Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 SKA2P1-201ENST00000425592 390 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 MTCO3P30-201ENST00000426425 670 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 RPL36AP53-201ENST00000432891 316 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 AL136380.1-201ENST00000447970 162 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 AC023194.1-201ENST00000493084 308 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 FAM92A1P2-202ENST00000504766 877 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 RNU7-51P-201ENST00000516560 62 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 SNORA31.15-201ENST00000516771 132 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 SNORD19.2-201ENST00000516978 73 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 OR5AL2P-201ENST00000532185 920 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 AC092325.1-201ENST00000566449 554 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 AC105137.2-201ENST00000569073 466 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 MIR5194-201ENST00000582634 120 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 MIR5007-201ENST00000583098 95 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 AP003465.2-201ENST00000602571 373 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 AC008945.2-201ENST00000606056 604 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 AC092794.1-201ENST00000612734 582 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 AC007014.2-201ENST00000615581 479 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 AC009161.2-201ENST00000624626 138 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 MIR7157-201ENST00000635801 60 ntBASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
TRIM49BA6NDI0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 MTND5P30-201ENST00000452896 1731 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 UBE2L2-201ENST00000254302 429 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 RNU6-512P-201ENST00000364438 103 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 Y_RNA.248-201ENST00000364501 109 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 RNU6-108P-201ENST00000365558 107 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 Y_RNA.390-201ENST00000383932 102 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 Y_RNA.576-201ENST00000384781 102 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 RNU2-8P-201ENST00000410727 190 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 RNU2-62P-201ENST00000410868 191 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 MTND1P23-201ENST00000416931 372 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 RAC1P6-201ENST00000423911 575 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 AC000111.3-201ENST00000433478 193 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 NEFMP1-201ENST00000443423 1006 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 TRBV1-201ENST00000476502 284 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 AC023141.11-201ENST00000508864 202 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 AC108078.2-201ENST00000510750 236 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 RNU6-123P-201ENST00000516163 102 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 RNU6-410P-201ENST00000517006 107 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 BTF3P12-201ENST00000519620 469 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 MIR3945-201ENST00000581853 98 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 BNIP3P30-201ENST00000601184 574 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 AL391813.1-201ENST00000603098 260 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 AC116312.1-201ENST00000606841 314 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 AC008536.2-201ENST00000607284 349 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 MIR3688-2-201ENST00000636963 87 ntBASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.49□□□□□ -2.01
TRIM49BA6NDI0 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 RNY1P12-201ENST00000364251 105 ntBASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 Y_RNA.450-201ENST00000384198 113 ntBASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 BTF3P7-201ENST00000407097 488 ntBASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 RNU2-39P-201ENST00000410604 198 ntBASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 AL353729.1-201ENST00000425044 720 ntBASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 MED13P1-201ENST00000428342 171 ntBASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 RPL32P28-201ENST00000443577 397 ntBASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 NFU1P2-201ENST00000448700 469 ntBASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 PSPHP1-201ENST00000450062 261 ntBASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 MTATP6P7-201ENST00000453315 681 ntBASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 GZMAP1-201ENST00000503054 631 ntBASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 SNORD27.1-201ENST00000516319 72 ntBASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 Y_RNA.693-201ENST00000516641 110 ntBASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 AP005435.4-201ENST00000529514 284 ntBASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 AC104383.1-201ENST00000530297 370 ntBASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 AL512360.1-201ENST00000555346 234 ntBASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 HMGB1P33-201ENST00000563485 527 ntBASIC2.48□□□□□ -2.01
TRIM49BA6NDI0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms