Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
LINC00862A6NCI5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
LINC00862A6NCI5 RNU4-92P-201ENST00000363783 136 ntBASIC1.17□□□□□ -2.22
LINC00862A6NCI5 RNU6-338P-201ENST00000383888 105 ntBASIC1.17□□□□□ -2.22
LINC00862A6NCI5 MIR23B-201ENST00000384832 97 ntBASIC1.17□□□□□ -2.22
LINC00862A6NCI5 MIR491-201ENST00000384877 84 ntBASIC1.17□□□□□ -2.22
LINC00862A6NCI5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
LINC00862A6NCI5 RNU6-757P-201ENST00000410334 100 ntBASIC1.17□□□□□ -2.22
LINC00862A6NCI5 SRIP3-201ENST00000413200 219 ntBASIC1.17□□□□□ -2.22
LINC00862A6NCI5 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.17□□□□□ -2.22
LINC00862A6NCI5 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.17□□□□□ -2.22
LINC00862A6NCI5 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.17□□□□□ -2.22
LINC00862A6NCI5 AL008629.1-201ENST00000438615 184 ntBASIC1.17□□□□□ -2.22
LINC00862A6NCI5 CALM1P1-201ENST00000442082 433 ntBASIC1.17□□□□□ -2.22
LINC00862A6NCI5 AL353705.4-201ENST00000449661 238 ntBASIC1.17□□□□□ -2.22
LINC00862A6NCI5 FDX1P2-201ENST00000450769 375 ntBASIC1.17□□□□□ -2.22
LINC00862A6NCI5 AC012308.1-201ENST00000451232 178 ntBASIC1.17□□□□□ -2.22
LINC00862A6NCI5 RPL23AP35-201ENST00000451906 501 ntBASIC1.17□□□□□ -2.22
LINC00862A6NCI5 AL049873.1-201ENST00000480540 376 ntBASIC1.17□□□□□ -2.22
LINC00862A6NCI5 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.17□□□□□ -2.22
LINC00862A6NCI5 AC107934.1-201ENST00000522215 217 ntBASIC1.17□□□□□ -2.22
LINC00862A6NCI5 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.17□□□□□ -2.22
LINC00862A6NCI5 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.17□□□□□ -2.22
LINC00862A6NCI5 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.17□□□□□ -2.22
LINC00862A6NCI5 AC012065.4-201ENST00000602445 679 ntBASIC1.17□□□□□ -2.22
LINC00862A6NCI5 AL022345.1-201ENST00000607292 135 ntBASIC1.17□□□□□ -2.22
LINC00862A6NCI5 AL050343.2-201ENST00000607338 280 ntBASIC1.17□□□□□ -2.22
LINC00862A6NCI5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.17□□□□□ -2.22
LINC00862A6NCI5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.16□□□□□ -2.22
LINC00862A6NCI5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.16□□□□□ -2.22
LINC00862A6NCI5 MIR424-201ENST00000362227 98 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 RNU6-1210P-201ENST00000363775 107 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 RNY4P16-201ENST00000364768 94 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 RNU6-190P-201ENST00000384154 102 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 RPS20P2-201ENST00000402520 389 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 RNU2-23P-201ENST00000410545 195 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.16□□□□□ -2.22
LINC00862A6NCI5 AL627311.1-201ENST00000431514 115 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 RPL7P54-201ENST00000438336 674 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.16□□□□□ -2.22
LINC00862A6NCI5 snoU13.14-201ENST00000459372 104 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 AC134050.1-201ENST00000495088 933 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.16□□□□□ -2.22
LINC00862A6NCI5 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.16□□□□□ -2.22
LINC00862A6NCI5 RN7SKP256-201ENST00000517201 314 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 AP003122.4-201ENST00000530980 758 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 AC018630.3-201ENST00000542637 96 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.16□□□□□ -2.22
LINC00862A6NCI5 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.16□□□□□ -2.22
LINC00862A6NCI5 MIR3198-2-201ENST00000577868 80 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.16□□□□□ -2.22
LINC00862A6NCI5 AC078795.2-201ENST00000602835 1252 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 WISP1-OT1-201ENST00000602893 642 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 AC013244.3-201ENST00000605614 388 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 AL139022.2-201ENST00000606934 443 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 AC144521.1-201ENST00000607148 956 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 AP000484.1-201ENST00000620067 1252 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.16□□□□□ -2.22
LINC00862A6NCI5 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
LINC00862A6NCI5 MTND4P16-201ENST00000466108 1367 ntBASIC1.16□□□□□ -2.22
LINC00862A6NCI5 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.15□□□□□ -2.22
LINC00862A6NCI5 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
LINC00862A6NCI5 MIR412-201ENST00000362142 91 ntBASIC1.15□□□□□ -2.23
LINC00862A6NCI5 RNY4P24-201ENST00000362735 96 ntBASIC1.15□□□□□ -2.23
LINC00862A6NCI5 RNU6-743P-201ENST00000364151 106 ntBASIC1.15□□□□□ -2.23
LINC00862A6NCI5 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
LINC00862A6NCI5 SNORD116-20-201ENST00000384529 92 ntBASIC1.15□□□□□ -2.23
LINC00862A6NCI5 RNU6-939P-201ENST00000384634 107 ntBASIC1.15□□□□□ -2.23
LINC00862A6NCI5 RNA5SP100-201ENST00000410903 110 ntBASIC1.15□□□□□ -2.23
LINC00862A6NCI5 RNA5SP59-201ENST00000410922 110 ntBASIC1.15□□□□□ -2.23
LINC00862A6NCI5 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.15□□□□□ -2.23
LINC00862A6NCI5 RPL30P13-201ENST00000418873 348 ntBASIC1.15□□□□□ -2.23
LINC00862A6NCI5 AL831737.1-201ENST00000441288 271 ntBASIC1.15□□□□□ -2.23
LINC00862A6NCI5 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC00862A6NCI5 AMD1P1-201ENST00000457220 922 ntBASIC1.15□□□□□ -2.23
LINC00862A6NCI5 USP9YP25-201ENST00000457708 443 ntBASIC1.15□□□□□ -2.23
LINC00862A6NCI5 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.15□□□□□ -2.23
LINC00862A6NCI5 RPL30P6-201ENST00000475925 342 ntBASIC1.15□□□□□ -2.23
LINC00862A6NCI5 AC112206.3-201ENST00000514578 389 ntBASIC1.15□□□□□ -2.23
LINC00862A6NCI5 RNVU1-2-201ENST00000516326 135 ntBASIC1.15□□□□□ -2.23
LINC00862A6NCI5 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.15□□□□□ -2.23
LINC00862A6NCI5 RNU6-1003P-201ENST00000517099 105 ntBASIC1.15□□□□□ -2.23
LINC00862A6NCI5 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.15□□□□□ -2.23
LINC00862A6NCI5 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.15□□□□□ -2.23
LINC00862A6NCI5 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.15□□□□□ -2.23
LINC00862A6NCI5 CYP2C61P-201ENST00000604072 290 ntBASIC1.15□□□□□ -2.23
LINC00862A6NCI5 MIR92B-201ENST00000607575 96 ntBASIC1.15□□□□□ -2.23
LINC00862A6NCI5 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.15□□□□□ -2.23
LINC00862A6NCI5 AC091834.1-201ENST00000614543 472 ntBASIC1.15□□□□□ -2.23
LINC00862A6NCI5 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.15□□□□□ -2.23
LINC00862A6NCI5 MIR1248-201ENST00000629190 106 ntBASIC1.15□□□□□ -2.23
LINC00862A6NCI5 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
LINC00862A6NCI5 ZNF680P1-201ENST00000436625 1469 ntBASIC1.14□□□□□ -2.23
LINC00862A6NCI5 SNORD14B-201ENST00000364533 90 ntBASIC1.14□□□□□ -2.23
LINC00862A6NCI5 MIR30A-201ENST00000385092 71 ntBASIC1.14□□□□□ -2.23
LINC00862A6NCI5 SNORA48.1-201ENST00000390879 135 ntBASIC1.14□□□□□ -2.23
LINC00862A6NCI5 RNA5SP390-201ENST00000410191 113 ntBASIC1.14□□□□□ -2.23
LINC00862A6NCI5 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms