Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.03□□□□□ -1.92
DDX58O95786 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.03□□□□□ -1.92
DDX58O95786 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.03□□□□□ -1.92
DDX58O95786 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.03□□□□□ -1.92
DDX58O95786 AC090616.3-201ENST00000582184 217 ntBASIC3.03□□□□□ -1.92
DDX58O95786 MIR3199-1-201ENST00000582434 88 ntBASIC3.03□□□□□ -1.92
DDX58O95786 MIR3616-201ENST00000584070 92 ntBASIC3.03□□□□□ -1.92
DDX58O95786 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.03□□□□□ -1.92
DDX58O95786 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.03□□□□□ -1.92
DDX58O95786 AP000787.2-201ENST00000604432 568 ntBASIC3.03□□□□□ -1.92
DDX58O95786 AC046143.2-201ENST00000609789 160 ntBASIC3.03□□□□□ -1.92
DDX58O95786 AC011890.2-201ENST00000613393 294 ntBASIC3.03□□□□□ -1.92
DDX58O95786 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.03□□□□□ -1.92
DDX58O95786 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
DDX58O95786 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
DDX58O95786 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
DDX58O95786 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.03□□□□□ -1.92
DDX58O95786 HSPA8P4-201ENST00000511877 1920 ntBASIC3.03□□□□□ -1.92
DDX58O95786 MTND4P27-201ENST00000450813 1354 ntBASIC3.02□□□□□ -1.93
DDX58O95786 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
DDX58O95786 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
DDX58O95786 Y_RNA.409-201ENST00000383990 98 ntBASIC3.02□□□□□ -1.93
DDX58O95786 RNU6-748P-201ENST00000384648 107 ntBASIC3.02□□□□□ -1.93
DDX58O95786 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
DDX58O95786 AL513475.1-201ENST00000406602 315 ntBASIC3.02□□□□□ -1.93
DDX58O95786 RNA5SP492-201ENST00000411330 114 ntBASIC3.02□□□□□ -1.93
DDX58O95786 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.02□□□□□ -1.93
DDX58O95786 MTCYBP5-201ENST00000423752 1135 ntBASIC3.02□□□□□ -1.93
DDX58O95786 MTCO2P19-201ENST00000427513 598 ntBASIC3.02□□□□□ -1.93
DDX58O95786 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.02□□□□□ -1.93
DDX58O95786 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.02□□□□□ -1.93
DDX58O95786 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.02□□□□□ -1.93
DDX58O95786 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
DDX58O95786 AC027673.1-201ENST00000456245 405 ntBASIC3.02□□□□□ -1.93
DDX58O95786 snoU109.2-201ENST00000459316 135 ntBASIC3.02□□□□□ -1.93
DDX58O95786 AP001324.2-201ENST00000461163 319 ntBASIC3.02□□□□□ -1.93
DDX58O95786 TRBV12-1-201ENST00000479785 344 ntBASIC3.02□□□□□ -1.93
DDX58O95786 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.02□□□□□ -1.93
DDX58O95786 RPL9P6-201ENST00000492764 598 ntBASIC3.02□□□□□ -1.93
DDX58O95786 AC105417.1-201ENST00000514691 285 ntBASIC3.02□□□□□ -1.93
DDX58O95786 RNU6-1178P-201ENST00000516674 107 ntBASIC3.02□□□□□ -1.93
DDX58O95786 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.02□□□□□ -1.93
DDX58O95786 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.02□□□□□ -1.93
DDX58O95786 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.02□□□□□ -1.93
DDX58O95786 MIR4703-201ENST00000577728 79 ntBASIC3.02□□□□□ -1.93
DDX58O95786 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.02□□□□□ -1.93
DDX58O95786 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.02□□□□□ -1.93
DDX58O95786 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
DDX58O95786 AC078795.2-201ENST00000602835 1252 ntBASIC3.02□□□□□ -1.93
DDX58O95786 AC067747.1-201ENST00000608026 250 ntBASIC3.02□□□□□ -1.93
DDX58O95786 AC015540.1-201ENST00000615828 501 ntBASIC3.02□□□□□ -1.93
DDX58O95786 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.02□□□□□ -1.93
DDX58O95786 AC073534.2-201ENST00000620377 381 ntBASIC3.02□□□□□ -1.93
DDX58O95786 AC139792.3-201ENST00000623525 224 ntBASIC3.02□□□□□ -1.93
DDX58O95786 MIR6733-201ENST00000635723 61 ntBASIC3.02□□□□□ -1.93
DDX58O95786 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.02□□□□□ -1.93
DDX58O95786 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.02□□□□□ -1.93
DDX58O95786 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
DDX58O95786 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.02□□□□□ -1.93
DDX58O95786 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
DDX58O95786 MTND4P14-201ENST00000435799 1354 ntBASIC3.01□□□□□ -1.93
DDX58O95786 AC080128.1-201ENST00000474389 1917 ntBASIC3.01□□□□□ -1.93
DDX58O95786 AL359854.1-201ENST00000614203 1594 ntBASIC3.01□□□□□ -1.93
DDX58O95786 AC138393.1-203ENST00000327086 343 ntBASIC3.01□□□□□ -1.93
DDX58O95786 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
DDX58O95786 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
DDX58O95786 SNORD114-30-201ENST00000364448 72 ntBASIC3.01□□□□□ -1.93
DDX58O95786 SNORA75B-201ENST00000384053 137 ntBASIC3.01□□□□□ -1.93
DDX58O95786 U3.37-201ENST00000408528 213 ntBASIC3.01□□□□□ -1.93
DDX58O95786 AC016831.2-201ENST00000417179 352 ntBASIC3.01□□□□□ -1.93
DDX58O95786 AC000111.3-201ENST00000433478 193 ntBASIC3.01□□□□□ -1.93
DDX58O95786 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.01□□□□□ -1.93
DDX58O95786 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.01□□□□□ -1.93
DDX58O95786 FTH1P25-201ENST00000447665 469 ntBASIC3.01□□□□□ -1.93
DDX58O95786 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.01□□□□□ -1.93
DDX58O95786 MTAPP1-201ENST00000489154 819 ntBASIC3.01□□□□□ -1.93
DDX58O95786 MTND2P33-201ENST00000506452 1031 ntBASIC3.01□□□□□ -1.93
DDX58O95786 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.01□□□□□ -1.93
DDX58O95786 AC023141.11-201ENST00000508864 202 ntBASIC3.01□□□□□ -1.93
DDX58O95786 AC008549.1-201ENST00000512900 643 ntBASIC3.01□□□□□ -1.93
DDX58O95786 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.01□□□□□ -1.93
DDX58O95786 RNU1-41P-201ENST00000516161 162 ntBASIC3.01□□□□□ -1.93
DDX58O95786 RNU1-48P-201ENST00000516400 162 ntBASIC3.01□□□□□ -1.93
DDX58O95786 RPPH1-2P-201ENST00000516688 293 ntBASIC3.01□□□□□ -1.93
DDX58O95786 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.01□□□□□ -1.93
DDX58O95786 OR5AQ1P-201ENST00000527596 927 ntBASIC3.01□□□□□ -1.93
DDX58O95786 HSPE1P20-201ENST00000538133 289 ntBASIC3.01□□□□□ -1.93
DDX58O95786 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.01□□□□□ -1.93
DDX58O95786 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.01□□□□□ -1.93
DDX58O95786 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.01□□□□□ -1.93
DDX58O95786 AC008752.3-201ENST00000588113 712 ntBASIC3.01□□□□□ -1.93
DDX58O95786 AC008121.1-201ENST00000603244 268 ntBASIC3.01□□□□□ -1.93
DDX58O95786 AL356280.1-201ENST00000603614 379 ntBASIC3.01□□□□□ -1.93
DDX58O95786 AL354950.2-201ENST00000617939 290 ntBASIC3.01□□□□□ -1.93
DDX58O95786 uc_338.11-201ENST00000619132 160 ntBASIC3.01□□□□□ -1.93
DDX58O95786 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
DDX58O95786 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
DDX58O95786 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
DDX58O95786 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3□□□□□ -1.93
DDX58O95786 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms