMURF2P1-201ENST00000514992 481 ntBASIC1.99□□□□□ -2.09
P04436 SCARNA16.3-201ENST00000516595 184 ntBASIC1.99□□□□□ -2.09
P04436 RNU6-685P-201ENST00000517088 95 ntBASIC1.99□□□□□ -2.09
P04436 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.99□□□□□ -2.09
P04436 AC087241.2-201ENST00000535801 324 ntBASIC1.99□□□□□ -2.09
P04436 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
P04436 AC110760.3-201ENST00000598794 467 ntBASIC1.99□□□□□ -2.09
P04436 AC025811.1-201ENST00000604312 472 ntBASIC1.99□□□□□ -2.09
P04436 AL670379.10-201ENST00000604330 253 ntBASIC1.99□□□□□ -2.09
P04436 AL158032.1-201ENST00000605401 106 ntBASIC1.99□□□□□ -2.09
P04436 AL670379.9-201ENST00000605428 253 ntBASIC1.99□□□□□ -2.09
P04436 AC098614.4-201ENST00000607601 462 ntBASIC1.99□□□□□ -2.09
P04436 AL161423.1-201ENST00000613700 262 ntBASIC1.99□□□□□ -2.09
P04436 AC008147.4-201ENST00000617570 1204 ntBASIC1.99□□□□□ -2.09
P04436 MIR5739-201ENST00000619803 80 ntBASIC1.99□□□□□ -2.09
P04436 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.99□□□□□ -2.09
P04436 AC078883.4-201ENST00000623218 367 ntBASIC1.99□□□□□ -2.09
P04436 AL359740.1-201ENST00000624340 592 ntBASIC1.99□□□□□ -2.09
P04436 MIR203B-201ENST00000636080 86 ntBASIC1.99□□□□□ -2.09
P04436 MIR3974-201ENST00000637126 96 ntBASIC1.99□□□□□ -2.09
P04436 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.98□□□□□ -2.09
P04436 AC138393.1-203ENST00000327086 343 ntBASIC1.98□□□□□ -2.09
P04436 RNU1-72P-201ENST00000362976 153 ntBASIC1.98□□□□□ -2.09
P04436 SNORD14B-201ENST00000364533 90 ntBASIC1.98□□□□□ -2.09
P04436 SNORD115-7-201ENST00000365306 82 ntBASIC1.98□□□□□ -2.09
P04436 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
P04436 SNORA75-201ENST00000384158 137 ntBASIC1.98□□□□□ -2.09
P04436 Y_RNA.576-201ENST00000384781 102 ntBASIC1.98□□□□□ -2.09
P04436 MIR144-201ENST00000384886 86 ntBASIC1.98□□□□□ -2.09
P04436 FTH1P15-201ENST00000406984 280 ntBASIC1.98□□□□□ -2.09
P04436 SNORD23.1-201ENST00000408212 104 ntBASIC1.98□□□□□ -2.09
P04436 RN7SKP158-201ENST00000410453 326 ntBASIC1.98□□□□□ -2.09
P04436 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.98□□□□□ -2.09
P04436 AC000111.3-201ENST00000433478 193 ntBASIC1.98□□□□□ -2.09
P04436 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.98□□□□□ -2.09
P04436 AC244505.5-201ENST00000443639 207 ntBASIC1.98□□□□□ -2.09
P04436 AL136380.1-201ENST00000447970 162 ntBASIC1.98□□□□□ -2.09
P04436 AC098826.2-201ENST00000452011 651 ntBASIC1.98□□□□□ -2.09
P04436 AC116562.3-201ENST00000506136 177 ntBASIC1.98□□□□□ -2.09
P04436 AC092436.1-201ENST00000506450 503 ntBASIC1.98□□□□□ -2.09
P04436 AC091965.2-201ENST00000512324 613 ntBASIC1.98□□□□□ -2.09
P04436 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.98□□□□□ -2.09
P04436 SNORA31.11-201ENST00000516528 139 ntBASIC1.98□□□□□ -2.09
P04436 IGKV3-31-201ENST00000523109 329 ntBASIC1.98□□□□□ -2.09
P04436 AC068587.5-201ENST00000528506 175 ntBASIC1.98□□□□□ -2.09
P04436 AC118273.2-201ENST00000532092 465 ntBASIC1.98□□□□□ -2.09
P04436 AP000889.2-201ENST00000532684 490 ntBASIC1.98□□□□□ -2.09
P04436 CYCSP26-201ENST00000534107 320 ntBASIC1.98□□□□□ -2.09
P04436 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.98□□□□□ -2.09
P04436 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.98□□□□□ -2.09
P04436 ADI1P3-201ENST00000549509 470 ntBASIC1.98□□□□□ -2.09
P04436 RPS3AP23-202ENST00000574601 686 ntBASIC1.98□□□□□ -2.09
P04436 MIR3682-201ENST00000581338 84 ntBASIC1.98□□□□□ -2.09
P04436 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.98□□□□□ -2.09
P04436 AC087045.1-201ENST00000605856 382 ntBASIC1.98□□□□□ -2.09
P04436 MIR219B-201ENST00000637023 88 ntBASIC1.98□□□□□ -2.09
P04436 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.98□□□□□ -2.09
P04436 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
P04436 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
P04436 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
P04436 RNU6-942P-201ENST00000363002 107 ntBASIC1.97□□□□□ -2.09
P04436 RNA5SP240-201ENST00000365355 128 ntBASIC1.97□□□□□ -2.09
P04436 MIR1-2-201ENST00000384961 85 ntBASIC1.97□□□□□ -2.09
P04436 MIR95-201ENST00000385072 81 ntBASIC1.97□□□□□ -2.09
P04436 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
P04436 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
P04436 Y_RNA.623-201ENST00000411128 95 ntBASIC1.97□□□□□ -2.09
P04436 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.97□□□□□ -2.09
P04436 AC090960.1-201ENST00000421072 306 ntBASIC1.97□□□□□ -2.09
P04436 AL365338.1-201ENST00000422282 858 ntBASIC1.97□□□□□ -2.09
P04436 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 221.9 ms