Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 Y_RNA.480-201ENST00000384364 102 ntBASIC2.69□□□□□ -1.98
PRKNO60260 RNU6-1035P-201ENST00000384477 107 ntBASIC2.69□□□□□ -1.98
PRKNO60260 RNU1-101P-201ENST00000391171 127 ntBASIC2.69□□□□□ -1.98
PRKNO60260 SAR1AP2-201ENST00000392696 594 ntBASIC2.69□□□□□ -1.98
PRKNO60260 RPL21P3-201ENST00000395517 478 ntBASIC2.69□□□□□ -1.98
PRKNO60260 RNU2-3P-201ENST00000410144 191 ntBASIC2.69□□□□□ -1.98
PRKNO60260 RNU6-607P-201ENST00000411283 108 ntBASIC2.69□□□□□ -1.98
PRKNO60260 CYCSP33-201ENST00000414485 327 ntBASIC2.69□□□□□ -1.98
PRKNO60260 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.69□□□□□ -1.98
PRKNO60260 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.69□□□□□ -1.98
PRKNO60260 MTND4LP16-201ENST00000440828 295 ntBASIC2.69□□□□□ -1.98
PRKNO60260 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.69□□□□□ -1.98
PRKNO60260 AC146507.2-201ENST00000460608 476 ntBASIC2.69□□□□□ -1.98
PRKNO60260 HMGB1P30-201ENST00000492455 606 ntBASIC2.69□□□□□ -1.98
PRKNO60260 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.69□□□□□ -1.98
PRKNO60260 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.69□□□□□ -1.98
PRKNO60260 MTND3P22-201ENST00000510932 243 ntBASIC2.69□□□□□ -1.98
PRKNO60260 MIR892C-201ENST00000516410 77 ntBASIC2.69□□□□□ -1.98
PRKNO60260 RNU6-1069P-201ENST00000516612 133 ntBASIC2.69□□□□□ -1.98
PRKNO60260 SNORA25.17-201ENST00000517184 124 ntBASIC2.69□□□□□ -1.98
PRKNO60260 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.69□□□□□ -1.98
PRKNO60260 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.69□□□□□ -1.98
PRKNO60260 LRRC37A5P-203ENST00000580181 585 ntBASIC2.69□□□□□ -1.98
PRKNO60260 MIR5692C1-201ENST00000585309 91 ntBASIC2.69□□□□□ -1.98
PRKNO60260 AL117336.2-201ENST00000602435 335 ntBASIC2.69□□□□□ -1.98
PRKNO60260 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.69□□□□□ -1.98
PRKNO60260 HSPE1P7-201ENST00000604681 321 ntBASIC2.69□□□□□ -1.98
PRKNO60260 AC007938.3-201ENST00000604965 623 ntBASIC2.69□□□□□ -1.98
PRKNO60260 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.69□□□□□ -1.98
PRKNO60260 AC022140.2-201ENST00000623500 188 ntBASIC2.69□□□□□ -1.98
PRKNO60260 U6.99-201ENST00000637524 83 ntBASIC2.69□□□□□ -1.98
PRKNO60260 MTND4P29-201ENST00000503122 1372 ntBASIC2.69□□□□□ -1.98
PRKNO60260 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PRKNO60260 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PRKNO60260 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.69□□□□□ -1.98
PRKNO60260 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
PRKNO60260 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PRKNO60260 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.68□□□□□ -1.98
PRKNO60260 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
PRKNO60260 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PRKNO60260 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PRKNO60260 RNU6-884P-201ENST00000363889 107 ntBASIC2.68□□□□□ -1.98
PRKNO60260 RNU6-694P-201ENST00000364071 147 ntBASIC2.68□□□□□ -1.98
PRKNO60260 RNU6-270P-201ENST00000364131 105 ntBASIC2.68□□□□□ -1.98
PRKNO60260 RNU6-1013P-201ENST00000384180 107 ntBASIC2.68□□□□□ -1.98
PRKNO60260 SNORA1.3-201ENST00000384676 136 ntBASIC2.68□□□□□ -1.98
PRKNO60260 MT-TD-201ENST00000387419 68 ntBASIC2.68□□□□□ -1.98
PRKNO60260 MIR450B-201ENST00000401182 78 ntBASIC2.68□□□□□ -1.98
PRKNO60260 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.68□□□□□ -1.98
PRKNO60260 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.68□□□□□ -1.98
PRKNO60260 AL590664.1-201ENST00000448065 339 ntBASIC2.68□□□□□ -1.98
PRKNO60260 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.68□□□□□ -1.98
PRKNO60260 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.68□□□□□ -1.98
PRKNO60260 AC104472.2-201ENST00000469035 601 ntBASIC2.68□□□□□ -1.98
PRKNO60260 RPL30P14-201ENST00000482744 348 ntBASIC2.68□□□□□ -1.98
PRKNO60260 TRBVA-201ENST00000498804 316 ntBASIC2.68□□□□□ -1.98
PRKNO60260 AC083906.5-201ENST00000503722 328 ntBASIC2.68□□□□□ -1.98
PRKNO60260 AC097462.2-201ENST00000504623 481 ntBASIC2.68□□□□□ -1.98
PRKNO60260 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.68□□□□□ -1.98
PRKNO60260 RNU6-256P-201ENST00000516747 97 ntBASIC2.68□□□□□ -1.98
PRKNO60260 RNU6-1088P-201ENST00000516850 104 ntBASIC2.68□□□□□ -1.98
PRKNO60260 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.68□□□□□ -1.98
PRKNO60260 AC105029.1-201ENST00000520250 669 ntBASIC2.68□□□□□ -1.98
PRKNO60260 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.68□□□□□ -1.98
PRKNO60260 CYCSP27-201ENST00000527643 293 ntBASIC2.68□□□□□ -1.98
PRKNO60260 AP000889.2-201ENST00000532684 490 ntBASIC2.68□□□□□ -1.98
PRKNO60260 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.68□□□□□ -1.98
PRKNO60260 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.68□□□□□ -1.98
PRKNO60260 RPS3AP23-202ENST00000574601 686 ntBASIC2.68□□□□□ -1.98
PRKNO60260 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.68□□□□□ -1.98
PRKNO60260 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.68□□□□□ -1.98
PRKNO60260 MIR3672-201ENST00000584290 82 ntBASIC2.68□□□□□ -1.98
PRKNO60260 C8orf59P2-201ENST00000603441 271 ntBASIC2.68□□□□□ -1.98
PRKNO60260 NUTF2P8-201ENST00000604593 363 ntBASIC2.68□□□□□ -1.98
PRKNO60260 AL138880.2-201ENST00000616214 239 ntBASIC2.68□□□□□ -1.98
PRKNO60260 MIR6076-201ENST00000617521 113 ntBASIC2.68□□□□□ -1.98
PRKNO60260 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.68□□□□□ -1.98
PRKNO60260 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.68□□□□□ -1.98
PRKNO60260 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PRKNO60260 AC092435.3-201ENST00000565538 3654 ntBASIC2.68□□□□□ -1.98
PRKNO60260 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.68□□□□□ -1.98
PRKNO60260 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
PRKNO60260 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.68□□□□□ -1.98
PRKNO60260 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.68□□□□□ -1.98
PRKNO60260 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
PRKNO60260 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.68□□□□□ -1.98
PRKNO60260 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PRKNO60260 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PRKNO60260 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.67□□□□□ -1.98
PRKNO60260 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.67□□□□□ -1.98
PRKNO60260 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
PRKNO60260 AC138393.1-203ENST00000327086 343 ntBASIC2.67□□□□□ -1.98
PRKNO60260 SNORD14B-201ENST00000364533 90 ntBASIC2.67□□□□□ -1.98
PRKNO60260 RNU6-384P-201ENST00000364900 104 ntBASIC2.67□□□□□ -1.98
PRKNO60260 Y_RNA.301-201ENST00000364990 103 ntBASIC2.67□□□□□ -1.98
PRKNO60260 Y_RNA.324-201ENST00000365165 102 ntBASIC2.67□□□□□ -1.98
PRKNO60260 SNORA9.2-201ENST00000365361 133 ntBASIC2.67□□□□□ -1.98
PRKNO60260 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
PRKNO60260 SNORA40C-201ENST00000391285 128 ntBASIC2.67□□□□□ -1.98
PRKNO60260 Y_RNA.623-201ENST00000411128 95 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms