Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 NDUFB4P7-201ENST00000423198 363 ntBASIC0.26□□□□□ -2.37
SPTA1P02549 AC098831.1-201ENST00000440661 216 ntBASIC0.26□□□□□ -2.37
SPTA1P02549 AL049734.2-201ENST00000441066 616 ntBASIC0.26□□□□□ -2.37
SPTA1P02549 RAC1P7-201ENST00000445367 377 ntBASIC0.26□□□□□ -2.37
SPTA1P02549 AL157398.1-201ENST00000452981 186 ntBASIC0.26□□□□□ -2.37
SPTA1P02549 KATNBL1P6-201ENST00000453433 915 ntBASIC0.26□□□□□ -2.37
SPTA1P02549 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.26□□□□□ -2.37
SPTA1P02549 MIR4422-201ENST00000581938 83 ntBASIC0.26□□□□□ -2.37
SPTA1P02549 BNIP3P16-201ENST00000589779 534 ntBASIC0.26□□□□□ -2.37
SPTA1P02549 AL669831.4-202ENST00000590817 238 ntBASIC0.26□□□□□ -2.37
SPTA1P02549 AL162730.1-201ENST00000605734 292 ntBASIC0.26□□□□□ -2.37
SPTA1P02549 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.26□□□□□ -2.37
SPTA1P02549 MIR1267-201ENST00000408723 78 ntBASIC0.25□□□□□ -2.37
SPTA1P02549 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.25□□□□□ -2.37
SPTA1P02549 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.25□□□□□ -2.37
SPTA1P02549 USP9YP24-201ENST00000434374 697 ntBASIC0.25□□□□□ -2.37
SPTA1P02549 AC112771.1-201ENST00000463581 102 ntBASIC0.25□□□□□ -2.37
SPTA1P02549 HSPA8P13-201ENST00000523715 472 ntBASIC0.25□□□□□ -2.37
SPTA1P02549 MIR3937-201ENST00000580135 106 ntBASIC0.25□□□□□ -2.37
SPTA1P02549 AL021879.1-201ENST00000611756 288 ntBASIC0.25□□□□□ -2.37
SPTA1P02549 AL512506.2-201ENST00000624472 458 ntBASIC0.25□□□□□ -2.37
SPTA1P02549 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.25□□□□□ -2.37
SPTA1P02549 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.25□□□□□ -2.37
SPTA1P02549 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.25□□□□□ -2.37
SPTA1P02549 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.25□□□□□ -2.37
SPTA1P02549 Y_RNA.255-201ENST00000364581 97 ntBASIC0.25□□□□□ -2.37
SPTA1P02549 MIR561-201ENST00000385216 97 ntBASIC0.25□□□□□ -2.37
SPTA1P02549 RPS3AP37-201ENST00000419176 745 ntBASIC0.25□□□□□ -2.37
SPTA1P02549 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.25□□□□□ -2.37
SPTA1P02549 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.25□□□□□ -2.37
SPTA1P02549 RPS29P8-201ENST00000445109 171 ntBASIC0.25□□□□□ -2.37
SPTA1P02549 PGBD4P5-201ENST00000445958 426 ntBASIC0.25□□□□□ -2.37
SPTA1P02549 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
SPTA1P02549 CYB5AP5-201ENST00000549779 389 ntBASIC0.25□□□□□ -2.37
SPTA1P02549 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.25□□□□□ -2.37
SPTA1P02549 GDI2P1-201ENST00000429312 1336 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 RPS3AP36-201ENST00000398190 775 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 AC016717.1-201ENST00000448918 286 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.24□□□□□ -2.37
SPTA1P02549 AL163195.1-201ENST00000496941 348 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.24□□□□□ -2.37
SPTA1P02549 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
SPTA1P02549 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.24□□□□□ -2.37
SPTA1P02549 MIR4713-201ENST00000582691 75 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 BBIP1P1-201ENST00000602999 279 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 AC018618.2-201ENST00000604770 446 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 AL359314.1-201ENST00000616913 261 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 AC009033.1-201ENST00000624279 431 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
SPTA1P02549 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
SPTA1P02549 RNU6-1184P-201ENST00000384588 108 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 MIR95-201ENST00000385072 81 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 MIR1302-8-201ENST00000408342 128 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 RPL37P10-201ENST00000412884 288 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 AC009518.2-201ENST00000418056 731 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 MTCO3P5-201ENST00000433620 714 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 AC145146.1-201ENST00000496370 254 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 CYCTP-201ENST00000504253 315 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC0.24□□□□□ -2.37
SPTA1P02549 COPS8P3-201ENST00000526024 482 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 ANKRD36BP2-206ENST00000575193 1245 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 Y_RNA.757-201ENST00000578934 114 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 MIR4768-201ENST00000585270 74 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 AC092354.1-201ENST00000606057 376 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 Z82243.1-201ENST00000609432 473 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 MIR5739-201ENST00000619803 80 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 AC040168.1-201ENST00000623594 991 ntBASIC0.24□□□□□ -2.37
SPTA1P02549 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.23□□□□□ -2.37
SPTA1P02549 RNU6-414P-201ENST00000363705 104 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 RNU6-1035P-201ENST00000384477 107 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 MIR506-201ENST00000384998 124 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 RNU6-910P-201ENST00000390844 107 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 AC138623.1-201ENST00000418060 216 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 MRPS17P3-201ENST00000465453 385 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 LARP1BP2-201ENST00000486594 519 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.23□□□□□ -2.37
SPTA1P02549 AC074344.1-201ENST00000512823 224 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 RNU6-902P-201ENST00000517212 91 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.23□□□□□ -2.37
SPTA1P02549 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.23□□□□□ -2.37
SPTA1P02549 AC080013.4-201ENST00000607624 649 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 AC091925.2-201ENST00000625059 256 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 AC092192.1-201ENST00000633154 1018 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.23□□□□□ -2.37
SPTA1P02549 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
SPTA1P02549 ZNF680P1-201ENST00000436625 1469 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 SNORD18A-201ENST00000363753 72 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 RNU6-339P-201ENST00000384310 107 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 MIR1207-201ENST00000408249 87 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.23□□□□□ -2.37
SPTA1P02549 RPS26P55-201ENST00000471178 356 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 RPL36AP48-201ENST00000485521 314 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.23□□□□□ -2.37
SPTA1P02549 RNU6-491P-201ENST00000516099 110 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 AP003066.2-201ENST00000529375 555 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 AC005832.3-201ENST00000537929 631 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 AL022345.1-201ENST00000607292 135 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 AP005229.2-201ENST00000609980 697 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 AC009269.6-201ENST00000621778 588 ntBASIC0.23□□□□□ -2.37
SPTA1P02549 SNORD3E-201ENST00000362899 217 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms