Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.53□□□□□ -1.84
COL3A1P02461 AC243829.7-201ENST00000633081 225 ntBASIC3.53□□□□□ -1.84
COL3A1P02461 AP006437.1-201ENST00000641440 3685 ntBASIC3.52□□□□□ -1.85
COL3A1P02461 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL3A1P02461 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
COL3A1P02461 RPL9P7-201ENST00000330965 580 ntBASIC3.52□□□□□ -1.85
COL3A1P02461 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL3A1P02461 RNU6-490P-201ENST00000362985 107 ntBASIC3.52□□□□□ -1.85
COL3A1P02461 RNU6-511P-201ENST00000363496 107 ntBASIC3.52□□□□□ -1.85
COL3A1P02461 Y_RNA.152-201ENST00000363578 100 ntBASIC3.52□□□□□ -1.85
COL3A1P02461 SNORD115-7-201ENST00000365306 82 ntBASIC3.52□□□□□ -1.85
COL3A1P02461 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.52□□□□□ -1.85
COL3A1P02461 Y_RNA.389-201ENST00000383924 113 ntBASIC3.52□□□□□ -1.85
COL3A1P02461 RNU6-890P-201ENST00000384121 107 ntBASIC3.52□□□□□ -1.85
COL3A1P02461 RNU6-1109P-201ENST00000391187 107 ntBASIC3.52□□□□□ -1.85
COL3A1P02461 RPL36AP6-201ENST00000435770 321 ntBASIC3.52□□□□□ -1.85
COL3A1P02461 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.52□□□□□ -1.85
COL3A1P02461 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.52□□□□□ -1.85
COL3A1P02461 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.52□□□□□ -1.85
COL3A1P02461 AC116655.1-201ENST00000508324 901 ntBASIC3.52□□□□□ -1.85
COL3A1P02461 AC008526.1-201ENST00000509149 338 ntBASIC3.52□□□□□ -1.85
COL3A1P02461 RNU6-1213P-201ENST00000517075 94 ntBASIC3.52□□□□□ -1.85
COL3A1P02461 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
COL3A1P02461 GNAI2P1-201ENST00000541815 315 ntBASIC3.52□□□□□ -1.85
COL3A1P02461 AC113195.1-201ENST00000579952 141 ntBASIC3.52□□□□□ -1.85
COL3A1P02461 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.52□□□□□ -1.85
COL3A1P02461 AC107871.2-201ENST00000612894 502 ntBASIC3.52□□□□□ -1.85
COL3A1P02461 MIR6128-201ENST00000615528 109 ntBASIC3.52□□□□□ -1.85
COL3A1P02461 AC103705.1-201ENST00000619013 241 ntBASIC3.52□□□□□ -1.85
COL3A1P02461 AC025034.2-201ENST00000623264 286 ntBASIC3.52□□□□□ -1.85
COL3A1P02461 AC008725.1-201ENST00000605123 2263 ntBASIC3.52□□□□□ -1.85
COL3A1P02461 AL136360.1-201ENST00000503377 1900 ntBASIC3.52□□□□□ -1.85
COL3A1P02461 ZNF519P1-201ENST00000449011 1626 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 AC005592.1-201ENST00000566527 1640 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL3A1P02461 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.51□□□□□ -1.85
COL3A1P02461 MAPK10-362ENST00000641864 4484 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 Y_RNA.307-201ENST00000365022 117 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 Y_RNA.428-201ENST00000384078 102 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 RNU6-101P-201ENST00000410323 104 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 RNU4-46P-201ENST00000410818 138 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.51□□□□□ -1.85
COL3A1P02461 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.51□□□□□ -1.85
COL3A1P02461 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.51□□□□□ -1.85
COL3A1P02461 AC008267.5-201ENST00000424928 265 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 RPL21P112-201ENST00000434403 463 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.51□□□□□ -1.85
COL3A1P02461 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.51□□□□□ -1.85
COL3A1P02461 AC087879.1-201ENST00000474343 374 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.51□□□□□ -1.85
COL3A1P02461 AC005912.1-201ENST00000495392 255 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 YWHAEP4-201ENST00000505390 198 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 AC104806.1-201ENST00000508720 308 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 RPS27AP18-201ENST00000515536 459 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 RNU6-470P-201ENST00000515954 104 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 RNU6-189P-201ENST00000516120 101 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 RNY3P15-201ENST00000516297 97 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 Y_RNA.708-201ENST00000516950 96 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 AC087854.1-201ENST00000519706 414 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.51□□□□□ -1.85
COL3A1P02461 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
COL3A1P02461 AC100870.1-201ENST00000522035 505 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.51□□□□□ -1.85
COL3A1P02461 MIR4504-201ENST00000577413 92 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 AC018889.1-201ENST00000605372 397 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 AC074140.1-201ENST00000621617 208 ntBASIC3.51□□□□□ -1.85
COL3A1P02461 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL3A1P02461 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL3A1P02461 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
COL3A1P02461 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
COL3A1P02461 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
COL3A1P02461 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL3A1P02461 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL3A1P02461 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
COL3A1P02461 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.51□□□□□ -1.85
COL3A1P02461 Y_RNA.153-201ENST00000363615 91 ntBASIC3.5□□□□□ -1.85
COL3A1P02461 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL3A1P02461 RNU6-1026P-201ENST00000384465 108 ntBASIC3.5□□□□□ -1.85
COL3A1P02461 Y_RNA.552-201ENST00000384665 112 ntBASIC3.5□□□□□ -1.85
COL3A1P02461 MIR548I3-201ENST00000408378 149 ntBASIC3.5□□□□□ -1.85
COL3A1P02461 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.5□□□□□ -1.85
COL3A1P02461 MIR548I1-201ENST00000408810 149 ntBASIC3.5□□□□□ -1.85
COL3A1P02461 AC114491.1-201ENST00000416095 246 ntBASIC3.5□□□□□ -1.85
COL3A1P02461 AC009963.1-201ENST00000417265 157 ntBASIC3.5□□□□□ -1.85
COL3A1P02461 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.5□□□□□ -1.85
COL3A1P02461 RPL7P46-201ENST00000425129 740 ntBASIC3.5□□□□□ -1.85
COL3A1P02461 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.5□□□□□ -1.85
COL3A1P02461 AL669831.1-202ENST00000428504 417 ntBASIC3.5□□□□□ -1.85
COL3A1P02461 AC104073.1-201ENST00000451988 151 ntBASIC3.5□□□□□ -1.85
COL3A1P02461 RPS24P6-201ENST00000452670 400 ntBASIC3.5□□□□□ -1.85
COL3A1P02461 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.5□□□□□ -1.85
COL3A1P02461 AC006445.2-201ENST00000510061 472 ntBASIC3.5□□□□□ -1.85
COL3A1P02461 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.5□□□□□ -1.85
COL3A1P02461 RNU6-1016P-201ENST00000516689 94 ntBASIC3.5□□□□□ -1.85
COL3A1P02461 RNU6-699P-201ENST00000517081 110 ntBASIC3.5□□□□□ -1.85
COL3A1P02461 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.5□□□□□ -1.85
COL3A1P02461 AC027176.1-201ENST00000560204 514 ntBASIC3.5□□□□□ -1.85
COL3A1P02461 MIR3186-201ENST00000577404 85 ntBASIC3.5□□□□□ -1.85
COL3A1P02461 MIR3941-201ENST00000582572 103 ntBASIC3.5□□□□□ -1.85
COL3A1P02461 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms